| Year |
Citation |
Score |
| 2023 |
Jędrzejewska-Szmek J, Dorman DB, Blackwell KT. Making time and space for calcium control of neuron activity. Current Opinion in Neurobiology. 83: 102804. PMID 37913687 DOI: 10.1016/j.conb.2023.102804 |
0.317 |
|
| 2022 |
Dorman DB, Blackwell KT. Synaptic Plasticity Is Predicted by Spatiotemporal Firing Rate Patterns and Robust to In Vivo-like Variability. Biomolecules. 12. PMID 36291612 DOI: 10.3390/biom12101402 |
0.335 |
|
| 2021 |
Miningou Zobon NT, Jędrzejewska-Szmek J, Blackwell KT. Temporal pattern and synergy influence activity of ERK signaling pathways during L-LTP induction. Elife. 10. PMID 34374340 DOI: 10.7554/eLife.64644 |
0.313 |
|
| 2020 |
Mäki-Marttunen T, Iannella N, Edwards AG, Einevoll GT, Blackwell KT. A unified computational model for cortical post-synaptic plasticity. Elife. 9. PMID 32729828 DOI: 10.7554/Elife.55714 |
0.444 |
|
| 2020 |
Miningou N, Blackwell KT. The road to ERK activation: Do neurons take alternate routes? Cellular Signalling. 109541. PMID 31945453 DOI: 10.1016/J.Cellsig.2020.109541 |
0.459 |
|
| 2020 |
Mäki-Marttunen T, Iannella N, Edwards AG, Einevoll GT, Blackwell KT. Author response: A unified computational model for cortical post-synaptic plasticity Elife. DOI: 10.7554/Elife.55714.Sa2 |
0.368 |
|
| 2019 |
Jędrzejewska-Szmek J, Blackwell KT. From membrane receptors to protein synthesis and actin cytoskeleton: Mechanisms underlying long lasting forms of synaptic plasticity. Seminars in Cell & Developmental Biology. PMID 30634048 DOI: 10.1016/J.Semcdb.2019.01.006 |
0.449 |
|
| 2018 |
Dorman DB, Jędrzejewska-Szmek J, Blackwell KT. Inhibition enhances spatially-specific calcium encoding of synaptic input patterns in a biologically constrained model. Elife. 7. PMID 30355449 DOI: 10.7554/Elife.38588 |
0.472 |
|
| 2018 |
Jȩdrzejewski-Szmek Z, Abrahao KP, Jȩdrzejewska-Szmek J, Lovinger DM, Blackwell KT. Parameter Optimization Using Covariance Matrix Adaptation-Evolutionary Strategy (CMA-ES), an Approach to Investigate Differences in Channel Properties Between Neuron Subtypes. Frontiers in Neuroinformatics. 12: 47. PMID 30108495 DOI: 10.3389/Fninf.2018.00047 |
0.346 |
|
| 2018 |
Foncelle A, Mendes A, Jędrzejewska-Szmek J, Valtcheva S, Berry H, Blackwell KT, Venance L. Modulation of Spike-Timing Dependent Plasticity: Towards the Inclusion of a Third Factor in Computational Models. Frontiers in Computational Neuroscience. 12: 49. PMID 30018546 DOI: 10.3389/Fncom.2018.00049 |
0.432 |
|
| 2018 |
Blackwell KT, Salinas AG, Tewatia P, English B, Kotaleski JH, Lovinger DM. Molecular Mechanisms Underlying Striatal Synaptic Plasticity: Relevance to Chronic Alcohol Consumption and Seeking. The European Journal of Neuroscience. PMID 29602186 DOI: 10.1111/Ejn.13919 |
0.452 |
|
| 2018 |
Dorman DB, Jędrzejewska-Szmek J, Blackwell KT. Author response: Inhibition enhances spatially-specific calcium encoding of synaptic input patterns in a biologically constrained model Elife. DOI: 10.7554/Elife.38588.022 |
0.421 |
|
| 2017 |
Jȩdrzejewska-Szmek J, Luczak V, Abel T, Blackwell KT. β-adrenergic signaling broadly contributes to LTP induction. Plos Computational Biology. 13: e1005657. PMID 28742159 DOI: 10.1371/Journal.Pcbi.1005657 |
0.468 |
|
| 2017 |
