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Prahatha Venkatraman, B.Tech, MS, PhD - Publications

Affiliations: 
2012-2018 Biological Sciences Purdue University, West Lafayette, IN, United States 
 2018-2021 Pharmacology University of Michigan, Ann Arbor, Ann Arbor, MI 
 2021- Neurosurgery University of California San Francisco and Gladstone Institutes 
Area:
Zebrafish, Epilepsy, Mechanobiology, Retinal degeneration
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10/58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Venkatraman P, Mills-Henry I, Padmanabhan KR, Pascuzzi P, Hassan M, Zhang J, Zhang X, Ma P, Pang CP, Dowling JE, Zhang M, Leung YF. Rods Contribute to Visual Behavior in Larval Zebrafish. Investigative Ophthalmology & Visual Science. 61: 11. PMID 33049059 DOI: 10.1167/iovs.61.12.11  0.651
2020 Bobo J, Garg A, Venkatraman P, Puthenveedu M, LeDuc PR. 3D In Vitro Neuron on a Chip for Probing Calcium Mechanostimulation. Advanced Biosystems. e2000080. PMID 32875741 DOI: 10.1002/adbi.202000080  0.579
2019 Xie R, Zhang M, Venkatraman P, Zhang X, Zhang G, Carmer R, Kantola SA, Pang CP, Ma P, Zhang M, Zhong W, Leung YF. Normalization of large-scale behavioural data collected from zebrafish. Plos One. 14: e0212234. PMID 30768618 DOI: 10.1371/Journal.Pone.0212234  0.609
2017 Liu Y, Ma P, Cassidy PA, Carmer R, Zhang G, Venkatraman P, Brown SA, Pang CP, Zhong W, Zhang M, Leung YF. Statistical Analysis of Zebrafish Locomotor Behaviour by Generalized Linear Mixed Models. Scientific Reports. 7: 2937. PMID 28592855 DOI: 10.1038/S41598-017-02822-W  0.567
2017 Ganzen L, Venkatraman P, Pang CP, Leung YF, Zhang M. Utilizing Zebrafish Visual Behaviors in Drug Screening for Retinal Degeneration. International Journal of Molecular Sciences. 18. PMID 28574477 DOI: 10.3390/Ijms18061185  0.57
2016 Zhang L, Xiang L, Liu Y, Venkatraman P, Chong L, Cho J, Bonilla S, Jin ZB, Pang CP, Ko KM, Ma P, Zhang M, Leung YF. Correction: A Naturally-Derived Compound Schisandrin B Enhanced Light Sensation in the pde6c Zebrafish Model of Retinal Degeneration. Plos One. 11: e0154552. PMID 27111849 DOI: 10.1371/journal.pone.0154552  0.632
2016 Zhang L, Xiang L, Liu Y, Venkatraman P, Chong L, Cho J, Bonilla S, Jin ZB, Pang CP, Ko KM, Ma P, Zhang M, Leung YF. A Naturally-Derived Compound Schisandrin B Enhanced Light Sensation in the pde6c Zebrafish Model of Retinal Degeneration. Plos One. 11: e0149663. PMID 26930483 DOI: 10.1371/Journal.Pone.0149663  0.705
2016 Gao Y, Zhang G, Jelfs B, Carmer R, Venkatraman P, Ghadami M, Brown SA, Pang CP, Leung YF, Chan RHM, Zhang M. Computational classification of different wild-type zebrafish strains based on their variation in light-induced locomotor response Computers in Biology and Medicine. 69: 1-9. DOI: 10.1016/j.compbiomed.2015.11.012  0.539
2015 Gao Y, Zhang G, Jelfs B, Carmer R, Venkatraman P, Ghadami M, Brown SA, Pang CP, Leung YF, Chan RH, Zhang M. Computational classification of different wild-type zebrafish strains based on their variation in light-induced locomotor response. Computers in Biology and Medicine. 69: 1-9. PMID 26688204 DOI: 10.1016/J.Compbiomed.2015.11.012  0.628
2015 Liu Y, Carmer R, Zhang G, Venkatraman P, Brown SA, Pang CP, Zhang M, Ma P, Leung YF. Statistical Analysis of Zebrafish Locomotor Response. Plos One. 10: e0139521. PMID 26437184 DOI: 10.1371/Journal.Pone.0139521  0.601
