Kosuke Hashimoto - Publications

Affiliations: 
2009-2011 RIKEN 

8/106 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2013 Nishi H, Tyagi M, Teng S, Shoemaker BA, Hashimoto K, Alexov E, Wuchty S, Panchenko AR. Cancer missense mutations alter binding properties of proteins and their interaction networks. Plos One. 8: e66273. PMID 23799087 DOI: 10.1371/Journal.Pone.0066273  0.662
2013 Nishi H, Hashimoto K, Madej T, Panchenko AR. Evolutionary, physicochemical, and functional mechanisms of protein homooligomerization. Progress in Molecular Biology and Translational Science. 117: 3-24. PMID 23663963 DOI: 10.1016/B978-0-12-386931-9.00001-5  0.727
2012 Hashimoto K, Rogozin IB, Panchenko AR. Oncogenic potential is related to activating effect of cancer single and double somatic mutations in receptor tyrosine kinases. Human Mutation. 33: 1566-75. PMID 22753356 DOI: 10.1002/Humu.22145  0.605
2012 Tyagi M, Hashimoto K, Shoemaker BA, Wuchty S, Panchenko AR. Large-scale mapping of human protein interactome using structural complexes. Embo Reports. 13: 266-71. PMID 22261719 DOI: 10.1038/Embor.2011.261  0.697
2011 Nishi H, Hashimoto K, Panchenko AR. Phosphorylation in protein-protein binding: effect on stability and function. Structure (London, England : 1993). 19: 1807-15. PMID 22153503 DOI: 10.1016/J.Str.2011.09.021  0.7
2011 Hashimoto K, Nishi H, Bryant S, Panchenko AR. Caught in self-interaction: evolutionary and functional mechanisms of protein homooligomerization. Physical Biology. 8: 035007. PMID 21572178 DOI: 10.1088/1478-3975/8/3/035007  0.729
2010 Hashimoto K, Panchenko AR. Mechanisms of protein oligomerization, the critical role of insertions and deletions in maintaining different oligomeric states. Proceedings of the National Academy of Sciences of the United States of America. 107: 20352-7. PMID 21048085 DOI: 10.1073/Pnas.1012999107  0.716
2010 Hashimoto K, Madej T, Bryant SH, Panchenko AR. Functional states of homooligomers: insights from the evolution of glycosyltransferases. Journal of Molecular Biology. 399: 196-206. PMID 20381499 DOI: 10.1016/J.Jmb.2010.03.059  0.653
Low-probability matches (unlikely to be authored by this person)
2020 Kajihara D, Hon CC, Abdullah AN, Wosniak J, Moretti AIS, Poloni JF, Bonatto D, Hashimoto K, Carninci P, Laurindo FRM. Analysis of splice variants of the human protein disulfide isomerase (P4HB) gene. Bmc Genomics. 21: 766. PMID 33148170 DOI: 10.1186/s12864-020-07164-y  0.281
2012 Izumi Y, Li J, Villers C, Hashimoto K, Burg MB, Ferraris JD. Mutations that reduce its specific DNA binding inhibit high NaCl-induced nuclear localization of the osmoprotective transcription factor NFAT5. American Journal of Physiology. Cell Physiology. 303: C1061-9. PMID 22992674 DOI: 10.1152/ajpcell.00265.2012  0.259
2023 Koyama K, Hashimoto K, Nagao C, Mizuguchi K. Attention network for predicting T-cell receptor-peptide binding can associate attention with interpretable protein structural properties. Frontiers in Bioinformatics. 3: 1274599. PMID 38170146 DOI: 10.3389/fbinf.2023.1274599  0.256
2003 Kawano S, Okuno Y, Hashimoto K, Yamamoto H, Takematsu H, Kozutsumi Y, Goto S, Kanehisa M. Prediction of Glycan Structures from Glycosyltransferase Expression Profiles Genome Informatics. 14: 304-305. DOI: 10.11234/Gi1990.14.304  0.242
2022 Hashimoto K, Morisawa Y, Tortora M, Rossi B, Ozaki Y, Sato H. Attenuated Total Reflection Far-Ultraviolet (ATR Far-UV) Spectroscopy as a Sensitive Tool for the Investigation of Protein Adsorption. Applied Spectroscopy. 37028211070835. PMID 35081773 DOI: 10.1177/00037028211070835  0.24
2021 Hashimoto K, Jouhilahti EM, Töhönen V, Carninci P, Kere J, Katayama S. Embryonic LTR retrotransposons supply promoter modules to somatic tissues. Genome Research. 31: 1983-1993. PMID 34675070 DOI: 10.1101/gr.275354.121  0.24
2006 Hashimoto K, Goto S, Kawano S, Aoki-Kinoshita KF, Ueda N, Hamajima M, Kawasaki T, Kanehisa M. KEGG as a glycome informatics resource Glycobiology. 16: 63R-70R. PMID 16014746 DOI: 10.1093/Glycob/Cwj010  0.236
