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Miguel Romero-Durana - Publications

Affiliations: 
2012-2018 Barcelona Supercomputing Center, Barcelona, Catalunya, Spain 
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11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Freiberger MI, Ruiz-Serra V, Pontes C, Romero-Durana M, Galaz-Davison P, Ramírez-Sarmiento CA, Schuster CD, Marti MA, Wolynes PG, Ferreiro DU, Parra RG, Valencia A. Local energetic frustration conservation in protein families and superfamilies. Nature Communications. 14: 8379. PMID 38104123 DOI: 10.1038/s41467-023-43801-2  0.362
2023 Lopez-Robles C, Scaramuzza S, Astorga-Simon EN, Ishida M, Williamson CD, Baños-Mateos S, Gil-Carton D, Romero-Durana M, Vidaurrazaga A, Fernandez-Recio J, Rojas AL, Bonifacino JS, Castaño-Díez D, Hierro A. Architecture of the ESCPE-1 membrane coat. Nature Structural & Molecular Biology. PMID 37322239 DOI: 10.1038/s41594-023-01014-7  0.553
2020 Romero-Durana M, Jiménez-García B, Fernández-Recio J. pyDockEneRes: per-residue decomposition of protein-protein docking energy. Bioinformatics (Oxford, England). 36: 2284-2285. PMID 31808797 DOI: 10.1093/bioinformatics/btz884  0.742
2019 Rosell M, Rodríguez-Lumbreras LA, Romero-Durana M, Jiménez-García B, Díaz L, Fernández-Recio J. Integrative modeling of protein-protein interactions with pyDock for the new docking challenges. Proteins. PMID 31746039 DOI: 10.1002/prot.25858  0.793
2019 Lensink MF, Brysbaert G, Nadzirin N, Velankar S, Chaleil RAG, Gerguri T, Bates PA, Laine E, Carbone A, Grudinin S, Kong R, Liu RR, Xu XM, Shi H, Chang S, ... ... Romero-Durana M, et al. Blind prediction of homo- and hetero- protein complexes: The CASP13-CAPRI experiment. Proteins. PMID 31612567 DOI: 10.1002/Prot.25838  0.618
2018 Jiménez-García B, Roel-Touris J, Romero-Durana M, Vidal M, Jiménez-González D, Fernández-Recio J. LightDock: a new multi-scale approach to protein-protein docking. Bioinformatics (Oxford, England). 34: 49-55. PMID 28968719 DOI: 10.1093/bioinformatics/btx555  0.731
2017 Romero-Durana M, Pallara C, Glaser F, Fernández-Recio J. Modeling Binding Affinity of Pathological Mutations for Computational Protein Design. Methods in Molecular Biology (Clifton, N.J.). 1529: 139-159. PMID 27914049 DOI: 10.1007/978-1-4939-6637-0_6  0.83
2016 Pérez-Cano L, Romero-Durana M, Fernández-Recio J. Structural and energy determinants in protein-RNA docking. Methods (San Diego, Calif.). 163-170. PMID 27816523 DOI: 10.1016/j.ymeth.2016.11.001  0.821
2016 Lensink MF, Velankar S, Kryshtafovych A, Huang SY, Schneidman-Duhovny D, Sali A, Segura J, Fernandez-Fuentes N, Viswanath S, Elber R, Grudinin S, Popov P, Neveu E, Lee H, Baek M, ... ... Romero-Durana M, et al. Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment. Proteins. PMID 27122118 DOI: 10.1002/Prot.25007  0.848
2013 Pallara C, Jiménez-García B, Pérez-Cano L, Romero-Durana M, Solernou A, Grosdidier S, Pons C, Moal IH, Fernandez-Recio J. Expanding the frontiers of protein-protein modeling: from docking and scoring to binding affinity predictions and other challenges. Proteins. 81: 2192-200. PMID 23934865 DOI: 10.1002/prot.24387  0.701
2013 Moretti R, Fleishman SJ, Agius R, Torchala M, Bates PA, Kastritis PL, Rodrigues JP, Trellet M, Bonvin AM, Cui M, Rooman M, Gillis D, Dehouck Y, Moal I, Romero-Durana M, et al. Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions. Proteins. 81: 1980-7. PMID 23843247 DOI: 10.1002/Prot.24356  0.765
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