| Year |
Citation |
Score |
| 2019 |
Abdulhaqq SA, Martinez M, Kang G, Rodriguez IV, Nichols SM, Beaumont D, Joseph J, Azzoni L, Yin X, Wise M, Weiner D, Liu Q, Foulkes A, Münch J, Kirchhoff F, et al. Repeated semen exposure decreases cervicovaginal SIVmac251 infection in rhesus macaques. Nature Communications. 10: 3753. PMID 31434895 DOI: 10.1038/S41467-019-11814-5 |
0.389 |
|
| 2019 |
Ray EL, Qian J, Brecha R, Reilly MP, Foulkes AS. Stochastic imputation for integrated transcriptome association analysis of a longitudinally measured trait. Statistical Methods in Medical Research. 962280219852720. PMID 31172883 DOI: 10.1177/0962280219852720 |
0.357 |
|
| 2018 |
Qian J, Ray E, Brecha RL, Reilly MP, Foulkes AS. A likelihood-based approach to transcriptome association analysis. Statistics in Medicine. PMID 30515859 DOI: 10.1002/Sim.8040 |
0.362 |
|
| 2017 |
Qian J, Nunez S, Kim S, Reilly MP, Foulkes AS. A score test for genetic class-level association with nonlinear biomarker trajectories. Statistics in Medicine. PMID 28543585 DOI: 10.1002/Sim.7314 |
0.324 |
|
| 2016 |
Chen S, Nunez S, Reilly MP, Foulkes AS. Bayesian variable selection for post-analytic interrogation of susceptibility loci. Biometrics. PMID 27858978 DOI: 10.1111/Biom.12620 |
0.31 |
|
| 2016 |
Ballantyne RL, Zhang X, Nuñez S, Xue C, Zhao W, Reed E, Salaheen D, Foulkes AS, Li M, Reilly MP. Genome-wide interrogation reveals hundreds of long intergenic noncoding RNAs that associate with cardiometabolic traits. Human Molecular Genetics. PMID 27288454 DOI: 10.1093/Hmg/Ddw154 |
0.316 |
|
| 2015 |
Abdulhaqq SA, Zorrilla C, Kang G, Yin X, Tamayo V, Seaton KE, Joseph J, Garced S, Tomaras GD, Linn KA, Foulkes AS, Azzoni L, VerMilyea M, Coutifaris C, Kossenkov AV, et al. HIV-1-negative female sex workers sustain high cervical IFNɛ, low immune activation, and low expression of HIV-1-required host genes. Mucosal Immunology. PMID 26555708 DOI: 10.1038/Mi.2015.116 |
0.402 |
|
| 2015 |
Papasavvas E, Foulkes A, Yin X, Joseph J, Ross B, Azzoni L, Kostman JR, Mounzer K, Shull J, Montaner LJ. Plasmacytoid dendritic cell and functional HIV Gag p55-specific T cells before treatment interruption can inform set-point plasma HIV viral load after treatment interruption in chronically suppressed HIV-1(+) patients. Immunology. 145: 380-90. PMID 25684333 DOI: 10.1111/Imm.12452 |
0.416 |
|
| 2015 |
Matthews GJ, Foulkes AS. MixMAP: AnRPackage for Mixed Modeling of Meta-AnalysispValues in Genetic Association Studies Journal of Statistical Software. 66. DOI: 10.18637/Jss.V066.C03 |
0.328 |
|
| 2014 |
Abdulhaqq SA, Martinez MI, Kang G, Foulkes AS, Rodriguez IV, Nichols SM, Hunter M, Sariol CA, Ruiz LA, Ross BN, Yin X, Speicher DW, Haase AT, Marx PA, Li Q, et al. Serial cervicovaginal exposures with replication-deficient SIVsm induce higher dendritic cell (pDC) and CD4+ T-cell infiltrates not associated with prevention but a more severe SIVmac251 infection of rhesus macaques. Journal of Acquired Immune Deficiency Syndromes (1999). 65: 405-13. PMID 24226059 DOI: 10.1097/Qai.0000000000000047 |
0.304 |
|
| 2013 |
Azzoni L, Foulkes AS, Papasavvas E, Mexas AM, Lynn KM, Mounzer K, Tebas P, Jacobson JM, Frank I, O'Doherty U, Kostman J, Montaner LJ. Improved treatment for primary HIV infection by interferon-alfa therapy? Does HCV treatment in HIV/HCV coinfected patients help us to test this hypothesis? Reply to zur Wiesch and van Lunzen. The Journal of Infectious Diseases. 208: 363. PMID 23570845 DOI: 10.1093/Infdis/Jit160 |
0.332 |
|
| 2013 |
Foulkes AS, Matthews GJ, Das U, Ferguson JF, Lin R, Reilly MP. Mixed modeling of meta-analysis P-values (MixMAP) suggests multiple novel gene loci for low density lipoprotein cholesterol. Plos One. 8: e54812. PMID 23405096 DOI: 10.1371/Journal.Pone.0054812 |
0.349 |
|
| 2013 |
Azzoni L, Foulkes AS, Papasavvas E, Mexas AM, Lynn KM, Mounzer K, Tebas P, Jacobson JM, Frank I, Busch MP, Deeks SG, Carrington M, O'Doherty U, Kostman J, Montaner LJ. Pegylated Interferon alfa-2a monotherapy results in suppression of HIV type 1 replication and decreased cell-associated HIV DNA integration. The Journal of Infectious Diseases. 207: 213-22. PMID 23105144 DOI: 10.1093/Infdis/Jis663 |
0.368 |
|
| 2012 |
Mexas AM, Graf EH, Pace MJ, Yu JJ, Papasavvas E, Azzoni L, Busch MP, Di Mascio M, Foulkes AS, Migueles SA, Montaner LJ, O'Doherty U. Concurrent measures of total and integrated HIV DNA monitor reservoirs and ongoing replication in eradication trials. Aids (London, England). 26: 2295-306. PMID 23014521 DOI: 10.1097/Qad.0B013E32835A5C2F |
