Omai B. Garner, Ph.D. - Publications

Affiliations: 
2007 Biomedical Sciences University of California, San Diego, La Jolla, CA 
Area:
Cell Biology, Animal Physiology Biology, Anatomy Biology

17/120 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Larkin PMK, Lawson KL, Contreras DA, Le CQ, Trejo M, Realegeno S, Hilt EE, Chandrasekaran S, Garner OB, Fishbein GA, Yang S. Amplicon-Based Next-Generation Sequencing for Detection of Fungi in Formalin-Fixed, Paraffin-Embedded Tissues: Correlation with Histopathology and Clinical Applications. The Journal of Molecular Diagnostics : Jmd. PMID 32738297 DOI: 10.1016/J.Jmoldx.2020.06.017  0.302
2020 Schoepp NG, Liaw EJ, Winnett A, Savela ES, Garner OB, Ismagilov RF. Differential DNA accessibility to polymerase enables 30-minute phenotypic β-lactam antibiotic susceptibility testing of carbapenem-resistant Enterobacteriaceae. Plos Biology. 18: e3000652. PMID 32191697 DOI: 10.1371/Journal.Pbio.3000652  0.312
2019 Joung HA, Ballard ZS, Wu J, Tseng DK, Teshome H, Zhang L, Horn EJ, Arnaboldi PM, Dattwyler RJ, Garner OB, Di Carlo D, Ozcan A. Point-of-Care Serodiagnostic Test for Early-Stage Lyme Disease Using a Multiplexed Paper-Based Immunoassay and Machine Learning. Acs Nano. PMID 31849225 DOI: 10.1021/Acsnano.9B08151  0.303
2019 Zhang Y, Ouyang M, Ray A, Liu T, Kong J, Bai B, Kim D, Guziak A, Luo Y, Feizi A, Tsai K, Duan Z, Liu X, Kim D, Cheung C, ... ... Garner OB, et al. Computational cytometer based on magnetically modulated coherent imaging and deep learning. Light, Science & Applications. 8: 91. PMID 31645935 DOI: 10.1038/S41377-019-0203-5  0.313
2019 Banerjee R, Banerjee R, Komarow L, Virk A, Rajapakse NS, Schuetz A, Dylla B, Earley M, Lok J, Kohner P, Ihde S, Cole N, Hines L, Reed K, Garner O, et al. 640. Randomized Clinical Trial Evaluating Clinical Impact of RAPid IDentification and Antimicrobial Susceptibility Testing for Gram-Negative Bacteremia (RAPIDS-GN) Open Forum Infectious Diseases. 6: S296-S297. DOI: 10.1093/Ofid/Ofz360.708  0.306
2016 Feng S, Tseng D, Di Carlo D, Garner OB, Ozcan A. High-throughput and automated diagnosis of antimicrobial resistance using a cost-effective cellphone-based micro-plate reader. Scientific Reports. 6: 39203. PMID 27976700 DOI: 10.1038/Srep39203  0.308
2016 Berg B, Cortazar B, Tseng D, Ozkan H, Feng S, Wei Q, Chan RY, Burbano J, Farooqui Q, Lewinski M, Carlo DD, Garner OB, Ozcan A. Cellphone-based hand-held microplate reader for point-of-care ELISA testing(Conference Presentation) Proceedings of Spie. 9699: 969905. DOI: 10.1117/12.2209125  0.3
2015 Garner OB, Yun T, Pernet O, Aguilar HC, Park A, Bowden TA, Freiberg AN, Lee B, Baum LG. Timing of galectin-1 exposure differentially modulates Nipah virus entry and syncytium formation in endothelial cells. Journal of Virology. 89: 2520-9. PMID 25505064 DOI: 10.1128/Jvi.02435-14  0.32
2014 Garner O, Mochon A, Branda J, Burnham CA, Bythrow M, Ferraro M, Ginocchio C, Jennemann R, Manji R, Procop GW, Richter S, Rychert J, Sercia L, Westblade L, Lewinski M. Multi-centre evaluation of mass spectrometric identification of anaerobic bacteria using the VITEK® MS system. Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases. 20: 335-9. PMID 23927597 DOI: 10.1111/1469-0691.12317  0.303
2013 Rychert J, Burnham CA, Bythrow M, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Sercia L, Westblade LF, Ferraro MJ, Branda JA. Multicenter evaluation of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Gram-positive aerobic bacteria. Journal of Clinical Microbiology. 51: 2225-31. PMID 23658261 DOI: 10.1128/Jcm.00682-13  0.304
2012 Bush KT, Crawford BE, Garner OB, Nigam KB, Esko JD, Nigam SK. N-sulfation of heparan sulfate regulates early branching events in the developing mammary gland. The Journal of Biological Chemistry. 287: 42064-70. PMID 23060443 DOI: 10.1074/Jbc.M112.423327  0.614
2011 Garner OB, Bush KT, Nigam KB, Yamaguchi Y, Xu D, Esko JD, Nigam SK. Stage-dependent regulation of mammary ductal branching by heparan sulfate and HGF-cMet signaling. Developmental Biology. 355: 394-403. PMID 21586278 DOI: 10.1016/J.Ydbio.2011.04.035  0.539
2010 Garner OB, Aguilar HC, Fulcher JA, Levroney EL, Harrison R, Wright L, Robinson LR, Aspericueta V, Panico M, Haslam SM, Morris HR, Dell A, Lee B, Baum LG. Endothelial galectin-1 binds to specific glycans on nipah virus fusion protein and inhibits maturation, mobility, and function to block syncytia formation. Plos Pathogens. 6: e1000993. PMID 20657665 DOI: 10.1371/Journal.Ppat.1000993  0.308