Hawes SL, Salinas AG, Lovinger DM, Blackwell KT. Long term plasticity of corticostriatal synapses is modulated by pathway-specific co-release of opioids through kappa-opioid receptors. The Journal of Physiology. PMID 28449351 DOI: 10.1113/Jp274190 |
0.405 |
|
| 2016 |
Luczak V, Blackwell KT, Abel T, Girault JA, Gervasi N. Dendritic diameter influences the rate and magnitude of hippocampal cAMP and PKA transients during β-adrenergic receptor activation. Neurobiology of Learning and Memory. PMID 27523748 DOI: 10.1016/J.Nlm.2016.08.006 |
0.484 |
|
| 2016 |
Jędrzejewska-Szmek J, Damodaran S, Dorman DB, Blackwell KT. Calcium dynamics predict direction of synaptic plasticity in striatal spiny projection neurons. The European Journal of Neuroscience. PMID 27233469 DOI: 10.1111/Ejn.13287 |
0.463 |
|
| 2016 |
Jȩdrzejewski-Szmek Z, Blackwell KT. Asynchronous τ-leaping. The Journal of Chemical Physics. 144: 125104. PMID 27036481 DOI: 10.1063/1.4944575 |
0.308 |
|
| 2016 |
Chay A, Zamparo I, Koschinski A, Zaccolo M, Blackwell KT. Control of βAR- and N-methyl-D-aspartate (NMDA) Receptor-Dependent cAMP Dynamics in Hippocampal Neurons. Plos Computational Biology. 12: e1004735. PMID 26901880 DOI: 10.1371/Journal.Pcbi.1004735 |
0.471 |
|
| 2015 |
Hawes SL, Evans RC, Unruh BA, Benkert EE, Gillani F, Dumas TC, Blackwell KT. Multimodal Plasticity in Dorsal Striatum While Learning a Lateralized Navigation Task. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 10535-49. PMID 26203148 DOI: 10.1523/Jneurosci.4415-14.2015 |
0.359 |
|
| 2015 |
Evans RC, Blackwell KT. Calcium: amplitude, duration, or location? The Biological Bulletin. 228: 75-83. PMID 25745102 DOI: 10.1086/Bblv228N1P75 |
0.387 |
|
| 2015 |
Evans RC, Herin GA, Hawes SL, Blackwell KT. Calcium-dependent inactivation of calcium channels in the medial striatum increases at eye opening. Journal of Neurophysiology. 113: 2979-86. PMID 25673739 DOI: 10.1152/Jn.00818.2014 |
0.397 |
|
| 2015 |
Damodaran S, Cressman JR, Jedrzejewski-Szmek Z, Blackwell KT. Desynchronization of fast-spiking interneurons reduces β-band oscillations and imbalance in firing in the dopamine-depleted striatum. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 1149-59. PMID 25609629 DOI: 10.1523/Jneurosci.3490-14.2015 |
0.329 |
|
| 2014 |
Nair AG, Gutierrez-Arenas O, Eriksson O, Jauhiainen A, Blackwell KT, Kotaleski JH. Modeling intracellular signaling underlying striatal function in health and disease. Progress in Molecular Biology and Translational Science. 123: 277-304. PMID 24560149 DOI: 10.1016/B978-0-12-397897-4.00013-9 |
0.379 |
|
| 2014 |
Damodaran S, Evans RC, Blackwell KT. Synchronized firing of fast-spiking interneurons is critical to maintain balanced firing between direct and indirect pathway neurons of the striatum. Journal of Neurophysiology. 111: 836-48. PMID 24304860 DOI: 10.1152/Jn.00382.2013 |
0.334 |
|
| 2014 |
Jędrzejewska-Szmek J, Chay A, Blackwell KT. Molecular dependence of hippocampal bidirectional plasticity Bmc Neuroscience. 15. DOI: 10.1186/1471-2202-15-S1-P204 |
0.494 |
|
| 2013 |
Blackwell KT, Jedrzejewska-Szmek J. Molecular mechanisms underlying neuronal synaptic plasticity: systems biology meets computational neuroscience in the wilds of synaptic plasticity. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 5: 717-31. PMID 24019266 DOI: 10.1002/Wsbm.1240 |
0.501 |
|
| 2013 |
