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Bradly J. Alicea - Publications

Affiliations: 
Orthogonal Research, OpenWorm Foundation 
Area:
Computational/Systems Biology, Cellular Reprogramming, Evolution of Development, Cognitive Systems
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Alicea B, Gordon R, Portegys TE. Data-Theoretical Synthesis of the Early Developmental Process. Neuroinformatics. PMID 33449345 DOI: 10.1007/s12021-020-09508-1  0.305
2020 Alicea B. Raising the Connectome: The Emergence of Neuronal Activity and Behavior in Caenorhabditis elegans Frontiers in Cellular Neuroscience. 14. PMID 33100971 DOI: 10.3389/Fncel.2020.524791  0.754
2018 Alicea B, Portegys TE, Gordon D, Gordon R. Morphogenetic processes as data: Quantitative structure in the Drosophila eye imaginal disc. Bio Systems. 173: 256-265. PMID 30554604 DOI: 10.1016/J.Biosystems.2018.10.005  0.741
2018 Igamberdiev AU, Gordon R, Alicea B, Cherdantsev VG. Computational, theoretical, and experimental approaches to morphogenesis. Bio Systems. PMID 30278202 DOI: 10.1016/J.Biosystems.2018.09.018  0.702
2018 Alicea B, Gordon R. Cell differentiation processes as spatial networks: Identifying four-dimensional structure in embryogenesis. Bio Systems. PMID 30278201 DOI: 10.1016/J.Biosystems.2018.09.009  0.752
2018 Alicea B. The emergent connectome in Caenorhabditis elegans embryogenesis. Biosystems. 173: 247-255. PMID 30268923 DOI: 10.1016/J.Biosystems.2018.09.016  0.746
2018 Sarma GP, Lee CW, Portegys T, Ghayoomie V, Jacobs T, Alicea B, Cantarelli M, Currie M, Gerkin RC, Gingell S, Gleeson P, Gordon R, Hasani RM, Idili G, Khayrulin S, et al. OpenWorm: overview and recent advances in integrative biological simulation of . Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201845 DOI: 10.1098/Rstb.2017.0382  0.734
2018 Stone R, Portegys T, Mikhailovsky G, Alicea B. Origins of the Embryo: Self-organization through cybernetic regulation. Bio Systems. PMID 30134151 DOI: 10.1016/J.Biosystems.2018.08.005  0.746
2018 Weber R, Alicea B, Huskey R, Mathiak K. Network Dynamics of Attention During a Naturalistic Behavioral Paradigm. Frontiers in Human Neuroscience. 12: 182. PMID 29780313 DOI: 10.3389/Fnhum.2018.00182  0.722
2016 Alicea B. Evolution in eggs and phases: experimental evolution of fecundity and reproductive timing in Caenorhabditis elegans. Royal Society Open Science. 3: 160496. PMID 28018635 DOI: 10.1098/Rsos.160496  0.714
2016 Alicea B, Gordon R. Quantifying Mosaic Development: Towards an Evo-Devo Postmodern Synthesis of the Evolution of Development via Differentiation Trees of Embryos. Biology. 5. PMID 27548240 DOI: 10.3390/Biology5030033  0.726
2014 Alicea B, Gordon R. Toy models for macroevolutionary patterns and trends. Bio Systems. 123: 54-66. PMID 25224014 DOI: 10.1016/J.Biosystems.2014.09.007  0.742
2014 Alicea B. Animal-oriented virtual environments: illusion, dilation, and discovery F1000research. 3: 202. DOI: 10.12688/F1000Research.3557.2  0.739
2013 Alicea B, Murthy S, Keaton SA, Cobbett P, Cibelli JB, Suhr ST. Defining the diversity of phenotypic respecification using multiple cell lines and reprogramming regimens. Stem Cells and Development. 22: 2641-54. PMID 23672680 DOI: 10.1089/Scd.2013.0040  0.727
2012 Alicea B. Contextual Geometric Structures: modeling the fundamental components of cultural behavior Artificial Life. 13: 147-154. DOI: 10.7551/978-0-262-31050-5-Ch021  0.736
2011 Bohil CJ, Alicea B, Biocca FA. Virtual reality in neuroscience research and therapy. Nature Reviews. Neuroscience. 12: 752-62. PMID 22048061 DOI: 10.1038/Nrn3122  0.72
2011 Alicea B. Formal Systems Architectures for Biology Nature Precedings. 6: 1-1. DOI: 10.1038/Npre.2011.6369.2  0.729
2011 Alicea B. Control in technological systems and physical intelligence: an emerging theory Nature Precedings. DOI: 10.1038/Npre.2011.5910.1  0.71
2009 Alicea BJ. Stochastic Resonance Can Drive Adaptive Physiological Processes Nature Precedings. 4: 1-1. DOI: 10.1038/Npre.2009.3301.1  0.725
2009 Alicea BJ. Range-based techniques for discovering optimality and analyzing scaling relationships in neuromechanical systems Nature Precedings. 4: 1-1. DOI: 10.1038/Npre.2009.2845.2  0.721
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