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Andre Sousa - Publications

Affiliations: 
Yale University, New Haven, CT 
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Werling DM, Pochareddy S, Choi J, An JY, Sheppard B, Peng M, Li Z, Dastmalchi C, Santpere G, Sousa AMM, Tebbenkamp ATN, Kaur N, Gulden FO, Breen MS, Liang L, et al. Whole-Genome and RNA Sequencing Reveal Variation and Transcriptomic Coordination in the Developing Human Prefrontal Cortex. Cell Reports. 31: 107489. PMID 32268104 DOI: 10.1016/j.celrep.2020.03.053  0.52
2020 Shin J, Ma S, Hofer E, Patel Y, Vosberg DE, Tilley S, Roshchupkin GV, Sousa AMM, Jian X, Gottesman R, Mosley TH, Fornage M, Saba Y, Pirpamer L, Schmidt R, et al. Global and Regional Development of the Human Cerebral Cortex: Molecular Architecture and Occupational Aptitudes. Cerebral Cortex (New York, N.Y. : 1991). PMID 32198502 DOI: 10.1093/cercor/bhaa035  0.52
2019 Vrselja Z, Daniele SG, Silbereis J, Talpo F, Morozov YM, Sousa AMM, Tanaka BS, Skarica M, Pletikos M, Kaur N, Zhuang ZW, Liu Z, Alkawadri R, Sinusas AJ, Latham SR, et al. Restoration of brain circulation and cellular functions hours post-mortem. Nature. 568: 336-343. PMID 30996318 DOI: 10.1038/s41586-019-1099-1  0.56
2018 Zhu Y, Sousa AMM, Gao T, Skarica M, Li M, Santpere G, Esteller-Cucala P, Juan D, Ferrández-Peral L, Gulden FO, Yang M, Miller DJ, Marques-Bonet T, Imamura Kawasawa Y, Zhao H, et al. Spatiotemporal transcriptomic divergence across human and macaque brain development. Science (New York, N.Y.). 362. PMID 30545855 DOI: 10.1126/science.aat8077  0.68
2018 Li M, Santpere G, Imamura Kawasawa Y, Evgrafov OV, Gulden FO, Pochareddy S, Sunkin SM, Li Z, Shin Y, Zhu Y, Sousa AMM, Werling DM, Kitchen RR, Kang HJ, Pletikos M, et al. Integrative functional genomic analysis of human brain development and neuropsychiatric risks. Science (New York, N.Y.). 362. PMID 30545854 DOI: 10.1126/science.aat7615  0.68
2018 Amiri A, Coppola G, Scuderi S, Wu F, Roychowdhury T, Liu F, Pochareddy S, Shin Y, Safi A, Song L, Zhu Y, Sousa AMM, Gerstein M, Crawford GE, et al. Transcriptome and epigenome landscape of human cortical development modeled in organoids. Science (New York, N.Y.). 362. PMID 30545853 DOI: 10.1126/science.aat6720  0.68
2018 Tebbenkamp ATN, Varela L, Choi J, Paredes MI, Giani AM, Song JE, Sestan-Pesa M, Franjic D, Sousa AMM, Liu ZW, Li M, Bichsel C, Koch M, Szigeti-Buck K, Liu F, et al. The 7q11.23 Protein DNAJC30 Interacts with ATP Synthase and Links Mitochondria to Brain Development. Cell. PMID 30318146 DOI: 10.1016/j.cell.2018.09.014  0.68
2017 Carlyle BC, Kitchen RR, Kanyo JE, Voss EZ, Pletikos M, Sousa AMM, Lam TT, Gerstein MB, Sestan N, Nairn AC. A multiregional proteomic survey of the postnatal human brain. Nature Neuroscience. 20: 1787-1795. PMID 29184206 DOI: 10.1038/s41593-017-0011-2  0.56
2017 Sousa AMM, Zhu Y, Raghanti MA, Kitchen RR, Onorati M, Tebbenkamp ATN, Stutz B, Meyer KA, Li M, Kawasawa YI, Liu F, Perez RG, Mele M, Carvalho T, Skarica M, et al. Molecular and cellular reorganization of neural circuits in the human lineage. Science (New York, N.Y.). 358: 1027-1032. PMID 29170230 DOI: 10.1126/science.aan3456  0.68