Hawes SL, Gillani F, Evans RC, Benkert EA, Blackwell KT. Sensitivity to theta-burst timing permits LTP in dorsal striatal adult brain slice. Journal of Neurophysiology. 110: 2027-36. PMID 23926032 DOI: 10.1152/Jn.00115.2013 |
0.427 |
|
| 2013 |
Evans RC, Maniar YM, Blackwell KT. Dynamic modulation of spike timing-dependent calcium influx during corticostriatal upstates. Journal of Neurophysiology. 110: 1631-45. PMID 23843436 DOI: 10.1152/Jn.00232.2013 |
0.412 |
|
| 2013 |
Blackwell KT. Approaches and tools for modeling signaling pathways and calcium dynamics in neurons Journal of Neuroscience Methods. 220: 131-140. PMID 23743449 DOI: 10.1016/J.Jneumeth.2013.05.008 |
0.462 |
|
| 2013 |
Kim B, Hawes SL, Gillani F, Wallace LJ, Blackwell KT. Signaling pathways involved in striatal synaptic plasticity are sensitive to temporal pattern and exhibit spatial specificity. Plos Computational Biology. 9: e1002953. PMID 23516346 DOI: 10.1371/Journal.Pcbi.1002953 |
0.537 |
|
| 2013 |
Blackwell KT, Wallace LJ, Kim B, Oliveira RF, Koh W. Modeling spatial aspects of intracellular dopamine signaling. Methods in Molecular Biology (Clifton, N.J.). 964: 61-75. PMID 23296778 DOI: 10.1007/978-1-62703-251-3_5 |
0.418 |
|
| 2013 |
Damodaran S, Blackwell KT. Intrinsic and network mechanisms involved in balanced firing and striatal synchrony during dopamine depletion Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P27 |
0.371 |
|
| 2012 |
Evans RC, Morera-Herreras T, Cui Y, Du K, Sheehan T, Kotaleski JH, Venance L, Blackwell KT. The effects of NMDA subunit composition on calcium influx and spike timing-dependent plasticity in striatal medium spiny neurons. Plos Computational Biology. 8: e1002493. PMID 22536151 DOI: 10.1371/Journal.Pcbi.1002493 |
0.458 |
|
| 2012 |
Oliveira RF, Kim M, Blackwell KT. Subcellular location of PKA controls striatal plasticity: stochastic simulations in spiny dendrites. Plos Computational Biology. 8: e1002383. PMID 22346744 DOI: 10.1371/Journal.Pcbi.1002383 |
0.655 |
|
| 2011 |
Kim M, Park AJ, Havekes R, Chay A, Guercio LA, Oliveira RF, Abel T, Blackwell KT. Colocalization of protein kinase A with adenylyl cyclase enhances protein kinase A activity during induction of long-lasting long-term-potentiation. Plos Computational Biology. 7: e1002084. PMID 21738458 DOI: 10.1371/Journal.Pcbi.1002084 |
0.632 |
|
| 2011 |
Koh W, Blackwell KT. An accelerated algorithm for discrete stochastic simulation of reaction-diffusion systems using gradient-based diffusion and tau-leaping. The Journal of Chemical Physics. 134: 154103. PMID 21513371 DOI: 10.1063/1.3572335 |
0.302 |
|
| 2010 |
Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML. Postsynaptic signal transduction models for long-term potentiation and depression. Frontiers in Computational Neuroscience. 4: 152. PMID 21188161 DOI: 10.3389/Fncom.2010.00152 |
0.418 |
|
| 2010 |
Oliveira RF, Terrin A, Di Benedetto G, Cannon RC, Koh W, Kim M, Zaccolo M, Blackwell KT. The role of type 4 phosphodiesterases in generating microdomains of cAMP: large scale stochastic simulations. Plos One. 5: e11725. PMID 20661441 DOI: 10.1371/Journal.Pone.0011725 |
0.643 |
|
| 2010 |
Kotaleski JH, Blackwell KT. Modelling the molecular mechanisms of synaptic plasticity using systems biology approaches. Nature Reviews. Neuroscience. 11: 239-51. PMID 20300102 DOI: 10.1038/Nrn2807 |