0.367 |
|
| 2012 |
Azzoni L, Foulkes AS, Liu Y, Li X, Johnson M, Smith C, Kamarulzaman AB, Montaner J, Mounzer K, Saag M, Cahn P, Cesar C, Krolewiecki A, Sanne I, Montaner LJ. Prioritizing CD4 count monitoring in response to ART in resource-constrained settings: a retrospective application of prediction-based classification. Plos Medicine. 9: e1001207. PMID 22529752 DOI: 10.1371/Journal.Pmed.1001207 |
0.432 |
|
| 2012 |
Azzoni L, Foulkes AS, Firnhaber C, Yin X, Xiang ZQ, Li Y, Stevens W, Gross R, Ertl HC, Sanne I, Montaner LJ. Antiretroviral therapy interruptions result in loss of protective humoral immunity to neoantigens in HIV-infected individuals. Aids (London, England). 26: 1355-62. PMID 22516873 DOI: 10.1097/Qad.0B013E328354648E |
0.385 |
|
| 2011 |
Au K, Lin R, Foulkes AS. Mixture modelling as an exploratory framework for genotype-trait associations. Journal of the Royal Statistical Society. Series C, Applied Statistics. 60: 355-375. PMID 22368304 DOI: 10.1111/J.1467-9876.2010.00750.X |
0.356 |
|
| 2011 |
Eliot M, Ferguson J, Reilly MP, Foulkes AS. Ridge regression for longitudinal biomarker data. The International Journal of Biostatistics. 7: Article 37. PMID 22049265 DOI: 10.2202/1557-4679.1353 |
0.544 |
|
| 2011 |
Liu Y, Foulkes AS. Latent variable modeling paradigms for genotype-trait association studies. Biometrical Journal. Biometrische Zeitschrift. 53: 838-54. PMID 21887796 DOI: 10.1002/bimj.201000218 |
0.305 |
|
| 2011 |
Conradie F, Foulkes AS, Ive P, Yin X, Roussos K, Glencross DK, Lawrie D, Stevens W, Montaner LJ, Sanne I, Azzoni L. Natural killer cell activation distinguishes Mycobacterium tuberculosis-mediated immune reconstitution syndrome from chronic HIV and HIV/MTB coinfection. Journal of Acquired Immune Deficiency Syndromes (1999). 58: 309-18. PMID 21826013 DOI: 10.1097/Qai.0B013E31822E0D15 |
0.38 |
|
| 2011 |
Azzoni L, Foulkes AS, Firnhaber C, Yin X, Crowther NJ, Glencross D, Lawrie D, Stevens W, Papasavvas E, Sanne I, Montaner LJ. Metabolic and anthropometric parameters contribute to ART-mediated CD4+ T cell recovery in HIV-1-infected individuals: an observational study. Journal of the International Aids Society. 14: 37. PMID 21801351 DOI: 10.1186/1758-2652-14-37 |
0.385 |
|
| 2011 |
Foulkes AS, Au K. R statistical tools for gene discovery. Methods in Molecular Biology (Clifton, N.J.). 760: 73-90. PMID 21779991 DOI: 10.1007/978-1-61779-176-5_5 |
0.325 |
|
| 2011 |
Firnhaber C, Azzoni L, Foulkes AS, Gross R, Yin X, Van Amsterdam D, Schulze D, Glencross DK, Stevens W, Hunt G, Morris L, Fox L, Sanne I, Montaner LJ. Randomized trial of time-limited interruptions of protease inhibitor-based antiretroviral therapy (ART) vs. continuous therapy for HIV-1 infection. Plos One. 6: e21450. PMID 21738668 DOI: 10.1371/Journal.Pone.0021450 |
0.352 |
|
| 2010 |
Foulkes AS, Azzoni L, Li X, Johnson MA, Smith C, Mounzer K, Montaner LJ. Prediction based classification for longitudinal biomarkers. The Annals of Applied Statistics. 4: 1476-1497. PMID 21274424 DOI: 10.1214/10-Aoas326 |
0.502 |
|
| 2010 |
Azzoni L, Crowther NJ, Firnhaber C, Foulkes AS, Yin X, Glencross D, Gross R, Kaplan MD, Papasavvas E, Schulze D, Stevens W, van der Merwe T, Waisberg R, Sanne I, Montaner LJ. Association between HIV replication and serum leptin levels: an observational study of a cohort of HIV-1-infected South African women. Journal of the International Aids Society. 13: 33. PMID 20822522 DOI: 10.1186/1758-2652-13-33 |
0.384 |
|
| 2009 |
Eliot M, Azzoni L, Firnhaber C, Stevens W, Glencross DK, Sanne I, Montaner LJ, Foulkes AS. Tree-Based Methods for Discovery of Association between Flow Cytometry Data and Clinical Endpoints. Advances in Bioinformatics. 2009: 235320. PMID 20145719 DOI: 10.1155/2009/235320 |
0.566 |
|
| 2009 |
Li X, Thomas BN, Rich SM, Ecker D, Tumwine JK, Foulkes AS. Estimating and testing haplotype-trait associations in non-diploid populations. Journal of the Royal Statistical Society. Series C, Applied Statistics. 58: 663-678. PMID 20011038 DOI: 10.1111/J.1467-9876.2009.00673.X |
0.464 |
|
| 2009 |
Mehta N, Trzmielina S, Nonyane BA, Eliot MN, Lin R, Foulkes AS, McNeal K, Ammann A, Eulalievyolo V, Sullivan JL, Luzuriaga K, Somasundaran M. Low-cost HIV-1 diagnosis and quantification in dried blood spots by real time PCR. Plos One. 4: e5819. PMID 19503790 DOI: 10.1371/Journal.Pone.0005819 |
