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Michael Newton - Publications

Affiliations: 
University of Wisconsin, Madison, Madison, WI 
Area:
Statistics
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zuleger CL, Newton MA, Ma X, Ong IM, Pei Q, Albertini MR. Enrichment of melanoma-associated T cells in 6-thioguanine-resistant T cells from metastatic melanoma patients. Melanoma Research. PMID 31135600 DOI: 10.1097/Cmr.0000000000000625  0.458
2015 Gupta A, Place M, Goldstein S, Sarkar D, Zhou S, Potamousis K, Kim J, Flanagan C, Li Y, Newton MA, Callander NS, Hematti P, Bresnick EH, Ma J, Asimakopoulos F, et al. Single-molecule analysis reveals widespread structural variation in multiple myeloma. Proceedings of the National Academy of Sciences of the United States of America. 112: 7689-94. PMID 26056298 DOI: 10.1073/Pnas.1418577112  0.509
2015 den Boon JA, Pyeon D, Wang SS, Horswill M, Schiffman M, Sherman M, Zuna RE, Wang Z, Hewitt SM, Pearson R, Schott M, Chung L, He Q, Lambert P, Walker J, ... Newton MA, et al. Molecular transitions from papillomavirus infection to cervical precancer and cancer: Role of stromal estrogen receptor signaling. Proceedings of the National Academy of Sciences of the United States of America. 112: E3255-64. PMID 26056290 DOI: 10.1073/Pnas.1509322112  0.697
2014 Hao L, Lindenbach B, Wang X, Dye B, Kushner D, He Q, Newton M, Ahlquist P. Genome-wide analysis of host factors in nodavirus RNA replication. Plos One. 9: e95799. PMID 24752411 DOI: 10.1371/Journal.Pone.0095799  0.549
2014 Pei Q, Zuleger CL, Macklin MD, Albertini MR, Newton MA. A conditional predictive p-value to compare a multinomial with an overdispersed multinomial in the analysis of T-cell populations. Biostatistics (Oxford, England). 15: 129-39. PMID 24096387 DOI: 10.1093/Biostatistics/Kxt039  0.469
2014 Song C, Chung L, Pan X, Zhanjun L, Ding Y, Sachdev M, Muthusami S, Gowda CS, Ge Z, Steffens S, Tan B, Kendziorski C, Newton M, Dovat S. Chromatin State Shaping the Gene Expression Profiling in the Inducible Differentiation of Promyelocytic Leukemia Cells Blood. 124: 5188-5188. DOI: 10.1182/Blood.V124.21.5188.5188  0.692
2013 Hao L, He Q, Wang Z, Craven M, Newton MA, Ahlquist P. Limited agreement of independent RNAi screens for virus-required host genes owes more to false-negative than false-positive factors. Plos Computational Biology. 9: e1003235. PMID 24068911 DOI: 10.1371/Journal.Pcbi.1003235  0.554
2013 Ray M, Goldstein S, Zhou S, Potamousis K, Sarkar D, Newton MA, Esterberg E, Kendziorski C, Bogler O, Schwartz DC. Discovery of structural alterations in solid tumor oligodendroglioma by single molecule analysis. Bmc Genomics. 14: 505. PMID 23885787 DOI: 10.1186/1471-2164-14-505  0.526
2012 Sarkar D, Goldstein S, Schwartz DC, Newton MA. Statistical significance of optical map alignments. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 19: 478-92. PMID 22506568 DOI: 10.1089/Cmb.2011.0221  0.478
2012 Newton MA, He Q, Kendziorski C. A model-based analysis to infer the functional content of a gene list. Statistical Applications in Genetics and Molecular Biology. 11. PMID 22499692 DOI: 10.2202/1544-6115.1716  0.525
2011 Gancarz BL, Hao L, He Q, Newton MA, Ahlquist P. Systematic identification of novel, essential host genes affecting bromovirus RNA replication. Plos One. 6: e23988. PMID 21915247 DOI: 10.1371/Journal.Pone.0023988  0.529
2011 Zuleger CL, Macklin MD, Bostwick BL, Pei Q, Newton MA, Albertini MR. In vivo 6-thioguanine-resistant T cells from melanoma patients have public TCR and share TCR beta amino acid sequences with melanoma-reactive T cells. Journal of Immunological Methods. 365: 76-86. PMID 21182840 DOI: 10.1016/J.Jim.2010.12.007  0.482