2017 Sousa AMM, Meyer KA, Santpere G, Gulden FO, Sestan N. Evolution of the Human Nervous System Function, Structure, and Development. Cell. 170: 226-247. PMID 28708995 DOI: 10.1016/j.cell.2017.06.036  0.56
2016 Onorati M, Li Z, Liu F, Sousa AM, Nakagawa N, Li M, Dell'Anno MT, Gulden FO, Pochareddy S, Tebbenkamp AT, Han W, Pletikos M, Gao T, Zhu Y, Bichsel C, et al. Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neuroepithelial Stem Cells and Radial Glia. Cell Reports. PMID 27568284 DOI: 10.1016/j.celrep.2016.08.038  0.68
2016 Sousa A, Araújo P, Azevedo J, Cruz L, Fernandes I, Mateus N, de Freitas V. Antioxidant and antiproliferative properties of 3-deoxyanthocyanidins. Food Chemistry. 192: 142-8. PMID 26304331 DOI: 10.1016/j.foodchem.2015.06.108  0.68
2015 Lun MP, Johnson MB, Broadbelt KG, Watanabe M, Kang YJ, Chau KF, Springel MW, Malesz A, Sousa AM, Pletikos M, Adelita T, Calicchio ML, Zhang Y, Holtzman MJ, Lidov HG, et al. Spatially heterogeneous choroid plexus transcriptomes encode positional identity and contribute to regional CSF production. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 4903-16. PMID 25810521 DOI: 10.1523/JNEUROSCI.3081-14.2015  0.68
2014 Zhu Y, Li M, Sousa AM, Sestan N. XSAnno: a framework for building ortholog models in cross-species transcriptome comparisons. Bmc Genomics. 15: 343. PMID 24884593 DOI: 10.1186/1471-2164-15-343  0.68
2014 Sousa A, Araújo P, Cruz L, Brás NF, Mateus N, De Freitas V. Evidence for copigmentation interactions between deoxyanthocyanidin derivatives (oaklins) and common copigments in wine model solutions. Journal of Agricultural and Food Chemistry. 62: 6995-7001. PMID 24392836 DOI: 10.1021/jf404640m  0.68
2014 Pletikos M, Sousa AM, Sedmak G, Meyer KA, Zhu Y, Cheng F, Li M, Kawasawa YI, Sestan N. Temporal specification and bilaterality of human neocortical topographic gene expression. Neuron. 81: 321-32. PMID 24373884 DOI: 10.1016/j.neuron.2013.11.018  0.68
2014 Sousa A, Cabrita L, Araújo P, Mateus N, Pina F, De Freitas V. Color stability and spectroscopic properties of deoxyvitisins in aqueous solution New Journal of Chemistry. 38: 539-544. DOI: 10.1039/c3nj01271a  0.68
2013 Sousa A, Petrov V, Araújo P, Mateus N, Pina F, de Freitas V. Thermodynamics, kinetics, and photochromism of oaklins: a recent family of deoxyanthocyanidins. The Journal of Physical Chemistry. B. 117: 1901-10. PMID 23320749 DOI: 10.1021/jp3110216  0.68
2013 Sousa A, Araújo P, Mateus N, De Freitas V. Deoxyvitisins: A new set of pyrano-3-deoxyanthocyanidins Tetrahedron Letters. 54: 4785-4788. DOI: 10.1016/j.tetlet.2013.06.135  0.68
2013 Fernandes A, Sousa A, Azevedo J, Mateus N, De Freitas V. Effect of cyclodextrins on the thermodynamic and kinetic properties of cyanidin-3-O-glucoside Food Research International. 51: 748-755. DOI: 10.1016/j.foodres.2013.01.037  0.68