0.43 |
|
| 2010 |
Kim M, Huang T, Abel T, Blackwell KT. Temporal sensitivity of protein kinase a activation in late-phase long term potentiation. Plos Computational Biology. 6: e1000691. PMID 20195498 DOI: 10.1371/Journal.Pcbi.1000691 |
0.635 |
|
| 2010 |
Koh W, Blackwell KT. An Accelerated Algorithm for Stochastic Simulation of Reaction-Diffusion Systems using Gradient-Based Diffusion and Unified Tau-Leaping Biophysical Journal. 98: 739a. DOI: 10.1016/J.Bpj.2009.12.4054 |
0.306 |
|
| 2009 |
Hjorth J, Blackwell KT, Kotaleski JH. Gap junctions between striatal fast-spiking interneurons regulate spiking activity and synchronization as a function of cortical activity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 5276-86. PMID 19386924 DOI: 10.1523/Jneurosci.6031-08.2009 |
0.413 |
|
| 2009 |
Kim M, Oliveira R, Koh W, Blackwell K. Temporal sensitivity of protein kinase A activation in a stochastic reaction-diffusion model of late phase long term potentiation Bmc Neuroscience. 10: P202. DOI: 10.1186/1471-2202-10-S1-P202 |
0.645 |
|
| 2008 |
Ferrante M, Blackwell KT, Migliore M, Ascoli GA. Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Current Medicinal Chemistry. 15: 2456-71. PMID 18855673 DOI: 10.2174/092986708785909094 |
0.422 |
|
| 2008 |
Blackwell KT. Signaling pathways underlying striatal synaptic plasticity and reward learning Bmc Neuroscience. 9. DOI: 10.1186/1471-2202-9-S1-L3 |
0.407 |
|
| 2006 |
Lindskog M, Kim M, Wikström MA, Blackwell KT, Kotaleski JH. Transient calcium and dopamine increase PKA activity and DARPP-32 phosphorylation. Plos Computational Biology. 2: e119. PMID 16965177 DOI: 10.1371/Journal.Pcbi.0020119 |
0.656 |
|
| 2006 |
Blackwell KT. An efficient stochastic diffusion algorithm for modeling second messengers in dendrites and spines. Journal of Neuroscience Methods. 157: 142-53. PMID 16687175 DOI: 10.1016/J.Jneumeth.2006.04.003 |
0.379 |
|
| 2006 |
Blackwell KT. Subcellular, cellular, and circuit mechanisms underlying classical conditioning in Hermissenda crassicornis. Anatomical Record. Part B, New Anatomist. 289: 25-37. PMID 16437555 DOI: 10.1002/Ar.B.20090 |
0.448 |
|
| 2006 |
Blackwell KT. Ionic currents underlying difference in light response between type A and type B photoreceptors. Journal of Neurophysiology. 95: 3060-72. PMID 16394075 DOI: 10.1152/Jn.00780.2005 |
0.321 |
|
| 2006 |
Gustafson N, Gireesh-Dharmaraj E, Czubayko U, Blackwell KT, Plenz D. A comparative voltage and current-clamp analysis of feedback and feedforward synaptic transmission in the striatal microcircuit in vitro. Journal of Neurophysiology. 95: 737-52. PMID 16236782 DOI: 10.1152/Jn.00802.2005 |
0.38 |
|
| 2006 |
Kotaleski JH, Plenz D, Blackwell KT. Using potassium currents to solve signal-to-noise problems in inhibitory feedforward networks of the striatum. Journal of Neurophysiology. 95: 331-41. PMID 16192340 DOI: 10.1152/Jn.00063.2005 |
0.403 |
|
| 2005 |
Kotaleski JH, Plenz D, Blackwell KT. The role of background synaptic noise in striatal fast spiking interneurons Neurocomputing. 65: 727-732. DOI: 10.1016/J.Neucom.2004.10.068 |
0.389 |
|
| 2004 |
Blackwell KT. Paired turbulence and light do not produce a supralinear calcium increase in Hermissenda. Journal of Computational Neuroscience. 17: 81-99. PMID 15218355 DOI: 10.1023/B:Jcns.0000023866.88225.03 |