2010 Newton MA, Chung LM. GAMMA-BASED CLUSTERING VIA ORDERED MEANS WITH APPLICATION TO GENE-EXPRESSION ANALYSIS. Annals of Statistics. 38: 3217-3244. PMID 21113321 DOI: 10.1214/10-AOS805  0.656
2010 Teague B, Waterman MS, Goldstein S, Potamousis K, Zhou S, Reslewic S, Sarkar D, Valouev A, Churas C, Kidd JM, Kohn S, Runnheim R, Lamers C, Forrest D, Newton MA, et al. High-resolution human genome structure by single-molecule analysis. Proceedings of the National Academy of Sciences of the United States of America. 107: 10848-53. PMID 20534489 DOI: 10.1073/Pnas.0914638107  0.492
2009 Stanhope SA, Sengupta S, den Boon J, Ahlquist P, Newton MA. Statistical use of argonaute expression and RISC assembly in microRNA target identification. Plos Computational Biology. 5: e1000516. PMID 19779550 DOI: 10.1371/Journal.Pcbi.1000516  0.673
2008 Wu CY, Bird AJ, Chung LM, Newton MA, Winge DR, Eide DJ. Differential control of Zap1-regulated genes in response to zinc deficiency in Saccharomyces cerevisiae. Bmc Genomics. 9: 370. PMID 18673560 DOI: 10.1186/1471-2164-9-370  0.673
2008 Sengupta S, den Boon JA, Chen IH, Newton MA, Stanhope SA, Cheng YJ, Chen CJ, Hildesheim A, Sugden B, Ahlquist P. MicroRNA 29c is down-regulated in nasopharyngeal carcinomas, up-regulating mRNAs encoding extracellular matrix proteins. Proceedings of the National Academy of Sciences of the United States of America. 105: 5874-8. PMID 18390668 DOI: 10.1073/Pnas.0801130105  0.682
2008 Logan JA, Hoff PD, Newton MA. Two-sided estimation of mate preferences for similarities in age, education, and religion Journal of the American Statistical Association. 103: 559-569. DOI: 10.1198/016214507000000996  0.556
2006 Sengupta S, den Boon JA, Chen IH, Newton MA, Dahl DB, Chen M, Cheng YJ, Westra WH, Chen CJ, Hildesheim A, Sugden B, Ahlquist P. Genome-wide expression profiling reveals EBV-associated inhibition of MHC class I expression in nasopharyngeal carcinoma. Cancer Research. 66: 7999-8006. PMID 16912175 DOI: 10.1158/0008-5472.Can-05-4399  0.67
2005 Liu ZJ, Shah AK, Habel JE, Ng JD, Kataeva I, Xu H, Horanyi P, Yang H, Chang J, Zhao M, Huang L, Chang S, Tempel W, Chen L, Zhou W, ... ... Newton MG, et al. Salvaging Pyrococcus furiosus protein targets at SECSG. Journal of Structural and Functional Genomics. 6: 121-7. PMID 16211508 DOI: 10.1007/S10969-005-5242-X  0.465
2005 Liu ZJ, Tempel W, Ng JD, Lin D, Shah AK, Chen L, Horanyi PS, Habel JE, Kataeva IA, Xu H, Yang H, Chang JC, Huang L, Chang SH, Zhou W, ... ... Newton MG, et al. The high-throughput protein-to-structure pipeline at SECSG. Acta Crystallographica. Section D, Biological Crystallography. 61: 679-84. PMID 15930619 DOI: 10.1107/S0907444905013132  0.454
2005 Thliveris AT, Halberg RB, Clipson L, Dove WF, Sullivan R, Washington MK, Stanhope S, Newton MA. Polyclonality of familial murine adenomas: analyses of mouse chimeras with low tumor multiplicity suggest short-range interactions. Proceedings of the National Academy of Sciences of the United States of America. 102: 6960-5. PMID 15870186 DOI: 10.1073/Pnas.0502662102  0.676
2004 Newton MA, Noueiry A, Sarkar D, Ahlquist P. Detecting differential gene expression with a semiparametric hierarchical mixture method. Biostatistics (Oxford, England). 5: 155-76. PMID 15054023 DOI: 10.1093/Biostatistics/5.2.155  0.552
2000 Hartig G, Zhang J, Voytovich GM, Newton M, Chen A, Collins SP, Wu S. Fluorescent In Situ Hybridization Evaluation of p53 Gene Deletions at a Tumor Interface of Lingual Carcinoma Laryngoscope. 110: 1474-1478. PMID 10983945 DOI: 10.1097/00005537-200009000-00012  0.31
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