2004 Hizukuri Y, Yamanishi Y, Hashimoto K, Kanehisa M. Extraction of species-specific glycan substructures Genome Informatics. International Conference On Genome Informatics. 15: 69-81. PMID 15712111 DOI: 10.11234/Gi1990.15.69  0.234
2022 Vuoristo S, Bhagat S, Hydén-Granskog C, Yoshihara M, Gawriyski L, Jouhilahti EM, Ranga V, Tamirat M, Huhtala M, Kirjanov I, Nykänen S, Krjutškov K, Damdimopoulos A, Weltner J, Hashimoto K, et al. is a multifunctional factor priming human embryonic genome activation. Iscience. 25: 104137. PMID 35402882 DOI: 10.1016/j.isci.2022.104137  0.219
2017 Ishigaki M, Hashimoto K, Sato H, Ozaki Y. Non-destructive monitoring of mouse embryo development and its qualitative evaluation at the molecular level using Raman spectroscopy. Scientific Reports. 7: 43942. PMID 28272511 DOI: 10.1038/srep43942  0.203
2019 Watanabe K, Liu Y, Noguchi S, Murray M, Chang JC, Kishima M, Nishimura H, Hashimoto K, Minoda A, Suzuki H. OVOL2 induces mesenchymal-to-epithelial transition in fibroblasts and enhances cell-state reprogramming towards epithelial lineages. Scientific Reports. 9: 6490. PMID 31019211 DOI: 10.1038/s41598-019-43021-z  0.197
2016 Kaczkowski B, Hashimoto K, Carninci P. Epi-drivers and cancer-testis genes Translational Cancer Research. 5: 334-336. DOI: 10.21037/8232  0.196
2022 Takano J, Ito S, Dong Y, Sharif J, Nakajima-Takagi Y, Umeyama T, Han YW, Isono K, Kondo T, Iizuka Y, Miyai T, Koseki Y, Ikegaya M, Sakihara M, Nakayama M, ... ... Hashimoto K, et al. PCGF1-PRC1 links chromatin repression with DNA replication during hematopoietic cell lineage commitment. Nature Communications. 13: 7159. PMID 36443290 DOI: 10.1038/s41467-022-34856-8  0.189
2020 Ramilowski JA, Yip CW, Agrawal S, Chang JC, Ciani Y, Kulakovskiy IV, Mendez M, Ooi JLC, Ouyang JF, Parkinson N, Petri A, Roos L, Severin J, Yasuzawa K, Abugessaisa I, ... ... Hashimoto K, et al. Functional annotation of human long noncoding RNAs via molecular phenotyping. Genome Research. PMID 32718982 DOI: 10.1101/Gr.254219.119  0.18
2005 Hashimoto K, Kawano S, Goto S, Aoki-Kinoshita KF, Kawashima M, Kanehisa M. A global representation of the carbohydrate structures: a tool for the analysis of glycan. Genome Informatics. International Conference On Genome Informatics. 16: 214-22. PMID 16362924 DOI: 10.11234/Gi1990.16.214  0.178
2006 Binder B, Ebenhöh O, Hashimoto K, Heinrich R. Expansion of signal transduction networks. Systems Biology. 153: 364-8. PMID 16986318 DOI: 10.1049/ip-syb:20060030  0.178
2019 Pawlak M, Kedzierska KZ, Migdal M, Nahia KA, Ramilowski JA, Bugajski L, Hashimoto K, Marconi A, Piwocka K, Carninci P, Winata CL. Dynamics of cardiomyocyte transcriptome and chromatin landscape demarcates key events of heart development. Genome Research. PMID 30760547 DOI: 10.1101/Gr.244491.118  0.176
2009 Hashimoto K, Tokimatsu T, Kawano S, Yoshizawa AC, Okuda S, Goto S, Kanehisa M. Comprehensive analysis of glycosyltransferases in eukaryotic genomes for structural and functional characterization of glycans. Carbohydrate Research. 344: 881-7. PMID 19327755 DOI: 10.1016/J.Carres.2009.03.001  0.169
2015 Fort A, Yamada D, Hashimoto K, Koseki H, Carninci P. Nuclear transcriptome profiling of induced pluripotent stem cells and embryonic stem cells identify non-coding loci resistant to reprogramming. Cell Cycle (Georgetown, Tex.). 14: 1148-55. PMID 25664506 DOI: 10.4161/15384101.2014.988031  0.166
2020 Bonetti A, Agostini F, Suzuki AM, Hashimoto K, Pascarella G, Gimenez J, Roos L, Nash AJ, Ghilotti M, Cameron CJF, Valentine M, Medvedeva YA, Noguchi S, Agirre E, Kashi K, et al. RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions. Nature Communications. 11: 1018. PMID 32094342 DOI: 10.1038/S41467-020-14337-6  0.166
2021 Kobayashi K, Kaira K, Iemura H, Shinomiya S, Hashimoto K, Miura Y, Shiono A, Nishihara F, Kagamu H. Combination of immune check inhibitor and immunomodulatory arabinomannan extracted from : A case report. Molecular and Clinical Oncology. 15: 227. PMID 34631053 DOI: 10.3892/mco.2021.2390  0.165