0.559 |
|
| 2009 |
Giri MS, Nebozyhn M, Raymond A, Gekonge B, Hancock A, Creer S, Nicols C, Yousef M, Foulkes AS, Mounzer K, Shull J, Silvestri G, Kostman J, Collman RG, Showe L, et al. Circulating monocytes in HIV-1-infected viremic subjects exhibit an antiapoptosis gene signature and virus- and host-mediated apoptosis resistance. Journal of Immunology (Baltimore, Md. : 1950). 182: 4459-70. PMID 19299747 DOI: 10.4049/Jimmunol.0801450 |
0.4 |
|
| 2009 |
Papasavvas E, Foulkes A, Li X, Kostman JR, Mounzer KC, Montaner LJ. Evidence of a decrease in CD4 recovery once back on antiretroviral therapy after sequential > or =6 weeks antiretroviral therapy interruptions. Journal of Acquired Immune Deficiency Syndromes (1999). 50: 334-5. PMID 19242262 DOI: 10.1097/Qai.0B013E3181966B0C |
0.442 |
|
| 2009 |
Azzoni L, Firnhaber C, Yin X, Foulkes A, Glencross D, Stevens W, Crowther N, Papasavvas E, Sanne I, Montaner L. Metabolic parameters and cellular activation are determinant of immune reconstitution in ARV-treated HIV-1-infected South Africans Cytokine. 48: 99. DOI: 10.1016/J.Cyto.2009.07.417 |
0.357 |
|
| 2008 |
Foulkes AS, Yucel R, Li X. A likelihood-based approach to mixed modeling with ambiguity in cluster identifiers. Biostatistics (Oxford, England). 9: 635-57. PMID 18343883 DOI: 10.1093/Biostatistics/Kxm055 |
0.435 |
|
| 2007 |
Nonyane BA, Foulkes AS. Multiple imputation and random forests (MIRF) for unobservable, high-dimensional data. The International Journal of Biostatistics. 3: Article 12. PMID 22550652 DOI: 10.2202/1557-4679.1049 |
0.417 |
|
| 2007 |
Foulkes AS, DeGruttola VG. A resampling-based approach to multiple testing with uncertainty in phase. The International Journal of Biostatistics. 3: Article 2. PMID 22550644 DOI: 10.2202/1557-4679.1037 |
0.375 |
|
| 2007 |
Li X, Foulkes AS, Yucel RM, Rich SM. An expectation maximization approach to estimate malaria haplotype frequencies in multiply infected children. Statistical Applications in Genetics and Molecular Biology. 6: Article33. PMID 18052916 DOI: 10.2202/1544-6115.1321 |
0.42 |
|
| 2007 |
Chehimi J, Azzoni L, Farabaugh M, Creer SA, Tomescu C, Hancock A, Mackiewicz A, D'Alessandro L, Ghanekar S, Foulkes AS, Mounzer K, Kostman J, Montaner LJ. Baseline viral load and immune activation determine the extent of reconstitution of innate immune effectors in HIV-1-infected subjects undergoing antiretroviral treatment. Journal of Immunology (Baltimore, Md. : 1950). 179: 2642-50. PMID 17675528 DOI: 10.4049/Jimmunol.179.4.2642 |
0.368 |
|
| 2007 |
Azzoni L, Chehimi J, Zhou L, Foulkes AS, June R, Maino VC, Landay A, Rinaldo C, Jacobson LP, Montaner LJ. Early and delayed benefits of HIV-1 suppression: timeline of recovery of innate immunity effector cells. Aids (London, England). 21: 293-305. PMID 17255736 DOI: 10.1097/Qad.0B013E328012B85F |
0.32 |
|
| 2006 |
Papasavvas E, Kostman JR, Thiel B, Pistilli M, Mackiewicz A, Foulkes A, Gross R, Jordan KA, Nixon DF, Grant R, Poulin JF, McCune JM, Mounzer K, Montaner LJ. HIV-1-specific CD4+ T cell responses in chronically HIV-1 infected blippers on antiretroviral therapy in relation to viral replication following treatment interruption. Journal of Clinical Immunology. 26: 40-54. PMID 16418802 DOI: 10.1007/S10875-006-7518-8 |
0.304 |
|
| 2006 |
Foulkes AS, Wohl DA, Frank I, Puleo E, Restine S, Wolfe ML, Dube MP, Tebas P, Reilly MP. Associations among race/ethnicity, ApoC-III genotypes, and lipids in HIV-1-infected individuals on antiretroviral therapy. Plos Medicine. 3: e52. PMID 16417409 DOI: 10.1371/Journal.Pmed.0030052 |
0.4 |
|
| 2005 |
Zhao JX, Foulkes AS, George EI. Exploratory Bayesian model selection for serial genetics data. Biometrics. 61: 591-9. PMID 16011709 DOI: 10.1111/J.1541-0420.2005.040417.X |
0.349 |
|
| 2005 |
Foulkes AS, Reilly M, Zhou L, Wolfe M, Rader DJ. Mixed modelling to characterize genotype-phenotype associations. Statistics in Medicine. 24: 775-89. PMID 15696502 DOI: 10.1002/Sim.1965 |
0.325 |
|
| 2004 |
De Gruttola V, Foulkes AS. Validation and discovery in Markov models of genetics data. Statistical Applications in Genetics and Molecular Biology. 3: Article38. PMID 16646818 DOI: 10.2202/1544-6115.1104 |
0.35 |
|
| 2002 |
Foulkes AS, De GV. Characterizing the relationship between HIV-1 genotype and phenotype: prediction-based classification. Biometrics. 58: 145-56. PMID 11890310 DOI: 10.1111/j.0006-341X.2002.00145.x |
0.304 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2008 |