Low-probability matches (unlikely to be authored by this person)
2014 Munnamalai V, Weaver CJ, Weisheit CE, Venkatraman P, Agim ZS, Quinn MT, Suter DM. Bidirectional interactions between NOX2-type NADPH oxidase and the F-actin cytoskeleton in neuronal growth cones. Journal of Neurochemistry. 130: 526-40. PMID 24702317 DOI: 10.1111/Jnc.12734  0.237
2012 Sykes AM, Palstra N, Abankwa D, Hill JM, Skeldal S, Matusica D, Venkatraman P, Hancock JF, Coulson EJ. The effects of transmembrane sequence and dimerization on cleavage of the p75 neurotrophin receptor by γ-secretase. The Journal of Biological Chemistry. 287: 43810-24. PMID 23105112 DOI: 10.1074/Jbc.M112.382903  0.201
2009 Sonne K, Patel D, Mohanty P, Armaganijan L, Riedlbauchova L, El-Ali M, Di Biase L, Venkatraman P, Shaheen M, Kozeluhova M, Schweikert R, Burkhardt JD, Canby R, Wazni O, Saliba W, et al. Pulmonary vein antrum isolation, atrioventricular junction ablation, and antiarrhythmic drugs combined with direct current cardioversion: survival rates at 7 years follow-up. Journal of Interventional Cardiac Electrophysiology : An International Journal of Arrhythmias and Pacing. 26: 121-6. PMID 19789970 DOI: 10.1007/s10840-009-9436-1  0.131
2009 Telles E, Hosing AS, Kundu ST, Venkatraman P, Dalal SN. A novel pocket in 14-3-3epsilon is required to mediate specific complex formation with cdc25C and to inhibit cell cycle progression upon activation of checkpoint pathways. Experimental Cell Research. 315: 1448-57. PMID 19331823 DOI: 10.1016/j.yexcr.2009.01.018  0.109
2009 Venkatraman P, Balakrishnan S, Rao S, Hooda Y, Pol S. A sequence and structure based method to predict putative substrates, functions and regulatory networks of endo proteases. Plos One. 4: e5700. PMID 19492082 DOI: 10.1371/journal.pone.0005700  0.102
2014 Ramteke MP, Shelke P, Ramamoorthy V, Somavarapu AK, Gautam AK, Nanaware PP, Karanam S, Mukhopadhyay S, Venkatraman P. Identification of a novel ATPase activity in 14-3-3 proteins--evidence from enzyme kinetics, structure guided modeling and mutagenesis studies. Febs Letters. 588: 71-8. PMID 24269678 DOI: 10.1016/j.febslet.2013.11.008  0.09
2012 Singh Gautam AK, Balakrishnan S, Venkatraman P. Direct ubiquitin independent recognition and degradation of a folded protein by the eukaryotic proteasomes-origin of intrinsic degradation signals. Plos One. 7: e34864. PMID 22506054 DOI: 10.1371/journal.pone.0034864  0.089
2007 Bhutani N, Venkatraman P, Goldberg AL. Puromycin-sensitive aminopeptidase is the major peptidase responsible for digesting polyglutamine sequences released by proteasomes during protein degradation. The Embo Journal. 26: 1385-96. PMID 17318184 DOI: 10.1038/sj.emboj.7601592  0.085
2015 Sangith N, Srinivasaraghavan K, Sahu I, Desai A, Medipally S, Somavarappu AK, Verma C, Venkatraman P. Corrigendum to "Discovery of novel interacting partners of PSMD9, a proteasomal chaperone: Role of an Atypical and versatile PDZ-domain motif interaction and identification of putative functional modules" [FEBS Open Bio 4 (2014) 571-583]. Febs Open Bio. 5: 731-2. PMID 26448906 DOI: 10.1016/J.Fob.2015.06.010  0.085