2023 Kaira K, Imai H, Mouri A, Hashimoto K, Miura Y, Shiono A, Yamaguchi O, Kobayashi K, Kawasaki T, Yasuda M, Kagamu H. Clinicopathological impact of VEGFR2 and VEGF-C in patients with EGFR-major mutant NSCLC receiving osimertinib. Thoracic Cancer. PMID 37605832 DOI: 10.1111/1759-7714.15082  0.157
2014 Fort A, Hashimoto K, Yamada D, Salimullah M, Keya CA, Saxena A, Bonetti A, Voineagu I, Bertin N, Kratz A, Noro Y, Wong CH, de Hoon M, Andersson R, Sandelin A, et al. Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance. Nature Genetics. 46: 558-66. PMID 24777452 DOI: 10.1038/Ng.2965  0.156
2007 Suga A, Yamanishi Y, Hashimoto K, Goto S, Kanehisa M. An improved scoring scheme for predicting glycan structures from gene expression data. Genome Informatics. International Conference On Genome Informatics. 18: 237-46. PMID 18546491 DOI: 10.11234/Gi1990.18.237  0.152
2022 Pascarella G, Hon CC, Hashimoto K, Busch A, Luginbühl J, Parr C, Hin Yip W, Abe K, Kratz A, Bonetti A, Agostini F, Severin J, Murayama S, Suzuki Y, Gustincich S, et al. Recombination of repeat elements generates somatic complexity in human genomes. Cell. 185: 3025-3040.e6. PMID 35882231 DOI: 10.1016/j.cell.2022.06.032  0.15
2020 Yamaguchi O, Kaira K, Kawasaki T, Mouri A, Hashimoto K, Shiono A, Shinomiya S, Miura Y, Nishihara F, Murayama Y, Kobayashi K, Mochida S, Kagamu H. Severe hepatotoxicity due to osimertinib after nivolumab therapy in patients with non-small cell lung cancer harboring EGFR mutation. Thoracic Cancer. PMID 32068351 DOI: 10.1111/1759-7714.13363  0.145
2010 Hashimoto K, Kanehisa M. KEGG GLYCAN for integrated analysis of pathways, genes, and glycan structures Handbook of Glycomics. 197-210. DOI: 10.1016/B978-0-12-373600-0.00009-3  0.145
2019 Yamaguchi O, Kaira K, Mouri A, Shiono A, Hashimoto K, Miura Y, Nishihara F, Murayama Y, Kobayashi K, Kagamu H. Re-challenge of afatinib after 1st generation EGFR-TKI failure in patients with previously treated non-small cell lung cancer harboring EGFR mutation. Cancer Chemotherapy and Pharmacology. PMID 30758646 DOI: 10.1007/s00280-019-03790-w  0.143
2008 Hashimoto K, Yoshizawa AC, Okuda S, Kuma K, Goto S, Kanehisa M. The repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomes. Journal of Lipid Research. 49: 183-91. PMID 17921532 DOI: 10.1194/Jlr.M700377-Jlr200  0.132
2015 Tebbi A, Levillayer F, Jouvion G, Fiette L, Soubigou G, Varet H, Boudjadja N, Cairo S, Hashimoto K, Suzuki AM, Carninci P, Carissimo A, di Bernado D, Wei Y. Deficiency of multidrug resistance 2 contributes to cell transformation through oxidative stress. Carcinogenesis. PMID 26542370 DOI: 10.1093/Carcin/Bgv156  0.13
2019 Yamaguchi O, Kaira K, Mouri A, Shiono A, Hashimoto K, Miura Y, Nishihara F, Murayama Y, Kobayashi K, Kagamu H. Correction to: Re-challenge of afatinib after 1st generation EGFR-TKI failure in patients with previously treated non-small cell lung cancer harboring EGFR mutation. Cancer Chemotherapy and Pharmacology. PMID 31705267 DOI: 10.1007/s00280-019-03984-2  0.13
2021 Bonetti A, Agostini F, Suzuki AM, Hashimoto K, Pascarella G, Gimenez J, Roos L, Nash AJ, Ghilotti M, Cameron CJF, Valentine M, Medvedeva YA, Noguchi S, Agirre E, Kashi K, et al. Author Correction: RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions. Nature Communications. 12: 3128. PMID 34011993 DOI: 10.1038/s41467-021-23542-w  0.129
2008 Hashimoto K, Takigawa I, Shiga M, Kanehisa M, Mamitsuka H. Mining significant tree patterns in carbohydrate sugar chains. Bioinformatics (Oxford, England). 24: i167-73. PMID 18689820 DOI: 10.1093/bioinformatics/btn293  0.125
2015 Taguchi A, Nagasaka K, Kawana K, Hashimoto K, Kusumoto-Matsuo R, Plessy C, Thomas M, Nakamura H, Bonetti A, Oda K, Kukimoto I, Carninci P, Banks L, Osuga Y, Fujii T. Characterization of novel transcripts of human papillomavirus type 16 using cap analysis gene expression technology. Journal of Virology. 89: 2448-52. PMID 25505068 DOI: 10.1128/Jvi.03433-14  0.124