Nonyane BA, Foulkes AS. Application of two machine learning algorithms to genetic association studies in the presence of covariates. Bmc Genetics. 9: 71. PMID 19014573 DOI: 10.1186/1471-2156-9-71 |
0.294 |
|
| 2005 |
Reilly MP, Foulkes AS, Wolfe ML, Rader DJ. Higher order lipase gene association with plasma triglycerides. Journal of Lipid Research. 46: 1914-22. PMID 15961789 DOI: 10.1194/Jlr.M500042-Jlr200 |
0.292 |
|
| 2011 |
Papasavvas E, Azzoni L, Foulkes A, Violari A, Cotton MF, Pistilli M, Reynolds G, Yin X, Glencross DK, Stevens WS, McIntyre JA, Montaner LJ. Increased Microbial Translocation in ≤180 Days Old Perinatally Human Immunodeficiency Virus Positive Infants as Compared with Human Immunodeficiency Virus -Exposed/Uninfected Infants of Similar Age Pediatric Infectious Disease Journal. 30: 877-882. PMID 21552185 DOI: 10.1097/Inf.0B013E31821D141E |
0.289 |
|
| 2016 |
Qian J, Nunez S, Reed E, Reilly MP, Foulkes AS. A Simple Test of Class-Level Genetic Association Can Reveal Novel Cardiometabolic Trait Loci. Plos One. 11: e0148218. PMID 26859766 DOI: 10.1371/Journal.Pone.0148218 |
0.283 |
|
| 2015 |
Reed E, Nunez S, Kulp D, Qian J, Reilly MP, Foulkes AS. A guide to genome-wide association analysis and post-analytic interrogation. Statistics in Medicine. 34: 3769-92. PMID 26343929 DOI: 10.1002/Sim.6605 |
0.282 |
|
| 2003 |
Foulkes AS, De Gruttola V. Characterizing the Progression of Viral Mutations Over Time Journal of the American Statistical Association. 98: 859-867. DOI: 10.1198/016214503000000792 |
0.28 |
|
| 2004 |
Papasavvas E, Kostman JR, Mounzer K, Grant RM, Gross R, Gallo C, Azzoni L, Foulkes A, Thiel B, Pistilli M, Mackiewicz A, Shull J, Montaner LJ. Randomized, controlled trial of therapy interruption in chronic HIV-1 infection. Plos Medicine. 1. PMID 15630469 DOI: 10.1371/Journal.Pmed.0010064 |
0.276 |
|
| 2019 |
Pencina MJ, Parikh CR, Kimmel PL, Cook NR, Coresh J, Feldman HI, Foulkes A, Gimotty PA, Hsu CY, Lemley K, Song P, Wilkins K, Gossett DR, Xie Y, Star RA. Statistical methods for building better biomarkers of chronic kidney disease. Statistics in Medicine. PMID 30663113 DOI: 10.1002/Sim.8091 |
0.273 |
|
| 2014 |
Mehta NN, Matthews GJ, Krishnamoorthy P, Shah R, McLaughlin C, Patel P, Budoff M, Chen J, Wolman M, Go A, He J, Kanetsky PA, Master SR, Rader DJ, Raj D, ... ... Foulkes AS, et al. Higher plasma CXCL12 levels predict incident myocardial infarction and death in chronic kidney disease: findings from the Chronic Renal Insufficiency Cohort study. European Heart Journal. 35: 2115-22. PMID 24306482 DOI: 10.1093/Eurheartj/Eht481 |
0.26 |
|
| 2005 |
DeMichele A, Aplenc R, Botbyl J, Colligan T, Wray L, Klein-Cabral M, Foulkes A, Gimotty P, Glick J, Weber B, Stadtmauer E, Rebbeck TR. Drug-metabolizing enzyme polymorphisms predict clinical outcome in a node-positive breast cancer cohort. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 23: 5552-9. PMID 16110016 DOI: 10.1200/Jco.2005.06.208 |
0.258 |
|
| 2015 |
Shah R, Matthews GJ, Shah RY, McLaughlin C, Chen J, Wolman M, Master SR, Chai B, Xie D, Rader DJ, Raj DS, Mehta NN, Budoff M, Fischer MJ, Go AS, ... ... Foulkes AS, et al. Serum Fractalkine (CX3CL1) and Cardiovascular Outcomes and Diabetes: Findings From the Chronic Renal Insufficiency Cohort (CRIC) Study. American Journal of Kidney Diseases : the Official Journal of the National Kidney Foundation. PMID 25795074 DOI: 10.1053/J.Ajkd.2015.01.021 |
0.248 |
|
| 2008 |
Foulkes AS, Yucel R, Reilly MP. Mixed modeling and multiple imputation for unobservable genotype clusters. Statistics in Medicine. 27: 2784-801. PMID 17893946 DOI: 10.1002/Sim.3051 |
0.248 |
|
| 2006 |
Sathiyaseelan J, Goenka R, Parent M, Benson RM, Murphy EA, Fernandes DM, Foulkes AS, Baldwin CL. Treatment of Brucella-susceptible mice with IL-12 increases primary and secondary immunity. Cellular Immunology. 243: 1-9. PMID 17184756 DOI: 10.1016/J.Cellimm.2006.10.003 |
0.235 |
|
| 2003 |
Foulkes AS, DeGruttola V. Characterizing classes of antiretroviral drugs by genotype. Statistics in Medicine. 22: 2637-55. PMID 12898549 DOI: 10.1002/Sim.1465 |
0.232 |
|
| 2007 |
DeMichele A, Gimotty P, Botbyl J, Aplenc R, Colligon T, Foulkes AS, Rebbeck TR. In response to "Drug metabolizing enzyme polymorphisms predict clinical outcome in a node-positive breast cancer cohort". Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 25: 5675-7. PMID 18065748 DOI: 10.1200/Jco.2006.10.1485 |