2014 Somavarapu AK, Balakrishnan S, Gautam AK, Palmer DS, Venkatraman P. Structural interrogation of phosphoproteome identified by mass spectrometry reveals allowed and disallowed regions of phosphoconformation. Bmc Structural Biology. 14: 9. PMID 24618394 DOI: 10.1186/1472-6807-14-9  0.073
1998 Luttrell GH, Venkatraman P, Yoon RH. Removal of hazardous air pollutant precursors by advanced coal preparation Coal Preparation. 19: 243-255. DOI: 10.1080/07349349808945584  0.073
2014 Sangith N, Srinivasaraghavan K, Sahu I, Desai A, Medipally S, Somavarappu AK, Verma C, Venkatraman P. Discovery of novel interacting partners of PSMD9, a proteasomal chaperone: Role of an Atypical and versatile PDZ-domain motif interaction and identification of putative functional modules. Febs Open Bio. 4: 571-83. PMID 25009770 DOI: 10.1016/J.Fob.2014.05.005  0.072
2014 Nanaware PP, Ramteke MP, Somavarapu AK, Venkatraman P. Discovery of multiple interacting partners of gankyrin, a proteasomal chaperone and an oncoprotein--evidence for a common hot spot site at the interface and its functional relevance. Proteins. 82: 1283-300. PMID 24338975 DOI: 10.1002/prot.24494  0.067
2012 Bhutani N, Piccirillo R, Hourez R, Venkatraman P, Goldberg AL. Cathepsins L and Z are critical in degrading polyglutamine-containing proteins within lysosomes. The Journal of Biological Chemistry. 287: 17471-82. PMID 22451661 DOI: 10.1074/jbc.M112.352781  0.065
2007 Venkatraman P, Nguyen TT, Sainlos M, Bilsel O, Chitta S, Imperiali B, Stern LJ. Fluorogenic probes for monitoring peptide binding to class II MHC proteins in living cells. Nature Chemical Biology. 3: 222-8. PMID 17351628 DOI: 10.1038/Nchembio868  0.065
2015 Sangith N, Srinivasaraghavan K, Sahu I, Desai A, Medipally S, Somavarappu AK, Verma C, Venkatraman P. Corrigendum to "Discovery of novel interacting partners of PSMD9, a proteasomal chaperone: Role of an Atypical and versatile PDZ-domain motif interaction and identification of putative functional modules" [FEBS Open Bio 4 (2014) 571-583] Febs Open Bio. DOI: 10.1016/j.fob.2015.06.010  0.063
2010 Sethumadhavan G, Venkatraman P, Sundaresan B. RETRACTED ARTICLE: Leading the change of perception of software testing among university students Iccet 2010 - 2010 International Conference On Computer Engineering and Technology, Proceedings. 4: V4535-V4538. DOI: 10.1109/ICCET.2010.5485419  0.06
2014 Sahu I, Sangith N, Ramteke M, Gadre R, Venkatraman P. A novel role for the proteasomal chaperone PSMD9 and hnRNPA1 in enhancing IκBα degradation and NF-κB activation - functional relevance of predicted PDZ domain-motif interaction. The Febs Journal. 281: 2688-709. PMID 24720748 DOI: 10.1111/febs.12814  0.058
2004 Venkatraman P, Wetzel R, Tanaka M, Nukina N, Goldberg AL. Eukaryotic proteasomes cannot digest polyglutamine sequences and release them during degradation of polyglutamine-containing proteins. Molecular Cell. 14: 95-104. PMID 15068806 DOI: 10.1016/S1097-2765(04)00151-0  0.054
2012 Wadhawan V, Kolhe YA, Sangith N, Gautam AK, Venkatraman P. From prediction to experimental validation: desmoglein 2 is a functionally relevant substrate of matriptase in epithelial cells and their reciprocal relationship is important for cell adhesion. The Biochemical Journal. 447: 61-70. PMID 22783993 DOI: 10.1042/BJ20111432  0.051