2003 Hashimoto K, Hamajima M, Goto S, Masumoto S, Kawasima M, Kanehisa M. GLYCAN: The Database of Carbohydrate Structures Genome Informatics. 14: 649-650. DOI: 10.11234/Gi1990.14.649  0.122
2024 Hashimoto K, Miwa T, Ono C, Nara K, Mutai H, Seto T, Sakamoto H, Matsunaga T. Gap Junction Beta-2 p.Val84Met Can Cause Autosomal Dominant Syndromic Hearing Loss With Keratoderma. Cureus. 16: e54992. PMID 38550477 DOI: 10.7759/cureus.54992  0.12
2024 Hashimoto K, Kaira K, Imai H, Miura YU, Shiono A, Mouri A, Yamaguchi OU, Kobayashi K, Kagamu H, Kuji I. Metabolic Tumor Volume as Significant Predictor for Chemotherapy Containing PD-L1 Blocker in Extensive Stage Small Cell Lung Cancer. Anticancer Research. 44: 1541-1551. PMID 38537960 DOI: 10.21873/anticanres.16951  0.12
2006 Hashimoto K, Yoshizawa AC, Saito K, Yamada T, Kanehisa M. The repertoire of desaturases for unsaturated fatty acid synthesis in 397 genomes. Genome Informatics. International Conference On Genome Informatics. 17: 173-83. PMID 17503367 DOI: 10.11234/Gi1990.17.173  0.118
2005 Kawano S, Hashimoto K, Miyama T, Goto S, Kanehisa M. Prediction of glycan structures from gene expression data based on glycosyltransferase reactions. Bioinformatics (Oxford, England). 21: 3976-82. PMID 16159923 DOI: 10.1093/Bioinformatics/Bti666  0.117
2022 Hayakawa M, Taylor JN, Nakao R, Mochizuki K, Sawai Y, Hashimoto K, Tabata K, Kumamoto Y, Fujita K, Konishi E, Hirano S, Tanaka H, Komatsuzaki T, Harada Y. Lipid droplet accumulation and adipophilin expression in follicular thyroid carcinoma. Biochemical and Biophysical Research Communications. 640: 192-201. PMID 36521425 DOI: 10.1016/j.bbrc.2022.12.007  0.117
2015 Hashimoto K, Suzuki AM, Dos Santos A, Desterke C, Collino A, Ghisletti S, Braun E, Bonetti A, Fort A, Qin XY, Radaelli E, Kaczkowski B, Forrest AR, Kojima S, Samuel D, et al. CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors. Genome Research. PMID 26510915 DOI: 10.1101/Gr.191031.115  0.116
2020 Abugessaisa I, Ramilowski JA, Lizio M, Severin J, Hasegawa A, Harshbarger J, Kondo A, Noguchi S, Yip CW, Ooi JLC, Tagami M, Hori F, Agrawal S, Hon CC, Cardon M, ... ... Hashimoto K, et al. FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs. Nucleic Acids Research. PMID 33211864 DOI: 10.1093/nar/gkaa1054  0.115
2019 Yamanaka S, Nishihara H, Toh H, Eijy Nagai LA, Hashimoto K, Park SJ, Shibuya A, Suzuki AM, Tanaka Y, Nakai K, Carninci P, Sasaki H, Siomi H. Broad Heterochromatic Domains Open in Gonocyte Development Prior to De Novo DNA Methylation. Developmental Cell. PMID 31474564 DOI: 10.1016/J.Devcel.2019.07.023  0.108
2019 Taylor JN, Mochizuki K, Hashimoto K, Kumamoto Y, Harada Y, Fujita K, Komatsuzaki T. High-Resolution Raman Microscopic Detection of Follicular Thyroid Cancer Cells with Unsupervised Machine Learning. The Journal of Physical Chemistry. B. PMID 31035762 DOI: 10.1021/acs.jpcb.9b01159  0.105
2020 Ramilowski JA, Yip CW, Agrawal S, Chang J, Ciani Y, Kulakovskiy IV, Mendez M, Ooi JLC, Ouyang JF, Parkinson N, Petri A, Roos L, Severin J, Yasuzawa K, Abugessaisa I, ... ... Hashimoto K, et al. Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping Genome Research. 30: 1377-1-1377-1. DOI: 10.1101/Gr.270330.120  0.101
2016 Altinel K, Hashimoto K, Wei Y, Neuveut C, Gupta I, Suzuki AM, Dos Santos A, Moreau P, Xia T, Kojima S, Kato S, Takikawa Y, Hidaka I, Shimizu M, Matsuura T, et al. Single-nucleotide-resolution mapping of HBV promoters in infected human livers and hepatocellular carcinoma. Journal of Virology. PMID 27681123 DOI: 10.1128/Jvi.01625-16  0.101
2008 Hashimoto K, Aoki-Kinoshita KF, Ueda N, Kanehisa M, Mamitsuka H. A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology Acm Transactions On Knowledge Discovery From Data. 2. DOI: 10.1145/1342320.1342326  0.099