2010 Crawford BE, Garner OB, Bishop JR, Zhang DY, Bush KT, Nigam SK, Esko JD. Loss of the heparan sulfate sulfotransferase, Ndst1, in mammary epithelial cells selectively blocks lobuloalveolar development in mice. Plos One. 5: e10691. PMID 20502530 DOI: 10.1371/Journal.Pone.0010691  0.647
2008 Garner OB, Baum LG. Galectin-glycan lattices regulate cell-surface glycoprotein organization and signalling. Biochemical Society Transactions. 36: 1472-7. PMID 19021578 DOI: 10.1042/Bst0361472  0.333
2008 Garner OB, Yamaguchi Y, Esko JD, Videm V. Small changes in lymphocyte development and activation in mice through tissue-specific alteration of heparan sulphate. Immunology. 125: 420-9. PMID 18479348 DOI: 10.1111/J.1365-2567.2008.02856.X  0.527
2007 Elson-Schwab L, Garner OB, Schuksz M, Crawford BE, Esko JD, Tor Y. Guanidinylated neomycin delivers large, bioactive cargo into cells through a heparan sulfate-dependent pathway. The Journal of Biological Chemistry. 282: 13585-91. PMID 17311923 DOI: 10.1074/Jbc.M700463200  0.595
Low-probability matches (unlikely to be authored by this person)
2019 Culbreath K, Melanson S, Gale J, Baker J, Li F, Saebo O, Kommedal O, Contreras D, Garner OB, Yang S. Validation and Retrospective Clinical Evaluation of a Quantitative 16S rRNA Gene Metagenomic Sequencing Assay for Bacterial Pathogen Detection in Body Fluids. The Journal of Molecular Diagnostics : Jmd. PMID 31229651 DOI: 10.1016/J.Jmoldx.2019.05.002  0.3
2017 Woo J, Arboleda V, Garner OB. Point-of-Care Testing for Group A Streptococcus Infection and Influenza Clinical Microbiology Newsletter. 39: 151-157. DOI: 10.1016/J.Clinmicnews.2017.09.004  0.298
2013 Westblade LF, Jennemann R, Branda JA, Bythrow M, Ferraro MJ, Garner OB, Ginocchio CC, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Rychert JA, Sercia L, Burnham CA. Multicenter study evaluating the Vitek MS system for identification of medically important yeasts. Journal of Clinical Microbiology. 51: 2267-72. PMID 23658267 DOI: 10.1128/Jcm.00680-13  0.296
2015 Berg B, Cortazar B, Tseng D, Ozkan H, Feng S, Wei Q, Chan RY, Burbano J, Farooqui Q, Lewinski M, Di Carlo D, Garner OB, Ozcan A. Cellphone-Based Hand-Held Microplate Reader for Point-of-Care Testing of Enzyme-Linked Immunosorbent Assays. Acs Nano. 9: 7857-66. PMID 26159546 DOI: 10.1021/Acsnano.5B03203  0.296
2014 Baum LG, Garner OB, Schaefer K, Lee B. Microbe-Host Interactions are Positively and Negatively Regulated by Galectin-Glycan Interactions. Frontiers in Immunology. 5: 284. PMID 24995007 DOI: 10.3389/Fimmu.2014.00284  0.292
2017 Kong JE, Wei Q, Tseng D, Zhang J, Pan E, Lewinski M, Garner OB, Ozcan A, Di Carlo D. Highly Stable and Sensitive Nucleic Acid Amplification and Cell-Phone Based Readout. Acs Nano. PMID 28234452 DOI: 10.1021/Acsnano.6B08274  0.291
2014 Manji R, Bythrow M, Branda JA, Burnham CA, Ferraro MJ, Garner OB, Jennemann R, Lewinski MA, Mochon AB, Procop GW, Richter SS, Rychert JA, Sercia L, Westblade LF, Ginocchio CC. Multi-center evaluation of the VITEK® MS system for mass spectrometric identification of non-Enterobacteriaceae Gram-negative bacilli. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. 33: 337-46. PMID 24019163 DOI: 10.1007/S10096-013-1961-2  0.29
2016 Kim D, Garner OB, Ozcan A, Di Carlo D. Homogenous Entropy-Driven Amplified Detection of Biomolecular Interactions. Acs Nano. PMID 27462995 DOI: 10.1021/Acsnano.6B02060  0.288
2013 Richter SS, Sercia L, Branda JA, Burnham CA, Bythrow M, Ferraro MJ, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Rychert JA, Westblade LF, Procop GW. Identification of Enterobacteriaceae by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry using the VITEK MS system. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. 32: 1571-8. PMID 23818163 DOI: 10.1007/S10096-013-1912-Y  0.288
2015 Deak E, Charlton CL, Bobenchik AM, Miller SA, Pollett S, McHardy IH, Wu MT, Garner OB. Comparison of the Vitek MS and Bruker Microflex LT MALDI-TOF MS platforms for routine identification of commonly isolated bacteria and yeast in the clinical microbiology laboratory. Diagnostic Microbiology and Infectious Disease. 81: 27-33. PMID 25446889 DOI: 10.1016/J.Diagmicrobio.2014.09.018  0.288
2020 Banerjee R, Komarow L, Virk A, Rajapakse N, Schuetz AN, Dylla B, Earley M, Lok J, Kohner P, Ihde S, Cole N, Hines L, Reed K, Garner OB, Chandrasekaran S, et al. Randomized trial evaluating clinical impact of RAPid IDentification and Susceptibility testing for Gram Negative bacteremia (RAPIDS-GN). Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 32374822 DOI: 10.1093/Cid/Ciaa528  0.286
2020 Hogan CA, Yang S, Garner OB, Green DA, Gomez CA, Dien Bard J, Pinsky BA, Banaei N. Clinical Impact of Metagenomic Next-Generation Sequencing of Plasma Cell-Free DNA for the Diagnosis of Infectious Diseases: A Multicenter Retrospective Cohort Study. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 31942944 DOI: 10.1093/Cid/Ciaa035  0.278
