Simon Joly - Publications

Affiliations: 
IRBV-Montreal 

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Leménager M, Burkiewicz J, Schoen DJ, Joly S. Studying flowers in 3D using photogrammetry. The New Phytologist. PMID 36263728 DOI: 10.1111/nph.18553  0.513
2021 Joly S, Schoen DJ. Repeated evolution of a reproductive polyphenism in plants is strongly associated with bilateral flower symmetry. Current Biology : Cb. PMID 33539770 DOI: 10.1016/j.cub.2021.01.009  0.625
2020 Gaboriau T, Mendes FK, Joly S, Silvestro D, Salamin N. A multi‐platform package for the analysis of intra‐ and interspecific trait evolution Methods in Ecology and Evolution. DOI: 10.1111/2041-210X.13458  0.321
2018 Lee-Yaw JA, Grassa CJ, Joly S, Andrew RL, Rieseberg LH. An evaluation of alternative explanations for widespread cytonuclear discordance in annual sunflowers (Helianthus). The New Phytologist. PMID 30136727 DOI: 10.1111/Nph.15386  0.404
2018 Yergeau E, Tremblay J, Joly S, Labrecque M, Maynard C, Pitre FE, St-Arnaud M, Greer CW. Soil contamination alters the willow root and rhizosphere metatranscriptome and the root-rhizosphere interactome. The Isme Journal. PMID 29330533 DOI: 10.1038/S41396-017-0018-4  0.35
2017 Alexandre H, Faure J, Ginzbarg S, Clark J, Joly S. Bioclimatic niches are conserved and unrelated to pollination syndromes in Antillean Gesneriaceae. Royal Society Open Science. 4: 170293. PMID 29291050 DOI: 10.1098/Rsos.170293  0.436
2017 Joly S, Lambert F, Alexandre H, Clavel J, Léveillé-Bourret É, Clark JL. Greater pollination generalization is not associated with reduced constraints on corolla shape in Antillean plants. Evolution; International Journal of Organic Evolution. PMID 29235117 DOI: 10.1111/Evo.13410  0.428
2017 Yanitch A, Brereton NJB, Gonzalez E, Labrecque M, Joly S, Pitre FE. Transcriptomic Response of Purple Willow (Salix purpurea) to Arsenic Stress. Frontiers in Plant Science. 8: 1115. PMID 28702037 DOI: 10.3389/Fpls.2017.01115  0.352
2017 Lambert F, Clark JL, Joly S. Species delimitation in the Caribbean Gesneria viridiflora complex (Gesneriaceae) reveals unsuspected endemism Taxon. 66: 1171-1183. DOI: 10.12705/665.10  0.335
2017 Joly S, Archambault A, Pellerin S, Nault A. Genetic structure of the American ginseng (Panax quinquefolius L.) in Eastern Canada using reduced-representation high-throughput sequencing Botany. 95: 429-434. DOI: 10.1139/Cjb-2016-0144  0.384
2016 Lavoie C, Joly S, Bergeron A, Guay G, Groeneveld E. Explaining naturalization and invasiveness: new insights from historical ornamental plant catalogs. Ecology and Evolution. 6: 7188-7198. PMID 28725391 DOI: 10.1002/Ece3.2471  0.392
2016 Brereton NJ, Gonzalez E, Marleau J, Nissim WG, Labrecque M, Joly S, Pitre FE. Comparative Transcriptomic Approaches Exploring Contamination Stress Tolerance in Salix sp. Reveal the Importance for a Metaorganismal de Novo Assembly Approach for Nonmodel Plants. Plant Physiology. 171: 3-24. PMID 27002060 DOI: 10.1104/Pp.16.00090  0.356
2016 Vriendt LD, Lemay M, Jean M, Renaut S, Pellerin S, Joly S, Belzile F, Poulin M. Population isolation shapes plant genetics, phenotype and germination in naturally patchy ecosystems Journal of Plant Ecology. 10: 649-659. DOI: 10.1093/Jpe/Rtw071  0.382
2015 Ngo Ngwe MF, Omokolo DN, Joly S. Evolution and Phylogenetic Diversity of Yam Species (Dioscorea spp.): Implication for Conservation and Agricultural Practices. Plos One. 10: e0145364. PMID 26691919 DOI: 10.1371/Journal.Pone.0145364  0.416
2015 Alexandre H, Vrignaud J, Mangin B, Joly S. Genetic architecture of pollination syndrome transition between hummingbird-specialist and generalist species in the genus Rhytidophyllum (Gesneriaceae). Peerj. 3: e1028. PMID 26157613 DOI: 10.7717/Peerj.1028  0.393
2015 Paquette A, Joly S, Messier C. Explaining forest productivity using tree functional traits and phylogenetic information: two sides of the same coin over evolutionary scale? Ecology and Evolution. 5: 1774-83. PMID 26140194 DOI: 10.1002/Ece3.1456  0.363
2015 Fougère-Danezan M, Joly S, Bruneau A, Gao XF, Zhang LB. Phylogeny and biogeography of wild roses with specific attention to polyploids. Annals of Botany. 115: 275-91. PMID 25550144 DOI: 10.1093/Aob/Mcu245  0.369
