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Cheng-Guo Duan - Publications

Affiliations: 
CAS Center for Excellence in Molecular Plant Sciences 
Area:
epigenetics, plant-pathogen interaction
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chen YY, Zhu C, Zhao JH, Liu T, Gao F, Zhang YC, Duan CG. DNA methylation-dependent epigenetic regulation of virulence in plants. Abiotech. 4: 185-201. PMID 37970467 DOI: 10.1007/s42994-023-00117-5  0.514
2023 Xie SS, Duan CG. Epigenetic regulation of plant immunity: from chromatin codes to plant disease resistance. Abiotech. 4: 124-139. PMID 37581024 DOI: 10.1007/s42994-023-00101-z  0.338
2023 Xie SS, Zhang YZ, Peng L, Yu DT, Zhu G, Zhao Q, Wang CH, Xie Q, Duan CG. JMJ28 guides sequence-specific targeting of ATX1/2-containing COMPASS-like complex in Arabidopsis. Cell Reports. 42: 112163. PMID 36827182 DOI: 10.1016/j.celrep.2023.112163  0.379
2022 Zhang J, Yuan J, Lin J, Chen L, You LY, Chen S, Peng L, Wang CH, Du J, Duan CG. Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants. Proceedings of the National Academy of Sciences of the United States of America. 120: e2208525120. PMID 36580600 DOI: 10.1073/pnas.2211155120  0.417
2022 Liu T, Xu LG, Duan CG. The trans-kingdom communication of noncoding RNAs in plant-environment interactions. The Plant Genome. e20289. PMID 36444889 DOI: 10.1002/tpg2.20289  0.301
2022 Chang YN, Wang Z, Ren Z, Wang CH, Wang P, Zhu JK, Li X, Duan CG. NUA and ESD4 negatively regulate ABA signaling by inhibiting SnRK2 kinase activity and stability in Arabidopsis. Journal of Integrative Plant Biology. PMID 35984097 DOI: 10.1111/jipb.13349  0.491
2021 Tang G, Yuan J, Wang J, Zhang YZ, Xie SS, Wang H, Tao Z, Liu H, Kistler HC, Zhao Y, Duan CG, Liu W, Ma Z, Chen Y. Fusarium BP1 is a reader of H3K27 methylation. Nucleic Acids Research. 49: 10448-10464. PMID 34570240 DOI: 10.1093/nar/gkab844  0.463
2021 You LY, Lin J, Xu HW, Chen CX, Chen JY, Zhang J, Zhang J, Li YX, Ye C, Zhang H, Jiang J, Zhu JK, Li QQ, Duan CG. Intragenic Heterochromatin-mediated Alternative Polyadenylation Modulates MiRNA and Pollen Development in Rice. The New Phytologist. PMID 34289124 DOI: 10.1111/nph.17635  0.484
2021 Niu Q, Song Z, Tang K, Chen L, Wang L, Ban T, Guo Z, Kim C, Zhang H, Duan CG, Zhang H, Zhu JK, Du J, Lang Z. A histone H3K4me1-specific binding protein is required for siRNA accumulation and DNA methylation at a subset of loci targeted by RNA-directed DNA methylation. Nature Communications. 12: 3367. PMID 34099688 DOI: 10.1038/s41467-021-23637-4  0.658
2021 Zhang YZ, Lin J, Ren Z, Chen CX, Miki D, Xie SS, Zhang J, Chang YN, Jiang J, Yan J, Li QQ, Zhu JK, Duan CG. Genome-wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis. Journal of Integrative Plant Biology. PMID 33438356 DOI: 10.1111/jipb.13068  0.595
2020 Zhang YZ, Yuan J, Zhang L, Chen C, Wang Y, Zhang G, Peng L, Xie SS, Jiang J, Zhu JK, Du J, Duan CG. Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis. Nature Communications. 11: 6212. PMID 33277495 DOI: 10.1038/s41467-020-20089-0  0.565
2020 Zeng W, Huang H, Lin X, Zhu C, Kosami KI, Huang C, Zhang H, Duan CG, Zhu JK, Miki D. Roles of DEMETER in regulating DNA methylation in vegetative tissues and pathogen resistance. Journal of Integrative Plant Biology. PMID 33236824 DOI: 10.1111/jipb.13037  0.749