0.397 |
|
| 2003 |
Blackwell KT, Czubayko U, Plenz D. Quantitative estimate of synaptic inputs to striatal neurons during up and down states in vitro. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 9123-32. PMID 14534246 DOI: 10.1523/Jneurosci.23-27-09123.2003 |
0.383 |
|
| 2002 |
Hellgren Kotaleski J, Lester D, Blackwell KT. Subcellular interactions between parallel fibre and climbing fibre signals in purkinje cells predict sensitivity of classical conditioning to interstimulus interval Integrative Physiological and Behavioral Science. 37: 265-292. PMID 12645844 DOI: 10.1007/Bf02734249 |
0.351 |
|
| 2002 |
Blackwell KT. Calcium waves and closure of potassium channels in response to GABA stimulation in Hermissenda type B photoreceptors. Journal of Neurophysiology. 87: 776-92. PMID 11826046 DOI: 10.1152/Jn.00867.2000 |
0.368 |
|
| 2002 |
Kotaleski JH, Blackwell KT. Sensitivity to interstimulus interval due to calcium interactions in the Purkinje cell spines Neurocomputing. 44: 13-18. DOI: 10.1016/S0925-2312(02)00361-2 |
0.32 |
|
| 2001 |
Yang KH, Hellgren Kotaleski J, Blackwell KT. The role of protein kinase C in the biochemical pathways of classical conditioning Neurocomputing. 38: 79-85. DOI: 10.1016/S0925-2312(01)00488-X |
0.58 |
|
| 2001 |
Blackwell KT. Propagation of calcium waves in the Hermissenda type B photoreceptor Neurocomputing. 38: 1-7. DOI: 10.1016/S0925-2312(01)00346-0 |
0.325 |
|
| 2000 |
Yang KH, Blackwell KT. Analogue pattern matching in a dendritic spine model based on phosphorylation of potassium channels. Network (Bristol, England). 11: 281-97. PMID 11128168 DOI: 10.1088/0954-898X_11_4_303 |
0.621 |
|
| 2000 |
Blackwell KT. Evidence for a distinct light-induced calcium-dependent potassium current in Hermissenda crassicornis. Journal of Computational Neuroscience. 9: 149-70. PMID 11030519 DOI: 10.1023/A:1008919924579 |
0.351 |
|
| 2000 |
Blackwell KT. Characterization of the light-induced currents in Hermissenda Neurocomputing. 32: 45-49. DOI: 10.1016/S0925-2312(00)00142-9 |
0.321 |
|
| 1999 |
Blackwell KT, Alkon DL. Ryanodine receptor modulation of in vitro associative learning in Hermissenda crassicornis. Brain Research. 822: 114-25. PMID 10082889 DOI: 10.1016/S0006-8993(99)01105-1 |
0.386 |
|
| 1999 |
Blackwell KT. Dynamics of the light-induced current in Hermissenda Neurocomputing. 26: 61-67. DOI: 10.1016/S0925-2312(99)00007-7 |
0.303 |
|
| 1998 |
Blackwell KT, Vogl TP, Alkon DL. Pattern matching in a model of dendritic spines. Network (Bristol, England). 9: 107-21. PMID 9861981 DOI: 10.1088/0954-898X_9_1_006 |
0.428 |
|
| 1994 |
Alkon DL, Blackwell KT, Barbour GS, Werness SA, Vogl TP. Biological plausibility of synaptic associative memory models Neural Networks. 7: 1005-1017. DOI: 10.1016/S0893-6080(05)80156-X |
0.342 |
|
| 1993 |
Werness SA, Fay SD, Blackwell KT, Vogl TP, Alkon DL. Associative learning in a network model of Hermissenda crassicornis. II. Experiments. Biological Cybernetics. 69: 19-28. PMID 8334187 DOI: 10.1007/Bf00201405 |
0.35 |
|
| 1992 |
Werness SA, Fay SD, Blackwell KT, Vogl TP, Alkon DL. Associative learning in a network model of Hermissenda crassicornis. I. Theory. Biological Cybernetics. 68: 125-33. PMID 1486137 DOI: 10.1007/Bf00201434 |
0.388 |
|
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