2000 Hossain Z, Venkatraman P, Sundaram S. Modeling and characterization of HDTMOS power technology Ieee International Conference On Semiconductor Electronics, Proceedings, Icse. 54-56.  0.05
2006 Newby Z, Lee TT, Morse RJ, Liu Y, Liu L, Venkatraman P, Santi DV, Finer-Moore JS, Stroud RM. The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261. Biochemistry. 45: 7415-28. PMID 16768437 DOI: 10.1021/Bi060152S  0.05
2010 Venkatraman P. Specificity in the interaction of natural products with their target proteins--a biochemical and structural insight. Mini Reviews in Medicinal Chemistry. 10: 540-9. PMID 20370698 DOI: 10.2174/138955710791384090  0.043
2010 Venkatraman P, Hamdaoui B, Guizani M. Opportunistic bandwidth sharing through reinforcement learning Ieee Transactions On Vehicular Technology. 59: 3148-3153. DOI: 10.1109/Tvt.2010.2048766  0.035
1996 Venkatraman P, Jayant Baliga B. Large area MOS-gated power devices using high-current fusible links Ieee Transactions On Electron Devices. 43: 172-174. DOI: 10.1109/16.477611  0.028
1994 Syau T, Venkatraman P, Baliga BJ. Comparison of Ultralow Specific On-Resistance UMOSFET Structures: The ACCUFET, EXTFET, INVFET. and Conventional UMOSFET's Ieee Transactions On Electron Devices. 41: 800-808. DOI: 10.1109/16.285034  0.027
1995 Venkatraman P, Baliga BJ. Yield Loss Mechanisms in MOS-Gated Power Devices Ieee Transactions On Semiconductor Manufacturing. 8: 451-453. DOI: 10.1109/66.475189  0.026
1990 Skutt GR, Venkatraman PS. Analysis and measurement of high-frequency effects in high-current transformers Conference Procedings - Ieee Applied Power Electronics Conference and Exhibition - Apec. 354-364.  0.024
1992 Syau T, Venkatraman P, Baliga BJ. VIA-5 Comparison of Ultralow Specific On-Resistance UMOSFET Structures Ieee Transactions On Electron Devices. 39: 2672-2673. DOI: 10.1109/16.163545  0.023
2003 Vij R, DiPersio JF, Venkatraman P, Trinkaus K, Goodnough LT, Brown RA, Khoury HJ, Devine SM, Oza A, Shenoy S, Blum W, Adkins D. Donor CMV serostatus has no impact on CMV viremia or disease when prophylactic granulocyte transfusions are given following allogeneic peripheral blood stem cell transplantation. Blood. 101: 2067-9. PMID 12406871 DOI: 10.1182/blood-2002-07-2110  0.023
2011 Alsaleh O, Venkatraman P, Hamdaoui B, Fern A. Enabling opportunistic and dynamic spectrum access through learning techniques Wireless Communications and Mobile Computing. 11: 1497-1506. DOI: 10.1002/wcm.1221  0.019
1992 Baliga BJ, Syau T, Venkatraman P. The Accumulation-Mode Field-Effect Transistor: A New Ultralow On-Resistance MOSFET Ieee Electron Device Letters. 13: 427-429. DOI: 10.1109/55.192780  0.019
1996 Venkatraman P, Baliga BJ. Large area mos-gated power devices using fusible link technology Ieee Transactions On Electron Devices. 43: 347-351. DOI: 10.1109/16.481738  0.019
1992 Syau T, Venkatraman P, Baliga BJ. Extended trench-gate power UMOSFET structure with ultralow specific on-resistance Electronics Letters. 28: 865-867.  0.018
2009 Hamdaoui B, Venkatraman P, Guizani M. Opportunistic exploitation of bandwidth resources through reinforcement learning Globecom - Ieee Global Telecommunications Conference. DOI: 10.1109/GLOCOM.2009.5425693  0.018
2011 Venkatraman P, Hamdaoui B. Cooperative Q-learning for multiple secondary users in dynamic spectrum access Iwcmc 2011 - 7th International Wireless Communications and Mobile Computing Conference. 238-242. DOI: 10.1109/IWCMC.2011.5982539  0.018