2022 Yamaguchi O, Atarashi K, Yoshimura K, Shiono A, Mouri A, Nishihara F, Miura Y, Hashimoto K, Miyamoto Y, Uga H, Seki N, Matsushima T, Kikukawa N, Kobayashi K, Kaira K, et al. Establishing a whole blood CD4 T cell immunity measurement to predict response to anti-PD-1. Bmc Cancer. 22: 1325. PMID 36528575 DOI: 10.1186/s12885-022-10445-2  0.095
2023 Yanagihara A, Yamasaki S, Hashimoto K, Taguchi R, Umesaki T, Imai H, Kaira K, Nitanda H, Sakaguchi H, Ishida H, Kobayashi K, Horimoto K, Kagamu H. A Th1-like CD4 T-cell Cluster That Predicts Disease-free Survival in Early-stage Lung Cancer. Cancer Research Communications. 3: 1277-1285. PMID 37476074 DOI: 10.1158/2767-9764.CRC-23-0167  0.087
2023 Watanabe R, Hashimoto K, Higashisaka K, Haga Y, Tsutsumi Y, Mizuguchi K. Evidence-Based Prediction of Cellular Toxicity for Amorphous Silica Nanoparticles. Acs Nano. 17: 9987-9999. PMID 37254442 DOI: 10.1021/acsnano.2c11968  0.086
2021 Kaira K, Kobayashi K, Shiono A, Yamaguchi O, Hashimoto K, Mouri A, Shinomiya S, Miura Y, Imai H, Kagamu H. Effectiveness of EGFR-TKI rechallenge immediately after PD-1 blockade failure. Thoracic Cancer. PMID 33522139 DOI: 10.1111/1759-7714.13864  0.084
2020 Taguchi A, Nagasaka K, Plessy C, Nakamura H, Kawata Y, Kato S, Hashimoto K, Nagamatsu T, Oda K, Kukimoto I, Kawana K, Carninci P, Osuga Y, Fujii T. Use of Cap Analysis Gene Expression to detect human papillomavirus promoter activity patterns at different disease stages. Scientific Reports. 10: 17991. PMID 33093512 DOI: 10.1038/s41598-020-75133-2  0.084
2019 Yamaguchi O, Kaira K, Hashimoto K, Mouri A, Miura Y, Shiono A, Nishihara F, Murayama Y, Noda SE, Kato S, Kobayashi K, Kagamu H. Radiotherapy is an independent prognostic marker of favorable prognosis in non-small cell lung cancer patients after treatment with the immune checkpoint inhibitor, nivolumab. Thoracic Cancer. PMID 30888716 DOI: 10.1111/1759-7714.13044  0.083
2008 Hashimoto K, Goto S, Kanehisa M. [KEGG GLYCAN and glycome informatics]. Tanpakushitsu Kakusan Koso. Protein, Nucleic Acid, Enzyme. 53: 1698-702. PMID 21089391  0.083
2023 Yamaguchi O, Kaira K, Imai H, Mouri A, Shiono A, Miura Y, Hashimoto K, Kobayashi K, Kagamu H. Clinical utility of inflammatory and nutritious index as therapeutic prediction of nivolumab plus ipilimumab in advanced NSCLC. Oncology. PMID 37725914 DOI: 10.1159/000534169  0.08
2018 Qin XY, Suzuki H, Honda M, Okada H, Kaneko S, Inoue I, Ebisui E, Hashimoto K, Carninci P, Kanki K, Tatsukawa H, Ishibashi N, Masaki T, Matsuura T, Kagechika H, et al. Prevention of hepatocellular carcinoma by targeting MYCN-positive liver cancer stem cells with acyclic retinoid. Proceedings of the National Academy of Sciences of the United States of America. PMID 29686061 DOI: 10.1073/Pnas.1802279115  0.078
2022 Hashimoto K, Kaira K, Imai H, Mouri A, Shiono A, Miura Y, Yamaguchi O, Kobayashi K, Kagamu H, Kuji I. Prognostic Potential of Metabolic Activity on 18F-FDG Accumulation in Advanced NSCLC Receiving Combining Chemotherapy Plus PD-1 Blockade. Journal of Immunotherapy (Hagerstown, Md. : 1997). PMID 35980360 DOI: 10.1097/CJI.0000000000000434  0.077
2021 Paramitha PN, Zakaria R, Maryani A, Kusaka Y, Andriana BB, Hashimoto K, Nakazawa H, Kato S, Sato H. Raman Study on Lipid Droplets in Hepatic Cells Co-Cultured with Fatty Acids. International Journal of Molecular Sciences. 22. PMID 34298998 DOI: 10.3390/ijms22147378  0.075
2015 Konno D, Kasukawa T, Hashimoto K, Itoh T, Suetsugu T, Miura I, Wakana S, Carninci P, Matsuzaki F. STAP cells are derived from ES cells. Nature. 525: E4-5. PMID 26399834 DOI: 10.1038/Nature15366  0.073
2017 de Rie D, Abugessaisa I, Alam T, Arner E, Arner P, Ashoor H, Åström G, Babina M, Bertin N, Burroughs AM, Carlisle AJ, Daub CO, Detmar M, Deviatiiarov R, Fort A, ... ... Hashimoto K, et al. An integrated expression atlas of miRNAs and their promoters in human and mouse. Nature Biotechnology. PMID 28829439 DOI: 10.1038/Nbt.3947  0.072