2015 Westblade LF, Garner OB, MacDonald K, Bradford C, Pincus DH, Mochon AB, Jennemann R, Manji R, Bythrow M, Lewinski MA, Burnham CA, Ginocchio CC. Assessment of Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Bacterial and Yeast Identification. Journal of Clinical Microbiology. 53: 2349-52. PMID 25926486 DOI: 10.1128/Jcm.00187-15  0.277
2019 Joung HA, Ballard ZS, Ma A, Tseng DK, Teshome H, Burakowski S, Garner OB, Di Carlo D, Ozcan A. Paper-based multiplexed vertical flow assay for point-of-care testing. Lab On a Chip. PMID 30729974 DOI: 10.1039/C9Lc00011A  0.274
2020 Larkin PMK, Realegeno S, Ward KW, Garner OB, Yang S. An Unusual Carbapenem Resistant Carrying Plasmid-mediated AmpC and Mutated in A Patient with Recurrent Urinary Tract Infections. Idcases. 20: e00781. PMID 32420029 DOI: 10.1016/J.Idcr.2020.E00781  0.274
2020 Brown C, Tseng D, Larkin PMK, Realegeno S, Mortimer L, Subramonian A, Carlo DD, Garner OB, Ozcan A. Automated, Cost-Effective Optical System for Accelerated Antimicrobial Susceptibility Testing (AST) Using Deep Learning Acs Photonics. DOI: 10.1021/Acsphotonics.0C00841  0.273
2017 Feng SW, Tseng D, Carlo DD, Garner OB, Ozcan A. A cost-effective smartphone-based antimicrobial susceptibility test reader for drug resistance testing (Conference Presentation) Proceedings of Spie. 10055. DOI: 10.1117/12.2253602  0.271
2014 Branda JA, Rychert J, Burnham CA, Bythrow M, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Sercia LF, Westblade LF, Ferraro MJ. Multicenter validation of the VITEK MS v2.0 MALDI-TOF mass spectrometry system for the identification of fastidious gram-negative bacteria. Diagnostic Microbiology and Infectious Disease. 78: 129-31. PMID 24321357 DOI: 10.1016/J.Diagmicrobio.2013.08.013  0.271
2020 Munoz HE, Riche CT, Kong JE, van Zee M, Garner OB, Ozcan A, Di Carlo D. Fractal-LAMP: Label-free analysis of fractal precipitate for digital loop-mediated isothermal nucleic acid amplification. Acs Sensors. PMID 31902202 DOI: 10.1021/Acssensors.9B01974  0.269
2019 Jean S, Garrett S, Anglade C, Bridon L, Davies L, Garner OB, Richards J, Wallace M, Wootton M, Burnham CA. Multicenter clinical evaluation of ETEST® Meropenem/Vaborbactam (bioMérieux) for susceptibility testing of () and . Journal of Clinical Microbiology. PMID 31619532 DOI: 10.1128/Jcm.01205-19  0.264
2017 Kim D, Wei Q, Kim DH, Tseng D, Zhang J, Pan E, Garner OB, Ozcan A, Di Carlo D. Enzyme-free Nucleic Acid Amplification Assay Using a Cellphone-Based Well Plate Fluorescence Reader. Analytical Chemistry. PMID 29136461 DOI: 10.1021/Acs.Analchem.7B03848  0.262
2017 Ramos E, Garner OB. Clinical Comparison of the NOWDiagnostics' ADEXUSDx Human Chorionic Gonadotropin Point-of-Care Test with the Roche Elecsys hCG + β2 for the Serum Measurement of Human Chorionic Gonadotropin. The Journal of Applied Laboratory Medicine. 2: 234-237. PMID 32630983 DOI: 10.1373/Jalm.2017.023077  0.255
2016 Yang S, McHardy IH, Hemarajata P, Wu MT, Garner OB. Microbial recovery from clot-activating Vacutainers®. Diagnostic Microbiology and Infectious Disease. PMID 27306117 DOI: 10.1016/J.Diagmicrobio.2016.05.015  0.254
2018 Kahkeshani S, Kong JE, Wei Q, Tseng D, Garner OB, Ozcan A, Di Carlo D. Ferrodrop dose-optimized-digital quantification of biomolecules in low-volume samples. Analytical Chemistry. PMID 30004217 DOI: 10.1021/Acs.Analchem.8B00958  0.253
2011 Mochon AB, Garner OB, Hindler JA, Krogstad P, Ward KW, Lewinski MA, Rasheed JK, Anderson KF, Limbago BM, Humphries RM. New Delhi metallo-β-lactamase (NDM-1)-producing Klebsiella pneumoniae: case report and laboratory detection strategies. Journal of Clinical Microbiology. 49: 1667-70. PMID 21325558 DOI: 10.1128/Jcm.00183-11  0.252
2019 Blair CS, Garner OB, Pedone B, Elias S, Comulada WS, Landovitz RJ. Factors associated with repeat rectal Neisseria gonorrhoeae and Chlamydia trachomatis screening following inconclusive nucleic acid amplification testing: A potential missed opportunity for screening. Plos One. 14: e0226413. PMID 31830129 DOI: 10.1371/Journal.Pone.0226413  0.247
2020 van Duin D, Arias CA, Komarow L, Chen L, Hanson BM, Weston G, Cober E, Garner OB, Jacob JT, Satlin MJ, Fries BC, Garcia-Diaz J, Doi Y, Dhar S, Kaye KS, et al. Molecular and clinical epidemiology of carbapenem-resistant Enterobacterales in the USA (CRACKLE-2): a prospective cohort study. The Lancet. Infectious Diseases. PMID 32151332 DOI: 10.1016/S1473-3099(19)30755-8  0.244