2020 Zhang J, Zhang YZ, Jiang J, Duan CG. The Crosstalk Between Epigenetic Mechanisms and Alternative RNA Processing Regulation. Frontiers in Genetics. 11: 998. PMID 32973889 DOI: 10.3389/fgene.2020.00998  0.311
2019 Chang YN, Zhu C, Jiang J, Zhang H, Zhu JK, Duan CG. Epigenetic regulation in plant abiotic stress responses. Journal of Integrative Plant Biology. PMID 31872527 DOI: 10.1111/Jipb.12901  0.492
2019 Xu X, Wan W, Jiang G, Xi Y, Huang H, Cai J, Chang Y, Duan CG, Mangrauthia SK, Peng X, Zhu JK, Zhu G. Nucleocytoplasmic Trafficking of the Arabidopsis WD40 Repeat Protein XIW1 Regulates ABI5 Stability and Abscisic Acid Responses. Molecular Plant. PMID 31295628 DOI: 10.1016/J.Molp.2019.07.001  0.484
2019 Zhu G, Chang Y, Xu X, Tang K, Chen C, Lei M, Zhu JK, Duan CG. EXPORTIN 1A prevents transgene silencing in Arabidopsis by modulating nucleo-cytoplasmic partitioning of HDA6. Journal of Integrative Plant Biology. PMID 30697937 DOI: 10.1111/Jipb.12787  0.594
2018 Duan CG, Zhu JK, Cao X. Retrospective and perspective of plant epigenetics in China. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 30455036 DOI: 10.1016/J.Jgg.2018.09.004  0.636
2018 Yang DL, Zhang G, Wang L, Li J, Xu D, Di C, Tang K, Yang L, Zeng L, Miki D, Duan CG, Zhang H, Zhu JK. Four putative SWI2/SNF2 chromatin remodelers have dual roles in regulating DNA methylation in Arabidopsis. Cell Discovery. 4: 55. PMID 30345072 DOI: 10.1038/S41421-018-0056-8  0.659
2017 Duan CG, Wang X, Zhang L, Xiong X, Zhang Z, Tang K, Pan L, Hsu CC, Xu H, Tao WA, Zhang H, Zhu JK. A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. PMID 28808009 DOI: 10.1073/pnas.1710683114  0.669
2017 Tang K, Duan CG, Zhang H, Zhu JK. Computational Analysis of Genome-Wide ARGONAUTE-Dependent DNA Methylation in Plants. Methods in Molecular Biology (Clifton, N.J.). 1640: 219-225. PMID 28608346 DOI: 10.1007/978-1-4939-7165-7_16  0.537
2017 Duan CG, Zhu JK. Dissecting the Subnuclear Localization Patterns of Argonaute Proteins and Other Components of the RNA-Directed DNA Methylation Pathway in Plants. Methods in Molecular Biology (Clifton, N.J.). 1640: 129-135. PMID 28608338 DOI: 10.1007/978-1-4939-7165-7_8  0.629
2016 Duan CG, Wang X, Xie S, Pan L, Miki D, Tang K, Hsu CC, Lei M, Zhong Y, Hou YJ, Wang Z, Zhang Z, Mangrauthia SK, Xu H, Zhang H, et al. A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation. Cell Research. PMID 27934869 DOI: 10.1038/Cr.2016.147  0.766
2016 Zhao JH, Fang YY, Duan CG, Fang RX, Ding SW, Guo HS. Genome-wide identification of endogenous RNA-directed DNA methylation loci associated with abundant 21-nucleotide siRNAs in Arabidopsis. Scientific Reports. 6: 36247. PMID 27786269 DOI: 10.1038/Srep36247  0.479
2016 Yang Y, La H, Tang K, Miki D, Yang L, Wang B, Duan CG, Nie W, Wang X, Wang S, Pan Y, Tran EJ, An L, Zhang H, Zhu JK. SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis. Nucleic Acids Research. PMID 27672037 DOI: 10.1093/Nar/Gkw850  0.741
2016 Hou YJ, Zhu Y, Wang P, Zhao Y, Xie S, Batelli G, Wang B, Duan CG, Wang X, Xing L, Lei M, Yan J, Zhu X, Zhu JK. Type One Protein Phosphatase 1 and Its Regulatory Protein Inhibitor 2 Negatively Regulate ABA Signaling. Plos Genetics. 12: e1005835. PMID 26943172 DOI: 10.1371/Journal.Pgen.1005835  0.712