2022 Kagamu H, Yamasaki S, Kitano S, Yamaguchi O, Mouri A, Shiono A, Nishihara F, Miura Y, Hashimoto K, Imai H, Kaira K, Kobayashi K, Kanai Y, Shibata T, Horimoto K. Single-cell analysis reveals a CD4+ T cell cluster that correlates with PD-1 blockade efficacy. Cancer Research. PMID 36219677 DOI: 10.1158/0008-5472.CAN-22-0112  0.071
2019 Mouri A, Kaira K, Yamaguchi O, Shiono A, Miura Y, Hashimoto K, Nishihara F, Murayama Y, Kobayashi K, Kagamu H. Clinical difference between discontinuation and retreatment with nivolumab after immune-related adverse events in patients with lung cancer. Cancer Chemotherapy and Pharmacology. PMID 31444618 DOI: 10.1007/s00280-019-03926-y  0.07
2022 Hashimoto K, Ide S, Arata M, Nakata A, Ito A, Ito TK, Kudo N, Lin B, Nunomura K, Tsuganezawa K, Yoshida M, Nagaoka Y, Sumiyoshi T. Discovery of Benzylpiperazine Derivatives as CNS-Penetrant and Selective Histone Deacetylase 6 Inhibitors. Acs Medicinal Chemistry Letters. 13: 1077-1082. PMID 35859864 DOI: 10.1021/acsmedchemlett.2c00081  0.07
2023 Mouri A, Kaira K, Yamaguchi O, Hashimoto K, Miura Y, Shiono A, Kawasaki T, Kobayashi K, Imai H, Kagamu H. Clinical significance of antinuclear antibody as prognostic marker for first-line pembrolizumab in advanced non-small cell lung cancer. International Journal of Clinical Oncology. PMID 38160406 DOI: 10.1007/s10147-023-02445-4  0.069
2019 Uchida T, Kaira K, Yamaguchi O, Mouri A, Shiono A, Miura Y, Hashimoto K, Nishihara F, Murayama Y, Kobayashi K, Kagamu H. Different incidence of interstitial lung disease according to different kinds of EGFR-tyrosine kinase inhibitors administered immediately before and/or after anti-PD-1 antibodies in lung cancer. Thoracic Cancer. PMID 30864291 DOI: 10.1111/1759-7714.13039  0.069
2019 Kumamoto Y, Mochizuki K, Hashimoto K, Harada Y, Tanaka H, Fujita K. High-Throughput Cell Imaging and Classification by Narrowband and Low-Spectral-Resolution Raman Microscopy. The Journal of Physical Chemistry. B. PMID 30830787 DOI: 10.1021/acs.jpcb.8b11295  0.068
2015 Nagasaka K, Taguchi A, Kawana K, Hashimoto K, Plessy C, Nakamura H, Thomas M, Oda K, Kukimoto I, Carninci P, Banks L, Osuga Y, Fujii T. A new approach for screening cervical cancer by characterization of transcripts using CAGE technology. Journal of Clinical Oncology. 33: e16514-e16514. DOI: 10.1200/Jco.2015.33.15_Suppl.E16514  0.067
2020 Miura Y, Mouri A, Kaira K, Yamaguchi O, Shiono A, Hashimoto K, Nishihara F, Shinomiya S, Akagami T, Murayama Y, Abe T, Noda SE, Kato S, Kobayashi K, Kagamu H. Chemoradiotherapy followed by durvalumab in patients with unresectable advanced non-small cell lung cancer: Management of adverse events. Thoracic Cancer. PMID 32160383 DOI: 10.1111/1759-7714.13394  0.066
2021 Imai H, Yamaguchi O, Mori K, Hashimoto K, Akagami T, Shinomiya S, Miura Y, Shiono A, Mouri A, Kaira K, Kobayashi K, Kagamu H. Clinical impact of post-progression survival on overall survival in patients receiving nivolumab monotherapy as a second-line treatment for advanced non-small cell lung cancer. Thoracic Cancer. PMID 33626218 DOI: 10.1111/1759-7714.13886  0.065
2020 Yamaguchi O, Kaira K, Shinomiya S, Mouri A, Hashimoto K, Shiono A, Miura Y, Akagami T, Imai H, Kobayashi K, Kagamu H. Pre-existing interstitial lung disease does not affect prognosis in non-small cell lung cancer patients with PD-L1 expression ≥50% on first-line pembrolizumab. Thoracic Cancer. PMID 33185333 DOI: 10.1111/1759-7714.13725  0.063
2019 Valentine MNZ, Hashimoto K, Fukuhara T, Saiki S, Ishikawa KI, Hattori N, Carninci P. Multi-year whole-blood transcriptome data for the study of onset and progression of Parkinson's Disease. Scientific Data. 6: 20. PMID 30952910 DOI: 10.1038/S41597-019-0022-9  0.063
2022 Imai H, Naito E, Yamaguchi O, Hashimoto K, Iemura H, Miura Y, Shiono A, Mouri A, Kaira K, Kobayashi K, Kagamu H. Pretreatment body mass index predicts survival among patients administered nivolumab monotherapy for pretreated non-small cell lung cancer. Thoracic Cancer. PMID 35394119 DOI: 10.1111/1759-7714.14417  0.063