2017 Arboleda VA, Garner OB. Ensuring the Quality of Point-of-Care Testing in a Large and Decentralized Ambulatory Care Setting. American Journal of Clinical Pathology. 148: 336-344. PMID 28967953 DOI: 10.1093/Ajcp/Aqx081  0.243
2019 Blair C, Garner O, Pedone B, Elias S, Landovitz R. P013 Screening practices related to inconclusive neisseria gonorrhoeae and chlamydia trachomatis nucleic acid amplification testing Sexually Transmitted Infections. 95. DOI: 10.1136/Sextrans-2019-Sti.222  0.242
2020 Singer JS, Cheng EM, Murad DA, de St Maurice A, Hines OJ, Uslan DZ, Garner O, Pregler J, Bukata SV, Pfeffer MA, Cherry RA. Low prevalence (0.13%) of COVID-19 infection in asymptomatic pre-operative/pre-procedure patients at a large, academic medical center informs approaches to perioperative care. Surgery. PMID 33008615 DOI: 10.1016/J.Surg.2020.07.048  0.24
2020 Adamson PC, Goodman-Meza D, Vijayan T, Yang S, Garner OB. Diagnostic yield of repeat testing for SARS-CoV-2: Experience from a large health system in Los Angeles. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. PMID 32835787 DOI: 10.1016/J.Ijid.2020.08.048  0.238
2020 Escovedo C, Bell D, Cheng E, Garner O, Ziman A, Vangala S, Gounder P, Lerner C. Noninterruptive Clinical Decision Support Decreases Ordering of Respiratory Viral Panels during Influenza Season. Applied Clinical Informatics. 11: 315-322. PMID 32349143 DOI: 10.1055/S-0040-1709507  0.228
2017 Arboleda V, Garner O. Reigning in the Point-of-Care Beast: Assessing Quality of Point-of-Care Testing Within the Ambulatory Network of a Large Health System American Journal of Clinical Pathology. 147: S157-S158. DOI: 10.1093/Ajcp/Aqw191.013  0.226
2014 Ramirez-Avila L, Garner OB, Cherry JD. Relative EBV antibody concentrations and cost of standard IVIG and CMV-IVIG for PTLD prophylaxis in solid organ transplant patients. Pediatric Transplantation. 18: 599-601. PMID 25041939 DOI: 10.1111/Petr.12315  0.225
2018 Krug C, Terashita D, Knight WM, Bhaurla S, Felix-Mendez J, Miner A, Bloomfield L, Ha D, Butler-Wu S, Fernandes P, Garner O, McKinnell J. 607. Group B Streptococcus Resistance to Clindamycin: Regional Antibiogram Surveillance in Los Angeles County Open Forum Infectious Diseases. 5: S222-S222. DOI: 10.1093/Ofid/Ofy210.614  0.224
2018 Albeiroti S, Cutidioc-Padilla L, Kelly K, Garner O. 72 Long-Term Performance of the DCA Vantage Analyzer for HbA1C Measurement and Initiating HbA1C Proficiency Testing in the Ambulatory Setting American Journal of Clinical Pathology. 149: S201-S201. DOI: 10.1093/Ajcp/Aqx149.441  0.223
2013 Westblade LF, Jennemann R, Branda JA, Bythrow M, Ferraro MJ, Garner OB, Ginocchio CC, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Rychert JA, Sercia L, Burnham CA. Reply to "risks of 'blind' automated identification systems in medical microbiology". Journal of Clinical Microbiology. 51: 3912. PMID 24133054 DOI: 10.1128/Jcm.02349-13  0.213
2018 Yu C, Skootsky S, Grossman M, Garner OB, Betlachin A, Esrailian E, Hommes DW, May FP. A Multi-Level Fit-Based Quality Improvement Initiative to Improve Colorectal Cancer Screening in a Managed Care Population. Clinical and Translational Gastroenterology. 9: 177. PMID 30177700 DOI: 10.1038/S41424-018-0046-Z  0.211
2011 Wen JC, McCannel CA, Mochon AB, Garner OB. Bacterial dispersal associated with speech in the setting of intravitreous injections. Archives of Ophthalmology (Chicago, Ill. : 1960). 129: 1551-4. PMID 21825179 DOI: 10.1001/Archophthalmol.2011.227  0.208
2022 Zheng Z, Cao Y, Chandrasekaran S, Schmidt JJ, Garner OB, Monbouquette HG. An amplification-free, 16S rRNA test for in urine. Sensors & Diagnostics. 2: 163-167. PMID 36741249 DOI: 10.1039/d2sd00128d  0.192
2023 Ghosh R, Joung HA, Goncharov A, Palanisamy B, Ngo K, Pejcinovic K, Krockenberger N, Horn EJ, Garner OB, Ghazal E, O'Kula A, Arnaboldi PM, Dattwyler RJ, Ozcan A, Di Carlo D. Single-tier point-of-care serodiagnosis of Lyme disease. Biorxiv : the Preprint Server For Biology. PMID 37398357 DOI: 10.1101/2023.06.14.544508  0.176
2023 von Bredow B, Caldera JR, Cerón S, Chan JL, Gray HK, Garner OB, Yang S. Clinical next-generation sequencing assay combining full-length gene amplification and shotgun sequencing for the detection of CMV drug resistance mutations. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 165: 105520. PMID 37336174 DOI: 10.1016/j.jcv.2023.105520  0.175
2020 Price TK, Bowland BC, Chandrasekaran S, Garner OB, Yang S. Performance Characteristics of SARS-CoV-2 PCR Tests in A Single Health System: Analysis of over 10,000 Results from Three Different Assays. The Journal of Molecular Diagnostics : Jmd. PMID 33285286 DOI: 10.1016/j.jmoldx.2020.11.008  0.17