0.231 |
|
| 2017 |
Zhang H, Xue C, Wang Y, Shi J, Zhang X, Li W, Nunez S, Foulkes AS, Lin J, Hinkle CC, Yang W, Morrisey EE, Rader DJ, Li M, Reilly MP. Deep RNA Sequencing Uncovers a Repertoire of Human Macrophage Long Intergenic Noncoding RNAs Modulated by Macrophage Activation and Associated With Cardiometabolic Diseases. Journal of the American Heart Association. 6. PMID 29133519 DOI: 10.1161/Jaha.117.007431 |
0.227 |
|
| 2008 |
Gross R, Aplenc R, Tenhave T, Foulkes AS, Thakur R, Mosepele M, Barrett JS, Flexner C, Strom BL, Bisson G. Slow efavirenz metabolism genotype is common in Botswana. Journal of Acquired Immune Deficiency Syndromes (1999). 49: 336-7. PMID 18978480 DOI: 10.1097/Qai.0B013E31817C1Ed0 |
0.226 |
|
| 2013 |
Ferguson JF, Matthews GJ, Townsend RR, Raj DS, Kanetsky PA, Budoff M, Fischer MJ, Rosas SE, Kanthety R, Rahman M, Master SR, Qasim A, Li M, Mehta NN, Shen H, ... ... Foulkes AS, et al. Candidate gene association study of coronary artery calcification in chronic kidney disease: findings from the CRIC study (Chronic Renal Insufficiency Cohort). Journal of the American College of Cardiology. 62: 789-98. PMID 23727086 DOI: 10.1016/J.Jacc.2013.01.103 |
0.225 |
|
| 2004 |
Foulkes AS, De Gruttola V. Reader Reaction Statistical Applications in Genetics and Molecular Biology. 3: 1-4. DOI: 10.2202/1544-6115.1061 |
0.224 |
|
| 2000 |
Sevin AD, DeGruttola V, Nijhuis M, Schapiro JM, Foulkes AS, Para MF, Boucher CA. Methods for investigation of the relationship between drug-susceptibility phenotype and human immunodeficiency virus type 1 genotype with applications to AIDS clinical trials group 333. The Journal of Infectious Diseases. 182: 59-67. PMID 10882582 DOI: 10.1086/315673 |
0.202 |
|
| 2005 |
Bastone L, Reilly M, Rader DJ, Foulkes AS. MDR and PRP: a comparison of methods for high-order genotype-phenotype associations. Human Heredity. 58: 82-92. PMID 15711088 DOI: 10.1159/000083029 |
0.189 |
|
| 2020 |
Foulkes AS, Azzoni L, Montaner LJ. Pre-selected class-level testing of longitudinal biomarkers reduces required multiple testing corrections to yield novel insights in longitudinal small sample human studies. Statistical Communications in Infectious Diseases. 12: 20190018. PMID 37288470 DOI: 10.1515/scid-2019-0018 |
0.185 |
|
| 2020 |
Foulkes AS, Selvaggi C, Cao T, O'Reilly ME, Cynn E, Ma P, Lumish H, Xue C, Reilly MP. Nonconserved Long Intergenic Noncoding RNAs Associate With Complex Cardiometabolic Disease Traits. Arteriosclerosis, Thrombosis, and Vascular Biology. ATVBAHA120315045. PMID 33176448 DOI: 10.1161/ATVBAHA.120.315045 |
0.18 |
|
| 2023 |
Thaweethai T, Jolley SE, Karlson EW, Levitan EB, Levy B, McComsey GA, McCorkell L, Nadkarni GN, Parthasarathy S, Singh U, Walker TA, Selvaggi CA, Shinnick DJ, Schulte CCM, Atchley-Challenner R, ... ... Foulkes AS, et al. Development of a Definition of Postacute Sequelae of SARS-CoV-2 Infection. Jama. PMID 37278994 DOI: 10.1001/jama.2023.8823 |
0.17 |
|
| 2023 |
Cao T, Reeder HT, Foulkes AS. Functional principal component analysis and sparse-group LASSO to identify associations between biomarker trajectories and mortality among hospitalized SARS-CoV-2 infected individuals. Bmc Medical Research Methodology. 23: 254. PMID 37898791 DOI: 10.1186/s12874-023-02076-3 |
0.167 |
|
| 2020 |
Foulkes AS, Balasubramanian R, Qian J, Reilly MP. Non-random sampling leads to biased estimates of transcriptome association. Scientific Reports. 10: 6193. PMID 32277087 DOI: 10.1038/s41598-020-62575-x |
0.164 |
|
| 2022 |
Cao T, O'Reilly ME, Selvaggi C, Cynn E, Lumish H, Xue C, Jha A, Reilly MP, Foulkes AS. Cis-regulated expression of non-conserved lincRNAs associates with cardiometabolic related traits. Journal of Human Genetics. PMID 35017681 DOI: 10.1038/s10038-022-01012-5 |
0.163 |
|
| 2004 |
Foulkes AS, De Gruttola V, Hertogs K. Combining genotype groups and recursive partitioning: an application to human immunodeficiency virus type 1 genetics data Journal of the Royal Statistical Society: Series C (Applied Statistics). 53: 311-323. DOI: 10.1046/j.1467-9876.2003.05094.x |
0.158 |
|
| 2021 |
Lau ES, McNeill JN, Paniagua SM, Liu EE, Wang JK, Bassett IV, Selvaggi CA, Lubitz SA, Foulkes AS, Ho JE. Sex differences in inflammatory markers in patients hospitalized with COVID-19 infection: Insights from the MGH COVID-19 patient registry. Plos One. 16: e0250774. PMID 33909684 DOI: 10.1371/journal.pone.0250774 |
0.158 |
|
| 2021 |