2023 Taylor JN, Pélissier A, Mochizuki K, Hashimoto K, Kumamoto Y, Harada Y, Fujita K, Bocklitz T, Komatsuzaki T. Correction for Extrinsic Background in Raman Hyperspectral Images. Analytical Chemistry. 95: 12298-12305. PMID 37561910 DOI: 10.1021/acs.analchem.3c01406  0.06
2019 Hashimoto K, Kouno T, Ikawa T, Hayatsu N, Miyajima Y, Yabukami H, Terooatea T, Sasaki T, Suzuki T, Valentine M, Pascarella G, Okazaki Y, Suzuki H, Shin JW, Minoda A, et al. Single-cell transcriptomics reveals expansion of cytotoxic CD4 T cells in supercentenarians. Proceedings of the National Academy of Sciences of the United States of America. PMID 31719197 DOI: 10.1073/Pnas.1907883116  0.058
2019 Shiono A, Kaira K, Mouri A, Yamaguchi O, Hashimoto K, Uchida T, Miura Y, Nishihara F, Murayama Y, Kobayashi K, Kagamu H. Improved efficacy of ramucirumab plus docetaxel after nivolumab failure in previously treated non-small cell lung cancer patients. Thoracic Cancer. PMID 30809973 DOI: 10.1111/1759-7714.12998  0.057
2020 Yamaguchi O, Kaira K, Hashimoto K, Mouri A, Shiono A, Miura Y, Murayama Y, Kobayashi K, Kagamu H, Kuji I. Tumor metabolic volume by F-FDG-PET as a prognostic predictor of first-line pembrolizumab for NSCLC patients with PD-L1 ≥ 50. Scientific Reports. 10: 14990. PMID 32929123 DOI: 10.1038/s41598-020-71735-y  0.055
2023 Kaira K, Yamaguchi O, Naruse I, Umeda Y, Honda T, Watanabe S, Ichikawa K, Yanagisawa S, Kasahara N, Higuchi T, Hashimoto K, Miura Y, Shiono A, Mouri A, Imai H, et al. Comparative analysis of different response criteria at early phase after PD-1 blockade in non-small lung cancer. Cancer Imaging : the Official Publication of the International Cancer Imaging Society. 23: 23. PMID 36859341 DOI: 10.1186/s40644-023-00538-x  0.054
2021 Mouri A, Kaira K, Yamaguchi O, Hashimoto K, Miura Y, Shiono A, Shinomiya S, Akagami T, Imai H, Kobayashi K, Kagamu H. Efficacy and Feasibility of Programmed Death-1/Programmed Death Ligand-1 Blockade Therapy in Non-Small Cell Lung Cancer Patients With High Antinuclear Antibody Titers. Frontiers in Oncology. 11: 610952. PMID 33791204 DOI: 10.3389/fonc.2021.610952  0.053
2019 Kagamu H, Kitano S, Yamaguchi O, Yoshimura K, Horimoto K, Kitazawa M, Fukui K, Shiono A, Mouri A, Nishihara F, Miura Y, Hashimoto K, Murayama Y, Kaira K, Kobayashi K. CD4+ T-cell immunity in the peripheral blood correlates with response to anti-PD-1 therapy. Cancer Immunology Research. PMID 31871122 DOI: 10.1158/2326-6066.Cir-19-0574  0.052
2020 Hashimoto K, Kaira K, Kawasaki T, Yamaguchi O, Kagamu H. Psuedoprogression mimicking hyperprogressive disease after pembrolizumab treatment in a patient with lung cancer. Lung Cancer (Amsterdam, Netherlands). 139: 221-223. PMID 31806361 DOI: 10.1016/j.lungcan.2019.11.019  0.05
2021 Hirai N, Maeda Y, Hashimoto K, Andriana BB, Matsuyoshi H, Sato H. EXPRESS: Coherent Anti-Stokes Raman Scattering Spectroscopy Using a Double-Wavelength-Emission Electronically Tuned Ti:Sapphire Laser. Applied Spectroscopy. 37028211020313. PMID 34041958 DOI: 10.1177/00037028211020313  0.047
2020 Pawlak M, Kedzierska KZ, Migdal M, Nahia KA, Ramilowski JA, Bugajski L, Hashimoto K, Marconi A, Piwocka K, Carninci P, Winata CL. Corrigendum: Dynamics of cardiomyocyte transcriptome and chromatin landscape demarcates key events of heart development Genome Research. 30: 153_2-153_2. DOI: 10.1101/Gr.260273.119  0.043
2022 Hashimoto K, Kaira K, Yamaguchi O, Shiono A, Mouri A, Miura Y, Kobayashi K, Imai H, Matsusaka Y, Kuji I, Kagamu H. Visual Assessment of 18F-FDG Uptake on PET to Predict Survival Benefit to PD-1 Blockade in Non-Small Cell Lung Cancer. Clinical Nuclear Medicine. 47: 108-116. PMID 35006104 DOI: 10.1097/RLU.0000000000004009  0.042
2015 Hashimoto K, Kudoh SN, Sato H. Analysis of the developing neural system using an in vitro model by Raman spectroscopy. The Analyst. 140: 2344-9. PMID 25610999 DOI: 10.1039/c4an01961j  0.037
2018 Hashimoto K, Andriana BB, Matsuyoshi H, Sato H. Discrimination analysis of excitatory and inhibitory neurons using Raman spectroscopy. The Analyst. PMID 29796444 DOI: 10.1039/c8an00051d  0.036