2015 Joly S, Bryant D, Lockhart PJ. Flexible methods for estimating genetic distances from single nucleotide polymorphisms Methods in Ecology and Evolution. DOI: 10.1111/2041-210X.12343  0.348
2014 Joly S, Heenan PB, Lockhart PJ. Species radiation by niche shifts in New Zealand's rockcresses (Pachycladon, Brassicaceae). Systematic Biology. 63: 192-202. PMID 24335427 DOI: 10.1093/Sysbio/Syt104  0.325
2014 Joly S, Davies TJ, Archambault A, Bruneau A, Derry A, Kembel SW, Peres-Neto P, Vamosi J, Wheeler TA. Ecology in the age of DNA barcoding: the resource, the promise and the challenges ahead. Molecular Ecology Resources. 14: 221-32. PMID 24118947 DOI: 10.1111/1755-0998.12173  0.322
2014 Léveillé-Bourret É, Bailleul SM, Cayouette J, Joly S. Testing Hybridization Hypotheses with Morphometry: the Case of Eastern American Arctic Species of Potentilla sect. Niveae (Rosaceae) Systematic Botany. 39: 193-204. DOI: 10.1600/036364414X678017  0.363
2013 Ghose K, McCallum J, Fillmore S, Kirby C, Sanderson K, Joly S, Bruneau A, Fofana B. Structuration of the genetic and metabolite diversity among Prince Edward Island cultivated wild rose ecotypes Scientia Horticulturae. 160: 251-263. DOI: 10.1016/J.Scienta.2013.01.016  0.349
2012 Joly S. JML: testing hybridization from species trees. Molecular Ecology Resources. 12: 179-84. PMID 21899723 DOI: 10.1111/J.1755-0998.2011.03065.X  0.361
2011 Joly S, Schoen DJ. Migration rates, frequency-dependent selection and the self-incompatibility locus in Leavenworthia (brassicaceae). Evolution; International Journal of Organic Evolution. 65: 2357-69. PMID 21790581 DOI: 10.1111/J.1558-5646.2011.01300.X  0.615
2011 Busch JW, Joly S, Schoen DJ. Demographic signatures accompanying the evolution of selfing in Leavenworthia alabamica. Molecular Biology and Evolution. 28: 1717-29. PMID 21199892 DOI: 10.1093/Molbev/Msq352  0.649
2010 Busch JW, Joly S, Schoen DJ. Does mate limitation in self-incompatible species promote the evolution of selfing? The case of Leavenworthia alabamica. Evolution; International Journal of Organic Evolution. 64: 1657-70. PMID 20015234 DOI: 10.1111/J.1558-5646.2009.00925.X  0.675
2009 Joly S, Bruneau A. Measuring branch support in species trees obtained by gene tree parsimony. Systematic Biology. 58: 100-13. PMID 20525571 DOI: 10.1093/Sysbio/Syp013  0.38
2009 Joly S, McLenachan PA, Lockhart PJ. A statistical approach for distinguishing hybridization and incomplete lineage sorting. The American Naturalist. 174: E54-70. PMID 19519219 DOI: 10.1086/600082  0.387
2009 Joly S, Heenan PB, Lockhart PJ. A Pleistocene inter-tribal allopolyploidization event precedes the species radiation of Pachycladon (Brassicaceae) in New Zealand. Molecular Phylogenetics and Evolution. 51: 365-72. PMID 19254769 DOI: 10.1016/J.Ympev.2009.02.015  0.379
2007 Bruneau A, Starr JR, Joly S. Phylogenetic relationships in the genus Rosa: New evidence from chloroplast DNA sequences and an appraisal of current knowledge Systematic Botany. 32: 366-378. DOI: 10.1600/036364407781179653  0.389
2007 Joly S, Bruneau A. Delimiting Species Boundaries in Rosa Sect. Cinnamomeae (Rosaceae) in Eastern North America Systematic Botany. 32: 819-836. DOI: 10.1043/06-69.1  0.342
2006 Joly S, Starr JR, Lewis WH, Bruneau A. Polyploid and hybrid evolution in roses east of the Rocky Mountains. American Journal of Botany. 93: 412-25. PMID 21646201 DOI: 10.3732/Ajb.93.3.412  0.342
2006 Joly S, Bruneau A. Incorporating allelic variation for reconstructing the evolutionary history of organisms from multiple genes: An example from Rosa in North America. Systematic Biology. 55: 623-36. PMID 16969938 DOI: 10.1080/10635150600863109  0.388
2005 Bruneau A, Joly S, Starr JR, Drouin JN. Molecular markers indicate that the narrow Québec endemics Rosa rousseauiorum and Rosa williamsii are synonymous with the widespread Rosa blanda Canadian Journal of Botany. 83: 386-398. DOI: 10.1139/B05-012  0.359
2004 Joly S, Bruneau A. Evolution of triploidy in Apios americana (Leguminosae) revealed by genealogical analysis of the histone H3-D gene. Evolution; International Journal of Organic Evolution. 58: 284-95. PMID 15068346 DOI: 10.1111/J.0014-3820.2004.Tb01645.X  0.457
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