Memel ZN, Lee JJ, Foulkes AS, Chung RT, Thaweethai T, Bloom PP. Statins Are Associated with Improved 28-day Mortality in Patients Hospitalized with SARS-CoV-2 Infection. Medrxiv : the Preprint Server For Health Sciences. PMID 33851192 DOI: 10.1101/2021.03.27.21254373 |
0.146 |
|
| 2023 |
Thaweethai T, Foulkes AS. Postacute Sequelae of SARS-CoV-2 Infection-Reply. Jama. 330: 1492. PMID 37847276 DOI: 10.1001/jama.2023.15712 |
0.132 |
|
| 2023 |
Horwitz LI, Thaweethai T, Brosnahan SB, Cicek MS, Fitzgerald ML, Goldman JD, Hess R, Hodder SL, Jacoby VL, Jordan MR, Krishnan JA, Laiyemo AO, Metz TD, Nichols L, Patzer RE, ... ... Foulkes AS, et al. Researching COVID to Enhance Recovery (RECOVER) adult study protocol: Rationale, objectives, and design. Plos One. 18: e0286297. PMID 37352211 DOI: 10.1371/journal.pone.0286297 |
0.124 |
|
| 2016 |
Lin J, Hu Y, Nunez S, Foulkes AS, Cieply B, Xue C, Gerelus M, Li W, Zhang H, Rader DJ, Musunuru K, Li M, Reilly MP. Transcriptome-Wide Analysis Reveals Modulation of Human Macrophage Inflammatory Phenotype Through Alternative Splicing. Arteriosclerosis, Thrombosis, and Vascular Biology. PMID 27230130 DOI: 10.1161/Atvbaha.116.307573 |
0.118 |
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| 2024 |
Troxel AB, Bind MC, Flotte TJ, Cordon-Cardo C, Decker LA, Finn AV, Padera RF, Reichard RR, Stone JR, Adolphi NL, Casimero FVC, Crary JF, Elifritz J, Faustin A, Ghosh SKB, ... ... Foulkes AS, et al. Researching COVID to enhance recovery (RECOVER) tissue pathology study protocol: Rationale, objectives, and design. Plos One. 19: e0285645. PMID 38198481 DOI: 10.1371/journal.pone.0285645 |
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| 2020 |
Gu X, Tadesse MG, Foulkes AS, Ma Y, Balasubramanian R. Bayesian variable selection for high dimensional predictors and self-reported outcomes. Bmc Medical Informatics and Decision Making. 20: 212. PMID 32894123 DOI: 10.1186/s12911-020-01223-w |
0.115 |
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| 2020 |
Edlow BL, Barra ME, Zhou DW, Foulkes AS, Snider SB, Threlkeld ZD, Chakravarty S, Kirsch JE, Chan ST, Meisler SL, Bleck TP, Fins JJ, Giacino JT, Hochberg LR, Solt K, et al. Personalized Connectome Mapping to Guide Targeted Therapy and Promote Recovery of Consciousness in the Intensive Care Unit. Neurocritical Care. PMID 32794142 DOI: 10.1007/S12028-020-01062-7 |
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| 2021 |
Goehler A, Hsu TH, Seiglie JA, Siedner MJ, Lo J, Triant V, Hsu J, Foulkes A, Bassett I, Khorasani R, Wexler DJ, Szolovits P, Meigs JB, Manne-Goehler J. Visceral Adiposity and Severe COVID-19 Disease: Application of an Artificial Intelligence Algorithm to Improve Clinical Risk Prediction. Open Forum Infectious Diseases. 8: ofab275. PMID 34258315 DOI: 10.1093/ofid/ofab275 |
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| 2021 |
Moschovis PP, Lu M, Hayden D, Yonker LM, Lombay J, Taveras E, Arauz Boudreau A, Triant VA, Foulkes AS, Bassett I, Hibberd PL, Kinane TB. Effect modification by age of the association between obstructive lung diseases, smoking, and COVID-19 severity. Bmj Open Respiratory Research. 8. PMID 34740944 DOI: 10.1136/bmjresp-2021-001038 |
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| 2022 |
Selvaggi C, Harrison LJ, Kim E, Reilly MP, Foulkes AS. Signature biomarker states and mortality among hospitalized SARS-CoV-2-infected patients. Journal of Nephrology. PMID 34989977 DOI: 10.1007/s40620-021-01239-z |
0.096 |
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| 2021 |
Khurshid S, Friedman S, Reeder C, Di Achille P, Diamant N, Singh P, Harrington LX, Wang X, Al-Alusi MA, Sarma G, Foulkes AS, Ellinor PT, Anderson CD, Ho JE, Philippakis AA, et al. Electrocardiogram-based Deep Learning and Clinical Risk Factors to Predict Atrial Fibrillation. Circulation. PMID 34743566 DOI: 10.1161/CIRCULATIONAHA.121.057480 |
0.095 |
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| 2021 |
Memel ZN, Lee JJ, Foulkes AS, Chung RT, Thaweethai T, Bloom PP. Association of Statins and 28-Day Mortality in Patients Hospitalized with SARS CoV-2 Infection. The Journal of Infectious Diseases. PMID 34665852 DOI: 10.1093/infdis/jiab539 |
0.09 |
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| 2022 |
Curley WH, Bodien YG, Zhou DW, Conte MM, Foulkes AS, Giacino JT, Victor JD, Schiff ND, Edlow BL. Electrophysiological correlates of thalamocortical function in acute severe traumatic brain injury. Cortex; a Journal Devoted to the Study of the Nervous System and Behavior. 152: 136-152. PMID 35569326 DOI: 10.1016/j.cortex.2022.04.007 |