2021 Winnett A, Srinivasan V, Davis M, Vijayan T, Uslan DZ, Garner OB, de St Maurice A. The Path of More Resistance: A Comparison of NHSN and CLSI Criteria in Developing Cumulative Antimicrobial Susceptibility Test Reports and Institutional Antibiograms. Journal of Clinical Microbiology. JCM0136621. PMID 34851679 DOI: 10.1128/JCM.01366-21  0.165
2023 Shaw B, von Bredow B, Tsan A, Garner O, Yang S. Clinical Whole-Genome Sequencing Assay for Rapid Complex First-Line Drug Susceptibility Testing and Phylogenetic Relatedness Analysis. Microorganisms. 11. PMID 37894195 DOI: 10.3390/microorganisms11102538  0.163
2020 Bloom JS, Jones EM, Gasperini M, Lubock NB, Sathe L, Munugala C, Booeshaghi AS, Brandenberg OF, Guo L, Boocock J, Simpkins SW, Lin I, LaPierre N, Hong D, Zhang Y, ... ... Garner OB, et al. Swab-Seq: A high-throughput platform for massively scaled up SARS-CoV-2 testing. Medrxiv : the Preprint Server For Health Sciences. PMID 32909008 DOI: 10.1101/2020.08.04.20167874  0.163
2022 Lin H, Yu W, A Sabet K, Bogumil M, Zhao Y, Hambalek J, Lin S, Chandrasekaran S, Garner O, Di Carlo D, Emaminejad S. Ferrobotic swarms enable accessible and adaptable automated viral testing. Nature. 611: 570-577. PMID 36352231 DOI: 10.1038/s41586-022-05408-3  0.16
2021 Price TK, Realegeno S, Mirasol R, Tsan A, Chandrasekaran S, Garner OB, Yang S. Validation, Implementation, and Clinical Utility of Whole Genome Sequence-Based Bacterial Identification in the Clinical Microbiology Laboratory. The Journal of Molecular Diagnostics : Jmd. PMID 34384892 DOI: 10.1016/j.jmoldx.2021.07.020  0.16
2021 Realegeno S, Ward K, Garner OB, Yang S. Deceiving Phenotypic Susceptibility Results on a Blood Isolate Carrying Plasmid-Mediated AmpC Gene . Frontiers in Cellular and Infection Microbiology. 11: 561880. PMID 33791229 DOI: 10.3389/fcimb.2021.561880  0.16
2020 Hilt EE, Fitzwater SP, Ward K, de St Maurice A, Chandrasekaran S, Garner OB, Yang S. Carbapenem Resistant Carrying Isolated From Two Solid Organ Transplant Patients. Frontiers in Cellular and Infection Microbiology. 10: 563482. PMID 33194801 DOI: 10.3389/fcimb.2020.563482  0.156
2023 Salem-Bango Z, Price TK, Chan JL, Chandrasekaran S, Garner OB, Yang S. Fungal Whole-Genome Sequencing for Species Identification: From Test Development to Clinical Utilization. Journal of Fungi (Basel, Switzerland). 9. PMID 36836298 DOI: 10.3390/jof9020183  0.154
2021 Larkin PMK, Mortimer L, Malenfant JH, Gaynor P, Contreras DA, Garner OB, Yang S, Allyn P. Investigation of Phylogeny and Drug Resistance Mechanisms of Isolated from Blood and Lower Respiratory Tract. Microbial Drug Resistance (Larchmont, N.Y.). PMID 33656389 DOI: 10.1089/mdr.2020.0263  0.147
2023 Caldera JR, Gray HK, Garner OB, Yang S. FDA trial regulation of laboratory developed tests (LDTs): An academic medical center's experience with Mpox in-house testing. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 169: 105611. PMID 37866092 DOI: 10.1016/j.jcv.2023.105611  0.144
2021 Realegeno S, Adeyiga O, Winston DJ, Beaird OE, Garner OB, Yang S. Utilization of whole genome sequencing for resolution of discrepant drug susceptibility results: A case report. Idcases. 26: e01308. PMID 34745885 DOI: 10.1016/j.idcr.2021.e01308  0.141
2023 Darboe S, Mirasol R, Adejuyigbe B, Muhammad AK, Nadjm B, De St Maurice A, Dogan TL, Ceesay B, Umukoro S, Okomo U, Nwakanma D, Roca A, Secka O, Forrest K, Garner OB. Using an Antibiogram Profile to Improve Infection Control and Rational Antimicrobial Therapy in an Urban Hospital in The Gambia, Strategies and Lessons for Low- and Middle-Income Countries. Antibiotics (Basel, Switzerland). 12. PMID 37107152 DOI: 10.3390/antibiotics12040790  0.14
2019 Traczewski MM, Beasley D, Harrington A, DesJarlais S, Garner O, Hastey C, Brookman R, Lockett Z, Chau J, Zimmer B. 2132. Multicenter Evaluation of Eravacycline MIC Results for Enterobacteriaceae Using MicroScan Dried Gram-Negative MIC Panels Open Forum Infectious Diseases. 6: S722-S722. DOI: 10.1093/ofid/ofz360.1812  0.14
2022 Jackson N, Belmont CR, Tarlton NJ, Allegretti YH, Adams-Sapper S, Huang YY, Borges CA, Frazee BW, Florence-Petrovic D, Hufana C, Parker A, Mastrangelo CF, Awasthi S, Kane I, Coralic Z, ... ... Garner O, et al. Genetic Predictive Factors for Nonsusceptible Phenotypes and Multidrug Resistance in Expanded-Spectrum Cephalosporin-Resistant Uropathogenic Escherichia coli from a Multicenter Cohort: Insights into the Phenotypic and Genetic Basis of Coresistance. Msphere. e0047122. PMID 36377882 DOI: 10.1128/msphere.00471-22  0.137