1984 Venkatraman PS. WINDING EDDY CURRENT LOSSES IN SWITCH MODE POWER TRANSFORMERS DUE TO RECTANGULAR WAVE CURRENTS Proceedings of Powercon: International Solid-State Power Electronics Conference. A. 1. 1-A. 1. 11.  0.018
2012 Inostroza-Nieves Y, Venkatraman P, Zavala-Ruiz Z. Role of Sug1, a 19S proteasome ATPase, in the transcription of MHC I and the atypical MHC II molecules, HLA-DM and HLA-DO. Immunology Letters. 147: 67-74. PMID 22771340 DOI: 10.1016/j.imlet.2012.06.005  0.017
2009 Patel D, Shaheen M, Venkatraman P, Armaganijan L, Sanchez JE, Horton RP, Di Biase L, Mohanty P, Canby R, Bailey SM, Burkhardt JD, Gallinghouse GJ, Zagrodzky JD, Kozeluhova M, Natale A. Omega-3 polyunsaturated Fatty Acid supplementation reduced atrial fibrillation recurrence after pulmonary vein antrum isolation. Indian Pacing and Electrophysiology Journal. 9: 292-8. PMID 19898653  0.015
2015 Patankar S, Venkatraman P, Sridharan G, Kane S. Burkitt's lymphoma of maxillary gingiva: A case report. World Journal of Clinical Cases. 3: 1011-6. PMID 26677452 DOI: 10.12998/wjcc.v3.i12.1011  0.01
2014 Latha MS, Thirugnanasambandam RP, Balakrishnan N, Meghanathan HS, Moorthy A, Venkatraman P, Paramasivam V, Scott JX. The need of pediatric palliative care education among pediatric postgraduates in South India. Indian Journal of Pediatrics. 81: 455-9. PMID 24408397 DOI: 10.1007/s12098-013-1295-1  0.01
2014 Hossain Z, Burra B, Sellers J, Pratt B, Venkatraman P, Loechelt G, Salih A. Process & design impact on BVDSS stability of a shielded gate trench power MOSFET Proceedings of the International Symposium On Power Semiconductor Devices and Ics. 378-381. DOI: 10.1109/ISPSD.2014.6856055  0.01
2010 Patel D, Mohanty P, Di Biase L, Shaheen M, Lewis WR, Quan K, Cummings JE, Wang P, Al-Ahmad A, Venkatraman P, Nashawati E, Lakkireddy D, Schweikert R, Horton R, Sanchez J, et al. Safety and efficacy of pulmonary vein antral isolation in patients with obstructive sleep apnea: the impact of continuous positive airway pressure. Circulation. Arrhythmia and Electrophysiology. 3: 445-51. PMID 20689107 DOI: 10.1161/CIRCEP.109.858381  0.01
2005 Venkatraman PD, Anand SC, Dean C, Nettleton R, El Sawi A, Afify S. Pilot study investigating the feasibility of an ulcer-specific quality of life questionnaire Phlebology. 20: 14-27. DOI: 10.1258/0268355053300839  0.01
2005 Kohmuench JN, Mankosa MJ, Venkatraman P, Luttrell GH. Industrial applications of the CrossFlow separator 2005 Heavy Minerals Conference Proceedings. 2005: 189-195.  0.01
2002 Venkatraman P, Anand S, Dean C, Nettleton R. Clinical trials in wound care. II: Achieving statistical significance. Journal of Wound Care. 11: 156-60. PMID 11998597 DOI: 10.12968/jowc.2002.11.4.26387  0.01
2002 Venkatraman P, Anand S, Dean C, Nettleton R. Clinical trials in wound care I: the advantages and limitations of different clinical trial designs. Journal of Wound Care. 11: 91-4. PMID 11933731 DOI: 10.12968/jowc.2002.11.3.26380  0.01
1991 Sayani MP, Skutt GR, Venkatraman PS. Electrical and thermal performance of PWB transformers Conference Procedings - Ieee Applied Power Electronics Conference and Exhibition - Apec. 533-542.  0.01
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