0.09 |
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| 1999 |
Christie PD, Edelberg JM, Picard MH, Foulkes AS, Mamuya W, Weiler-Guettler H, Rubin RH, Gilbert P, Rosenberg RD. A murine model of myocardial microvascular thrombosis. The Journal of Clinical Investigation. 104: 533-9. PMID 10487767 DOI: 10.1172/JCI7141 |
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| 2021 |
Fischer D, Snider SB, Barra ME, Sanders WR, Rapalino O, Schaefer P, Foulkes AS, Bodien YG, Edlow BL. Disorders of Consciousness Associated With COVID-19: A Prospective, Multimodal Study of Recovery and Brain Connectivity. Neurology. PMID 34862317 DOI: 10.1212/WNL.0000000000013067 |
0.088 |
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| 2022 |
Lumish HS, Kim E, Selvaggi C, Cao T, Gupta A, Foulkes AS, Reilly MP. Biomarkers of Cardiac Injury, Renal Injury, and Inflammation Are Strong Mediators of Sex-Associated Death in COVID-19. Frontiers in Cardiovascular Medicine. 9: 809997. PMID 35548417 DOI: 10.3389/fcvm.2022.809997 |
0.087 |
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| 2023 |
Metz TD, Clifton RG, Gallagher R, Gross RS, Horwitz LI, Jacoby VL, Martin-Herz SP, Peralta-Carcelen M, Reeder HT, Beamon CJ, Chan J, Chang AA, Costantine MM, Fitzgerald ML, Foulkes AS, et al. Researching COVID to enhance recovery (RECOVER) pregnancy study: Rationale, objectives and design. Plos One. 18: e0285351. PMID 38128008 DOI: 10.1371/journal.pone.0285351 |
0.084 |
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| 2023 |
Metz TD, Clifton RG, Gallagher R, Gross RS, Horwitz LI, Jacoby VL, Martin-Herz SP, Peralta-Carcelen M, Reeder HT, Beamon CJ, Bind MA, Chan J, Chang AA, Chibnik LB, Costantine MM, ... ... Foulkes AS, et al. Researching COVID to enhance recovery (RECOVER) pregnancy study: Rationale, objectives and design. Medrxiv : the Preprint Server For Health Sciences. PMID 37162923 DOI: 10.1101/2023.04.24.23289025 |
0.084 |
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| 2022 |
Edlow BL, Bodien YG, Baxter T, Belanger H, Cali R, Deary K, Fischl B, Foulkes AS, Gilmore N, Greve DN, Hooker JM, Huang SY, Kelemen JN, Kimberly WT, Maffei C, et al. Long-Term Effects of Repeated Blast Exposure in United States Special Operations Forces Personnel: A Pilot Study Protocol. Journal of Neurotrauma. PMID 35620901 DOI: 10.1089/neu.2022.0030 |
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| 2022 |
Maffei C, Gilmore N, Snider SB, Foulkes AS, Bodien YG, Yendiki A, Edlow BL. Automated detection of axonal damage along white matter tracts in acute severe traumatic brain injury. Neuroimage. Clinical. 37: 103294. PMID 36529035 DOI: 10.1016/j.nicl.2022.103294 |
0.08 |
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| 2022 |
Cynn E, Li D, O'Reilly ME, Wang Y, Bashore AC, Jha A, Foulkes A, Zhang H, Winter H, Maegdefessel L, Yan H, Li M, Ross L, Xue C, Reilly MP. Human Macrophage Long Intergenic Noncoding RNA, , Suppresses Inflammatory Macrophage Apoptosis via NTN1 (Netrin-1). Arteriosclerosis, Thrombosis, and Vascular Biology. PMID 36546321 DOI: 10.1161/ATVBAHA.122.318353 |
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| 2020 |
McNeill JN, Lau ES, Paniagua SM, Liu EE, Wang JK, Bassett IV, Selvaggi CA, Lubitz SA, Foulkes AS, Ho JE. The role of obesity in inflammatory markers in COVID-19 patients. Obesity Research & Clinical Practice. PMID 33390322 DOI: 10.1016/j.orcp.2020.12.004 |
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| 2021 |
Foulkes AS, Selvaggi C, Shinnick D, Lumish H, Kim E, Cao T, Thaweethai T, Qian J, Lu F, Yan J, Cheng D, He W, Clerkin KJ, Madhavan MV, Meigs JB, et al. Understanding the link between obesity and severe COVID-19 outcomes: Causal mediation by systemic inflammatory response. The Journal of Clinical Endocrinology and Metabolism. PMID 34473294 DOI: 10.1210/clinem/dgab629 |
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| 2021 |
Bunnell KM, Thaweethai T, Buckless C, Shinnick DJ, Torriani M, Foulkes AS, Bredella MA. Body composition predictors of outcome in patients with COVID-19. International Journal of Obesity (2005). PMID 34244597 DOI: 10.1038/s41366-021-00907-1 |
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| 2023 |