2015 Duan CG, Wang X, Tang K, Zhang H, Mangrauthia SK, Lei M, Hsu CC, Hou YJ, Wang C, Li Y, Tao WA, Zhu JK. MET18 Connects the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Active DNA Demethylation in Arabidopsis. Plos Genetics. 11: e1005559. PMID 26492035 DOI: 10.1371/Journal.Pgen.1005559  0.696
2015 Li Y, Duan CG, Zhu X, Qian W, Zhu JK. A DNA ligase required for active DNA demethylation and genomic imprinting in Arabidopsis. Cell Research. 25: 757-60. PMID 25906993 DOI: 10.1038/Cr.2015.45  0.72
2015 Lang Z, Lei M, Wang X, Tang K, Miki D, Zhang H, Mangrauthia SK, Liu W, Nie W, Ma G, Yan J, Duan CG, Hsu CC, Wang C, Tao WA, et al. The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing. Molecular Cell. 57: 971-83. PMID 25684209 DOI: 10.1016/J.Molcel.2015.01.009  0.772
2015 Wang B, Duan CG, Wang X, Hou YJ, Yan J, Gao C, Kim JH, Zhang H, Zhu JK. HOS1 regulates Argonaute1 by promoting transcription of the microRNA gene MIR168b in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 81: 861-70. PMID 25619693 DOI: 10.1111/Tpj.12772  0.644
2015 Duan CG, Zhang H, Tang K, Zhu X, Qian W, Hou YJ, Wang B, Lang Z, Zhao Y, Wang X, Wang P, Zhou J, Liang G, Liu N, Wang C, et al. Specific but interdependent functions for Arabidopsis AGO4 and AGO6 in RNA-directed DNA methylation. The Embo Journal. 34: 581-92. PMID 25527293 DOI: 10.15252/Embj.201489453  0.752
2014 Zhang H, Tang K, Wang B, Duan CG, Lang Z, Zhu JK. Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants. Plant Methods. 10: 18. PMID 24955108 DOI: 10.1186/1746-4811-10-18  0.597
2014 Zhao Y, Xing L, Wang X, Hou YJ, Gao J, Wang P, Duan CG, Zhu X, Zhu JK. The ABA receptor PYL8 promotes lateral root growth by enhancing MYB77-dependent transcription of auxin-responsive genes. Science Signaling. 7: ra53. PMID 24894996 DOI: 10.1126/Scisignal.2005051  0.6
2014 Zhang H, Tang K, Qian W, Duan CG, Wang B, Zhang H, Wang P, Zhu X, Lang Z, Yang Y, Zhu JK. An Rrp6-like protein positively regulates noncoding RNA levels and DNA methylation in Arabidopsis. Molecular Cell. 54: 418-30. PMID 24726328 DOI: 10.1016/J.Molcel.2014.03.019  0.711
2014 Lei M, La H, Lu K, Wang P, Miki D, Ren Z, Duan CG, Wang X, Tang K, Zeng L, Yang L, Zhang H, Nie W, Liu P, Zhou J, et al. Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns. Proceedings of the National Academy of Sciences of the United States of America. 111: 527-32. PMID 24248388 DOI: 10.1073/Pnas.1320106110  0.72
2013 Wang X, Duan CG, Tang K, Wang B, Zhang H, Lei M, Lu K, Mangrauthia SK, Wang P, Zhu G, Zhao Y, Zhu JK. RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1. Proceedings of the National Academy of Sciences of the United States of America. 110: 15467-72. PMID 24003136 DOI: 10.1073/Pnas.1315399110  0.73
2013 Zhang H, Wang B, Duan CG, Zhu JK. Chemical probes in plant epigenetics studies. Plant Signaling & Behavior. 8. PMID 23838953 DOI: 10.4161/Psb.25364  0.546
2012 Duan CG, Fang YY, Zhou BJ, Zhao JH, Hou WN, Zhu H, Ding SW, Guo HS. Suppression of Arabidopsis ARGONAUTE1-mediated slicing, transgene-induced RNA silencing, and DNA methylation by distinct domains of the Cucumber mosaic virus 2b protein. The Plant Cell. 24: 259-74. PMID 22247253 DOI: 10.1105/Tpc.111.092718  0.36
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