2019 Garner O, Traczewski MM, Beasley D, Harrington A, DesJarlais S, Hastey C, Brookman R, Lockett Z, Chau J, Zimmer B. 2131. Multicenter Evaluation of Meropenem/Vaborbactam MIC Results for Enterobacteriaceae Using MicroScan Dried Gram-Negative MIC Panels Open Forum Infectious Diseases. 6: S722-S722. DOI: 10.1093/ofid/ofz360.1811  0.136
2020 Ballard ZS, Joung HA, Goncharov A, Liang J, Nugroho K, Di Carlo D, Garner OB, Ozcan A. Deep learning-enabled point-of-care sensing using multiplexed paper-based sensors. Npj Digital Medicine. 3: 66. PMID 32411827 DOI: 10.1038/s41746-020-0274-y  0.136
2021 Murad D, Chandrasekaran S, Pallai A, Garner OB, Denny CT. SARS-Cov2 Infection Detection by Polymerase Chain Reaction and Serologic Testing in Clinical Practice. Journal of Clinical Microbiology. PMID 33903168 DOI: 10.1128/JCM.00431-21  0.135
2021 Luo Y, Joung HA, Esparza S, Rao J, Garner O, Ozcan A. Quantitative particle agglutination assay for point-of-care testing using mobile holographic imaging and deep learning. Lab On a Chip. PMID 34292287 DOI: 10.1039/d1lc00467k  0.135
2021 Price TK, Davar K, Contreras D, Ward KW, Garner OB, Simner PJ, Yang S, Chandrasekaran S. Case Report and Genomic Analysis of Cefiderocol-Resistant Escherichia coli Clinical Isolates. American Journal of Clinical Pathology. PMID 34542575 DOI: 10.1093/ajcp/aqab115  0.132
2021 Bloom JS, Sathe L, Munugala C, Jones EM, Gasperini M, Lubock NB, Yarza F, Thompson EM, Kovary KM, Park J, Marquette D, Kay S, Lucas M, Love T, Sina Booeshaghi A, ... ... Garner OB, et al. Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples. Nature Biomedical Engineering. PMID 34211145 DOI: 10.1038/s41551-021-00754-5  0.131
2021 Chiang SH, Tu M, Cheng J, Wei F, Li F, Chia D, Garner O, Chandrasekaran S, Bender R, Strom CM, Wong DTW. Development and validation of a quantitative, non-invasive, highly sensitive and specific, electrochemical assay for anti-SARS-CoV-2 IgG antibodies in saliva. Plos One. 16: e0251342. PMID 34197468 DOI: 10.1371/journal.pone.0251342  0.129
2023 Chawla R, Shaw B, von Bredow B, Chong C, Garner OB, Zangwill KM, Yang S. Accurate subspecies-level identification of clinically significant Mycobacterium avium and Mycobacterium intracellulare by whole-genome sequencing. Journal of Microbiological Methods. 106726. PMID 37120137 DOI: 10.1016/j.mimet.2023.106726  0.129
2021 Realegeno S, Mirasol R, Garner OB, Yang S. Clinical Whole Genome Sequencing for Clarithromycin and Amikacin Resistance Prediction and Subspecies Identification of Mycobacterium abscessus. The Journal of Molecular Diagnostics : Jmd. PMID 34454109 DOI: 10.1016/j.jmoldx.2021.07.023  0.126
2020 Chiang SH, Tu M, Cheng J, Wei F, Li F, Chia D, Garner O, Chandrasekaran S, Bender R, Strom CM, Wong DTW. Development and validation of a highly sensitive and specific electrochemical assay to quantify anti-SARS-CoV-2 IgG antibodies to facilitate pandemic surveillance and monitoring of vaccine response. Medrxiv : the Preprint Server For Health Sciences. PMID 33236034 DOI: 10.1101/2020.11.12.20230656  0.124
2023 Shah V, Yang X, Arnheim A, Udani S, Tseng D, Luo Y, Ouyang M, Destgeer G, Garner OB, Koydemir HC, Ozcan A, Di Carlo D. Amphiphilic Particle-Stabilized Nanoliter Droplet Reactors with a Multimodal Portable Reader for Distributive Biomarker Quantification. Acs Nano. 17: 19952-19960. PMID 37824510 DOI: 10.1021/acsnano.3c04994  0.12
2021 Kamau E, Maliksi E, Kwan N, Garner OB, Yang S. Catabacter hongkongensis bacteremia identified by direct metagenomic sequencing of positive blood culture fluid, first case report in the US. Anaerobe. 102421. PMID 34314867 DOI: 10.1016/j.anaerobe.2021.102421  0.115
2022 Adamson PC, Currier JS, Uslan DZ, Garner OB. Prevalence and Factors Associated With Antigen Test Positivity Following SARS-CoV-2 Infection Among Health Care Workers in Los Angeles. Open Forum Infectious Diseases. 9: ofac462. PMID 36285175 DOI: 10.1093/ofid/ofac462  0.111
2022 Kamau E, Ranson EL, Tsan AT, Bergmann-Leitner ES, Garner OB, Yang S. Clinical and genomic characterization of hypervirulent (hvKp) infections passive surveillance in Southern California, 2020-2022. Frontiers in Microbiology. 13: 1001169. PMID 36312975 DOI: 10.3389/fmicb.2022.1001169  0.11
2021 Hilt EE, Boocock J, Trejo M, Le CQ, Guo L, Zhang Y, Sathe L, Arboleda VA, Yin Y, Bloom JS, Wang PC, Elmore JG, Kruglyak L, Shrestha L, Bakhash SAM, ... ... Garner OB, et al. Retrospective Detection of SARS-CoV-2 in Symptomatic Patients prior to Widespread Diagnostic Testing in Southern California. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 33939799 DOI: 10.1093/cid/ciab360  0.107
2019 Contreras DA, Fitzwater SP, Nanayakkara DD, Schaenman J, Aldrovandi GM, Garner OB, Yang S. Co-Infections of Two Strains of NDM-1 and OXA-232 Co-producing in a Kidney Transplant Patient. Antimicrobial Agents and Chemotherapy. PMID 31527031 DOI: 10.1128/Aac.00948-19  0.103