2012 Mouri H, Hori A, Kawashima Y, Hashimoto K. Large-scale length that determines the mean rate of energy dissipation in turbulence. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 026309. PMID 23005856  0.035
2020 Hashimoto K, Kaira K, Yamaguchi O, Mouri A, Shiono A, Miura Y, Murayama Y, Kobayashi K, Kagamu H, Kuji I. Potential of FDG-PET as Prognostic Significance after anti-PD-1 Antibody against Patients with Previously Treated Non-Small Cell Lung Cancer. Journal of Clinical Medicine. 9. PMID 32156047 DOI: 10.3390/jcm9030725  0.034
2022 Yamaguchi O, Kaira K, Naruse I, Umeda Y, Honda T, Watanabe S, Ichikawa K, Tateishi K, Kasahara N, Higuchi T, Hashimoto K, Shinomiya S, Miura Y, Shiono A, Mouri A, et al. Prospective assessment using F-FDG PET/CT as a novel predictor for early response to PD-1 blockade in non-small-cell lung cancer. Scientific Reports. 12: 11832. PMID 35821395 DOI: 10.1038/s41598-022-15964-3  0.033
2021 Ikemoto K, Hashimoto K, Harada Y, Kumamoto Y, Hayakawa M, Mochizuki K, Matsuo K, Yashiro K, Yaku H, Takamatsu T, Tanaka H. Raman Spectroscopic Assessment of Myocardial Viability in Langendorff-Perfused Ischemic Rat Hearts. Acta Histochemica Et Cytochemica. 54: 65-72. PMID 34012178 DOI: JST.JSTAGE/ahc/21-00016  0.031
2022 Zakaria R, Andriana BB, Watanabe T, Maryani A, Paramitha PN, Kuntana YP, Kusaka Y, Noothalapati H, Iwasaki K, Oshima N, Hashimoto K, Matsuyoshi H, Ishihara S, Yamamoto T, Sato H. Development of in-situ Raman diagnosis technique of eosinophil esophagitis. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 285: 121804. PMID 36122467 DOI: 10.1016/j.saa.2022.121804  0.031
2021 Naganuma K, Imai H, Yamaguchi O, Hashimoto K, Akagami T, Shinomiya S, Miura Y, Shiono A, Mouri A, Kaira K, Kobayashi K, Minato K, Kagamu H. Efficacy and Safety of Anti-Programed Death-1 Blockade in Previously Treated Large-Cell Neuroendocrine Carcinoma. Chemotherapy. 1-7. PMID 33827084 DOI: 10.1159/000514841  0.03
2021 Imai H, Kaira K, Hashimoto K, Nitanda H, Taguchi R, Yanagihara A, Umesaki T, Yamaguchi O, Mouri A, Kawasaki T, Yasuda M, Kobayashi K, Sakaguchi H, Kuji I, Kagamu H. Tumor immunity is related to F-FDG uptake in thymic epithelial tumor. Cancer Medicine. PMID 34363337 DOI: 10.1002/cam4.4176  0.03
2008 Hashimoto K, Morita A, Kuwahara S. Enantioselective synthesis of a mealybug pheromone with an irregular monoterpenoid skeleton. The Journal of Organic Chemistry. 73: 6913-5. PMID 18680345 DOI: 10.1021/jo801147c  0.023
2022 Seki M, Hashimoto K, Kondo N, Ohya Y, Kotajima F, Mitsutake K. Sequential Treatment by Antiviral Drugs Followed by Immunosuppressive Agents for COVID-19 Patients with Hematological Malignancy. Infection and Drug Resistance. 15: 7117-7124. PMID 36506836 DOI: 10.2147/IDR.S393198  0.021
2019 Hashimoto K, Kaira K, Kobayashi K, Murayama Y, Kagamu H. Spontaneous aspiration of a long tree twig as foreign body. Respirology Case Reports. 7: e00401. PMID 30766681 DOI: 10.1002/rcr2.401  0.019
2017 Pawlak M, Kedzierska K, Bugajski L, Hashimoto K, Ramilowski J, Marconi A, Carninci P, Piwocka K, Winata C. Genomics dissection of the zebrafish heart Mechanisms of Development. 145: S143. DOI: 10.1016/J.Mod.2017.04.402  0.019
2022 Shiono A, Imai H, Satou T, Taguchi R, Takahashi N, Azuma R, Yamaguchi O, Hashimoto K, Naito E, Iemura H, Miura Y, Mouri A, Kaira K, Kobayashi K, Kagamu H. Metachronous lesions in the orbit, retroperitoneum, and pleura of mucosa-associated lymphoid tissue lymphoma: A case report. Cancer Reports (Hoboken, N.J.). e1689. PMID 35899993 DOI: 10.1002/cnr2.1689  0.018
2021 Yamaguchi O, Kaira K, Hashimoto K, Kagamu H. Detection of pseudoprogression with [F]-FDG-PET in a patient with pulmonary large cell neuroendocrine carcinoma who received anti-PD-1 treatment. European Journal of Nuclear Medicine and Molecular Imaging. 48: 1268-1270. PMID 33094431 DOI: 10.1007/s00259-020-05069-2  0.012
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