Gross R, Thaweethai T, Rosenzweig EB, Chan J, Chibnik LB, Cicek MS, Elliott AJ, Flaherman VJ, Foulkes AS, Witvliet MG, Gallagher R, Gennaro ML, Jernigan TL, Karlson EW, Katz SD, et al. Researching COVID to enhance recovery (RECOVER) pediatric study protocol: Rationale, objectives and design. Medrxiv : the Preprint Server For Health Sciences. PMID 37214806 DOI: 10.1101/2023.04.27.23289228 |
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| 2022 |
Foulkes AS, Selvaggi C, Shinnick D, Lumish H, Cao T, Thaweethai T, Qian J, Meigs JB, Triant VA, Bassett IV, Reilly MP. Response to Letter to the Editor From Nelson et al: "Understanding the link between obesity and severe COVID-19 outcomes: Causal mediation by systemic inflammatory response". The Journal of Clinical Endocrinology and Metabolism. PMID 36300318 DOI: 10.1210/clinem/dgac620 |
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| 2020 |
Seiglie J, Platt J, Cromer SJ, Bunda B, Foulkes AS, Bassett IV, Hsu J, Meigs JB, Leong A, Putman MS, Triant VA, Wexler DJ, Manne-Goehler J. Diabetes as a Risk Factor for Poor Early Outcomes in Patients Hospitalized With COVID-19. Diabetes Care. PMID 32847827 DOI: 10.2337/dc20-1506 |
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| 2021 |
Lubitz SA, Faranesh AZ, Atlas SJ, McManus DD, Singer DE, Pagoto S, Pantelopoulos A, Foulkes AS. Rationale and design of a large population study to validate software for the assessment of atrial fibrillation from data acquired by a consumer tracker or smartwatch: The Fitbit heart study. American Heart Journal. 238: 16-26. PMID 33865810 DOI: 10.1016/j.ahj.2021.04.003 |
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| 2023 |
Venn RA, Khurshid S, Grayson M, Ashburner JM, Al-Alusi MA, Chang Y, Foulkes A, Ellinor PT, McManus DD, Singer DE, Atlas SJ, Lubitz SA. Characteristics and Attitudes of Wearable Device Users and Nonusers in a Large Health Care System. Journal of the American Heart Association. 13: e032126. PMID 38156452 DOI: 10.1161/JAHA.123.032126 |
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| 2020 |
Snider SB, Bodien YG, Frau-Pascual A, Bianciardi M, Foulkes AS, Edlow BL. Ascending arousal network connectivity during recovery from traumatic coma. Neuroimage. Clinical. 28: 102503. PMID 33395992 DOI: 10.1016/j.nicl.2020.102503 |
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| 2022 |
Lubitz SA, Faranesh AZ, Selvaggi C, Atlas SJ, McManus DD, Singer DE, Pagoto S, McConnell MV, Pantelopoulos A, Foulkes AS. Detection of Atrial Fibrillation in a Large Population Using Wearable Devices: The Fitbit Heart Study. Circulation. 101161CIRCULATIONAHA. PMID 36148649 DOI: 10.1161/CIRCULATIONAHA.122.060291 |
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| 2020 |
Robinson LB, Fu X, Bassett IV, Triant VA, Foulkes AS, Zhang Y, Camargo CA, Blumenthal KG. COVID-19 severity in hospitalized patients with asthma: A matched cohort study. The Journal of Allergy and Clinical Immunology. in Practice. PMID 33164794 DOI: 10.1016/j.jaip.2020.10.021 |
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| 2020 |
Bassett IV, Triant VA, Bunda BA, Selvaggi CA, Shinnick DJ, He W, Lu F, Porneala BC, Cao T, Lubitz SA, Meigs JB, Hsu J, Foulkes AS. Massachusetts general hospital Covid-19 registry reveals two distinct populations of hospitalized patients by race and ethnicity. Plos One. 15: e0244270. PMID 33351826 DOI: 10.1371/journal.pone.0244270 |
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| 2020 |
Stone JH, Frigault MJ, Serling-Boyd NJ, Fernandes AD, Harvey L, Foulkes AS, Horick NK, Healy BC, Shah R, Bensaci AM, Woolley AE, Nikiforow S, Lin N, Sagar M, Schrager H, et al. Efficacy of Tocilizumab in Patients Hospitalized with Covid-19. The New England Journal of Medicine. PMID 33085857 DOI: 10.1056/NEJMoa2028836 |
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| 2021 |
Coffey BJ, Threlkeld ZD, Foulkes AS, Bodien YG, Edlow BL. Reemergence of the language network during recovery from severe traumatic brain injury: A pilot functional MRI study. Brain Injury. 1-11. PMID 34546806 DOI: 10.1080/02699052.2021.1972455 |
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| 2023 |
Venn RA, Khurshid S, Grayson M, Ashburner JM, Al-Alusi MA, Chang Y, Foulkes A, Ellinor PT, McManus DD, Singer DE, Atlas SJ, Lubitz SA. Characteristics and Attitudes of Wearable Device Users and Non-Users in a Large Healthcare System. Medrxiv : the Preprint Server For Health Sciences. PMID 37609134 DOI: 10.1101/2023.08.10.23293960 |
0.026 |
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