2021 Gupta K, Unhale R, Garner OB, Deng SX, Fung SS. Infectious Keratitis Isolates and Susceptibility in Southern California. Cornea. PMID 35315617 DOI: 10.1097/ICO.0000000000002884  0.1
2023 Goncharov A, Joung HA, Ghosh R, Han GR, Ballard ZS, Maloney Q, Bell A, Aung CTZ, Garner OB, Carlo DD, Ozcan A. Deep Learning-Enabled Multiplexed Point-of-Care Sensor using a Paper-Based Fluorescence Vertical Flow Assay. Small (Weinheim An Der Bergstrasse, Germany). e2300617. PMID 37104829 DOI: 10.1002/smll.202300617  0.1
2023 Rodriguez-Watson CV, Sheils NE, Louder AM, Eldridge EH, Lin ND, Pollock BD, Gatz JL, Grannis SJ, Vashisht R, Ghauri K, Valo G, Chakravarty AG, Lasky T, Jung M, Lovell SL, ... ... Garner OB, et al. Real-world utilization of SARS-CoV-2 serological testing in RNA positive patients across the United States. Plos One. 18: e0281365. PMID 36763574 DOI: 10.1371/journal.pone.0281365  0.096
2011 Mochon AB, Garner OB, Hindler JA, Krogstad P, Ward KW, Lewinski MA, Rasheed JK, Anderson KF, Limbago BM, Humphries RM. New Delhi metallo-β-lactamase (NDM-1)-producing Klebsiella pneumoniae: Case report and laboratory detection strategies (Journal of Clinical Microbiology (2011) 49, 4, (1667-1670)) Journal of Clinical Microbiology. 49: 2386. DOI: 10.1128/JCM.00730-11  0.094
2021 Jean S, Burnham CD, Chapin K, Garner OB, Pant Pai N, Turabelidze G, Butler-Wu S. At-Home Testing for Infectious Diseases: The Laboratory Where You Live. Clinical Chemistry. 68: 19-26. PMID 34969103 DOI: 10.1093/clinchem/hvab198  0.094
2014 Wu MT, Garner OB. Detection of human viral pathogens: conventional versus molecular approaches. Mlo: Medical Laboratory Observer. 46: 8, 10-2; quiz 14. PMID 25158395  0.092
2023 Rodriguez-Watson CV, Louder AM, Kabelac C, Frederick CM, Sheils NE, Eldridge EH, Lin ND, Pollock BD, Gatz JL, Grannis SJ, Vashisht R, Ghauri K, Knepper C, Leonard S, Embi PJ, ... ... Garner OB, et al. Real-world performance of SARS-Cov-2 serology tests in the United States, 2020. Plos One. 18: e0279956. PMID 36735683 DOI: 10.1371/journal.pone.0279956  0.092
2020 Ranson E, Ship H, Garner O, Yang S, Bhattacharya D. Unusual presentation of meningococcal meningitis in the elderly and utility of CSF PCR testing. Access Microbiology. 2: acmi000158. PMID 33195972 DOI: 10.1099/acmi.0.000158  0.088
2021 Price TK, Mirasol R, Ward KW, Dayo AJ, Hilt EE, Chandrasekaran S, Garner OB, de St Maurice A, Yang S. Genomic Characterizations of Clade III Lineage of Candida auris, California, USA. Emerging Infectious Diseases. 27: 1223-1227. PMID 33755003 DOI: 10.3201/eid2704.204361  0.088
2021 Kamau E, Allyn PR, Beaird OE, Ward KW, Kwan N, Garner OB, Yang S. Endogenous Endophthalmitis Caused by ST66-K2 Hypervirulent Klebsiella pneumoniae, United States. Emerging Infectious Diseases. 27: 2215-2218. PMID 34287130 DOI: 10.3201/eid2708.210234  0.086
2021 Bobe JR, Jutras BL, Horn EJ, Embers ME, Bailey A, Moritz RL, Zhang Y, Soloski MJ, Ostfeld RS, Marconi RT, Aucott J, Ma'ayan A, Keesing F, Lewis K, Ben Mamoun C, ... ... Garner O, et al. Recent Progress in Lyme Disease and Remaining Challenges. Frontiers in Medicine. 8: 666554. PMID 34485323 DOI: 10.3389/fmed.2021.666554  0.084
2021 Newhouse CN, Saleh T, Fuller T, Kerin T, Cambou MC, Swayze EJ, Le C, Seo W, Trejo M, Garner OB, Chandrasekaran S, Nielsen-Saines K. Predictors of SARS-CoV-2 Infection in Youth at a Large, Urban Healthcare Center in California, March-September 2020. Frontiers in Pediatrics. 9: 752247. PMID 34869107 DOI: 10.3389/fped.2021.752247  0.082
2017 Arboleda V, Garner O. Reigning in the Point-of-Care Beast: Assessing Quality of Point-of-Care Testing Within the Ambulatory Network of a Large Health System. American Journal of Clinical Pathology. PMID 28339868 DOI: 10.1093/ajcp/aqw191.020  0.082
2021 Foo SS, Cambou MC, Mok T, Fajardo VM, Jung KL, Fuller T, Chen W, Kerin T, Mei J, Bhattacharya D, Choi Y, Wu X, Xia T, Shin WJ, Cranston J, ... ... Garner O, et al. The systemic inflammatory landscape of COVID19 in pregnancy: Extensive serum proteomic profiling of mother-infant dyads with in-utero SARS-CoV-2. Cell Reports. Medicine. 100453. PMID 34723226 DOI: 10.1016/j.xcrm.2021.100453  0.08
2021 Dwivedi HP, Franklin S, Chandrasekaran S, Garner O, Traczewski MM, Beasley D, Procop GW, Tuohy M, Wilson D, Bala Y, Pincus DH. Multicenter clinical evaluation of VITEK® 2 meropenem-vaborbactam for susceptibility testing of and . Journal of Clinical Microbiology. JCM0161021. PMID 34705536 DOI: 10.1128/JCM.01610-21  0.08