2012 Miller DJ, Duka T, Stimpson CD, Schapiro SJ, Baze WB, McArthur MJ, Fobbs AJ, Sousa AM, Sestan N, Wildman DE, Lipovich L, Kuzawa CW, Hof PR, Sherwood CC. Prolonged myelination in human neocortical evolution. Proceedings of the National Academy of Sciences of the United States of America. 109: 16480-5. PMID 23012402 DOI: 10.1073/pnas.1117943109  0.68
2012 Kwan KY, Lam MM, Johnson MB, Dube U, Shim S, RaÅ¡in MR, Sousa AM, Fertuzinhos S, Chen JG, Arellano JI, Chan DW, Pletikos M, Vasung L, Rowitch DH, Huang EJ, et al. Species-dependent posttranscriptional regulation of NOS1 by FMRP in the developing cerebral cortex. Cell. 149: 899-911. PMID 22579290 DOI: 10.1016/j.cell.2012.02.060  0.68
2012 Sousa A, Fernandes A, Mateus N, De Freitas V. Synthesis and structural characterization of oaklin-catechins. Journal of Agricultural and Food Chemistry. 60: 1528-34. PMID 22243415 DOI: 10.1021/jf204408p  0.68
2012 Soares S, Sousa A, Mateus N, de Freitas V. Effect of condensed tannins addition on the astringency of red wines. Chemical Senses. 37: 191-8. PMID 22086902 DOI: 10.1093/chemse/bjr092  0.68
2012 Sousa A, Mateus N, De Freitas V. A novel reaction mechanism for the formation of deoxyanthocyanidins Tetrahedron Letters. 53: 1300-1303. DOI: 10.1016/j.tetlet.2012.01.006  0.68
2011 Kang HJ, Kawasawa YI, Cheng F, Zhu Y, Xu X, Li M, Sousa AM, Pletikos M, Meyer KA, Sedmak G, Guennel T, Shin Y, Johnson MB, Krsnik Z, Mayer S, et al. Spatio-temporal transcriptome of the human brain. Nature. 478: 483-9. PMID 22031440 DOI: 10.1038/nature10523  0.68
2011 Fernandes A, Sousa A, Mateus N, Cabral M, de Freitas V. Analysis of phenolic compounds in cork from Quercus suber L. by HPLC-DAD/ESI-MS Food Chemistry. 125: 1398-1405. DOI: 10.1016/j.foodchem.2010.10.016  0.68
2010 Sousa A, Mateus N, Silva AM, Vivas N, Nonier MF, Pianet I, de Freitas V. Isolation and structural characterization of anthocyanin-furfuryl pigments. Journal of Agricultural and Food Chemistry. 58: 5664-9. PMID 20394421 DOI: 10.1021/jf1000327  0.68
2010 Santos MJ, Cavaleiro F, Campos P, Sousa A, Teixeira F, Martins M. Impact of amoeba and scuticociliatidia infections on the aquaculture European sea bass (Dicentrarchus labrax L.) in Portugal. Veterinary Parasitology. 171: 15-21. PMID 20371152 DOI: 10.1016/j.vetpar.2010.03.013  0.68
2010 Anquetil N, Kulesza U, Mitschke R, Moreira A, Royer JC, Rummler A, Sousa A. A model-driven traceability framework for software product lines Software and Systems Modeling. 9: 427-451. DOI: 10.1007/s10270-009-0120-9  0.68
2008 Borges MT, Sousa A, De Marco P, Matos A, Hönigová P, Castro PM. Aerobic and anoxic growth and nitrate removal capacity of a marine denitrifying bacterium isolated from a recirculation aquaculture system. Microbial Ecology. 55: 107-18. PMID 17674087 DOI: 10.1007/s00248-007-9256-8  0.68
2008 Alférez M, Kulesza U, Sousa A, Santos J, Moreira A, Araújo J, Amaral V. A model-driven approach for software product lines requirements engineering 20th International Conference On Software Engineering and Knowledge Engineering, Seke 2008. 779-784.  0.68
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