2021 Vashisht R, Patel A, Crews BO, Garner OB, Dahm L, Wilson C, Butte AJ. Age- and Sex-Associated Variations in the Sensitivity of Serological Tests Among Individuals Infected With SARS-CoV-2. Jama Network Open. 4: e210337. PMID 33576815 DOI: 10.1001/jamanetworkopen.2021.0337  0.079
2022 de St Maurice A, Parti U, Anikst VE, Harper T, Mirasol R, Dayo AJ, Garner OB, Prabaker KK, Yang S. Clinical, microbiological, and genomic characteristics of clade-III colonization and infection in southern California, 2019-2022. Infection Control and Hospital Epidemiology. 1-9. PMID 36052507 DOI: 10.1017/ice.2022.204  0.078
2022 Guo L, Boocock J, Hilt EE, Chandrasekaran S, Zhang Y, Munugala C, Sathe L, Alexander N, Arboleda VA, Flint J, Eskin E, Luo C, Yang S, Garner OB, Yin Y, et al. Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA. Bmc Genomics. 23: 260. PMID 35379194 DOI: 10.1186/s12864-022-08488-7  0.077
2021 Yang S, Hemarajata P, Hilt EE, Price TK, Garner OB, Green NM. Investigation of SARS-CoV-2 Epsilon Variant and Hospitalization Status by Genomic Surveillance in a Single Large Health System During the 2020-2021 Winter Surge in Southern California. American Journal of Clinical Pathology. PMID 34875004 DOI: 10.1093/ajcp/aqab203  0.076
2020 Larkin PMK, Manuel V, Hernandez N, Garner OB. Novel Use of Rapid Antigen Influenza Testing in the Outpatient Setting as an Early Warning Sign of Influenza Activity in the Emergency Departments of an Integrated Health System. Journal of Clinical Microbiology. PMID 32967898 DOI: 10.1128/JCM.01560-20  0.073
2020 Yang S, Stanzione N, Uslan DZ, Garner OB, de St Maurice A. Clinical and Epidemiologic Evaluation of Inconclusive COVID-19 PCR Results Using a Quantitative Algorithm. American Journal of Clinical Pathology. PMID 33274731 DOI: 10.1093/ajcp/aqaa251  0.072
2023 Zheng Z, Cao Y, Chandrasekaran S, Schmidt JJ, Garner OB, Monbouquette HG. Correction: An amplification-free, 16S rRNA test for in urine. Sensors & Diagnostics. 2: 468. PMID 36942047 DOI: 10.1039/d3sd90005c  0.071
2020 Oland G, Garner O, de St Maurice A. Prospective clinical validation of 3D printed nasopharyngeal swabs for diagnosis of COVID-19. Diagnostic Microbiology and Infectious Disease. 99: 115257. PMID 33220640 DOI: 10.1016/j.diagmicrobio.2020.115257  0.068
2021 Cervinski MA, Parnas ML, Buxton BP, Choi J, Garner O, Neath SX, Zreloff JL. Current Testing Strategies for SARS-CoV-2 in the United States. Clinical Chemistry. PMID 33822921 DOI: 10.1093/clinchem/hvab046  0.068
2023 Saleh T, Fuller T, Cambou MC, Segura ER, Kamau E, Yang S, Garner OB, Nielsen-Saines K. Epidemiology and SARS-CoV-2 Infection Patterns among Youth Followed at a Large Los Angeles Health Network during 2020-2022: Clinical Presentation, Prevalent Strains, and Correlates of Disease Severity. Vaccines. 11. PMID 37376413 DOI: 10.3390/vaccines11061024  0.062
2022 Saleh T, Kerin T, Fuller T, Paiola S, Cambou MC, Motwani Y, Newhouse CN, Yang S, Kamau E, Garner OB, Chandrasekaran S, Nielsen-Saines K. Clinical and epidemiological characteristics of SARS-CoV-2 Infection in Los Angeles County youth during the first year of the pandemic. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. 122: 514-520. PMID 35803467 DOI: 10.1016/j.ijid.2022.06.040  0.056
2024 Magaki S, Zhang T, Han K, Hilda M, Yong WH, Achim C, Fishbein G, Fishbein MC, Garner O, Salamon N, Williams CK, Valdes-Sueiras MA, Hsu JJ, Kelesidis T, Mathisen GE, et al. HIV and COVID-19: two pandemics with significant (but different) central nervous system complications. Free Neuropathology. 5. PMID 38469363 DOI: 10.17879/freeneuropathology-2024-5343  0.056
2022 Prabaker KK, de St Maurice A, Uslan DZ, Yen GC, Manavi S, Gray HK, Caldera JR, Chan JL, Garner OB, Yang S. Case Report: Symptomatic Herpes Simplex Virus Type 2 and Monkeypox Coinfection in an Adult Male. The American Journal of Tropical Medicine and Hygiene. 107: 1258-1260. PMID 36375467 DOI: 10.4269/ajtmh.22-0499  0.056
2021 Adamson PC, Pfeffer MA, Arboleda VA, Garner OB, de St Maurice A, von Bredow B, Flint J, Kruglyak L, Currier JS. Lower Severe Acute Respiratory Syndrome Coronavirus 2 Viral Shedding Following Coronavirus Disease 2019 Vaccination Among Healthcare Workers in Los Angeles, California. Open Forum Infectious Diseases. 8: ofab526. PMID 35005055 DOI: 10.1093/ofid/ofab526  0.052
2022 Srinivasan V, Weinstein SE, Bhimani A, Clemons NC, Dinolfo M, Shin CS, Grier J, Lopez A, Braggs J, Boucher J, Batiste QN, Garner OB, Yang S, Vijayan T. On variants and vaccines: The effectiveness of Covid-19 monoclonal antibody therapy during two distinct periods in the pandemic. Plos One. 17: e0278394. PMID 36454767 DOI: 10.1371/journal.pone.0278394  0.051
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