Davi D. Bock - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 
Area:
Neural circuits, electron microscopy
Website:
http://davibock.net

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Schlegel P, Yin Y, Bates AS, Dorkenwald S, Eichler K, Brooks P, Han DS, Gkantia M, Dos Santos M, Munnelly EJ, Badalamente G, Serratosa Capdevila L, Sane VA, Fragniere AMC, Kiassat L, ... ... Bock DD, et al. Whole-brain annotation and multi-connectome cell typing of Drosophila. Nature. 634: 139-152. PMID 39358521 DOI: 10.1038/s41586-024-07686-5  0.593
2024 Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, ... ... Bock DD, et al. Neuronal wiring diagram of an adult brain. Nature. 634: 124-138. PMID 39358518 DOI: 10.1038/s41586-024-07558-y  0.663
2024 Ott CM, Torres R, Kuan TS, Kuan A, Buchanan J, Elabbady L, Seshamani S, Bodor AL, Collman F, Bock DD, Lee WC, da Costa NM, Lippincott-Schwartz J. Ultrastructural differences impact cilia shape and external exposure across cell classes in the visual cortex. Current Biology : Cb. PMID 38749425 DOI: 10.1016/j.cub.2024.04.043  0.435
2023 Ott CM, Torres R, Kuan TS, Kuan AT, Buchanan J, Elabbady L, Seshamani S, Bodor AL, Collman FC, Bock DD, Lee WA, Macarico da Costa N, Lippincott-Schwartz J. Nanometer-scale views of visual cortex reveal anatomical features of primary cilia poised to detect synaptic spillover. Biorxiv : the Preprint Server For Biology. PMID 37961618 DOI: 10.1101/2023.10.31.564838  0.696
2023 Zhao A, Nern A, Koskela S, Dreher M, Erginkaya M, Laughland CW, Ludwigh H, Thomson A, Hoeller J, Parekh R, Romani S, Bock DD, Chiappe E, Reiser MB. A comprehensive neuroanatomical survey of the Lobula Plate Tangential Neurons with predictions for their optic flow sensitivity. Biorxiv : the Preprint Server For Biology. PMID 37904921 DOI: 10.1101/2023.10.16.562634  0.383
2023 Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, ... ... Bock DD, et al. Neuronal wiring diagram of an adult brain. Biorxiv : the Preprint Server For Biology. PMID 37425937 DOI: 10.1101/2023.06.27.546656  0.664
2023 Schlegel P, Yin Y, Bates AS, Dorkenwald S, Eichler K, Brooks P, Han DS, Gkantia M, Dos Santos M, Munnelly EJ, Badalamente G, Capdevila LS, Sane VA, Pleijzier MW, Tamimi IFM, ... ... Bock DD, et al. A consensus cell type atlas from multiple connectomes reveals principles of circuit stereotypy and variation. Biorxiv : the Preprint Server For Biology. PMID 37425808 DOI: 10.1101/2023.06.27.546055  0.333
2022 Zheng Z, Li F, Fisher C, Ali IJ, Sharifi N, Calle-Schuler S, Hsu J, Masoodpanah N, Kmecova L, Kazimiers T, Perlman E, Nichols M, Li PH, Jain V, Bock DD. Structured sampling of olfactory input by the fly mushroom body. Current Biology : Cb. PMID 35797998 DOI: 10.1016/j.cub.2022.06.031  0.585
2022 Engert S, Sterne GR, Bock DD, Scott K. gustatory projections are segregated by taste modality and connectivity. Elife. 11. PMID 35611959 DOI: 10.7554/eLife.78110  0.423
2021 Buhmann J, Sheridan A, Malin-Mayor C, Schlegel P, Gerhard S, Kazimiers T, Krause R, Nguyen TM, Heinrich L, Lee WA, Wilson R, Saalfeld S, Jefferis GSXE, Bock DD, Turaga SC, et al. Automatic detection of synaptic partners in a whole-brain Drosophila electron microscopy data set. Nature Methods. PMID 34168373 DOI: 10.1038/s41592-021-01183-7  0.659
2020 Hampel S, Eichler K, Yamada D, Bock DD, Kamikouchi A, Seeds AM. Distinct subpopulations of mechanosensory chordotonal organ neurons elicit grooming of the fruit fly antennae. Elife. 9. PMID 33103999 DOI: 10.7554/eLife.59976  0.312
2020 Abbott LF, Bock DD, Callaway EM, Denk W, Dulac C, Fairhall AL, Fiete I, Harris KM, Helmstaedter M, Jain V, Kasthuri N, LeCun Y, Lichtman JW, Littlewood PB, Luo L, et al. The Mind of a Mouse. Cell. 182: 1372-1376. PMID 32946777 DOI: 10.1016/J.Cell.2020.08.010  0.686
2020 Turner-Evans DB, Jensen KT, Ali S, Paterson T, Sheridan A, Ray RP, Wolff T, Lauritzen JS, Rubin GM, Bock DD, Jayaraman V. The Neuroanatomical Ultrastructure and Function of a Biological Ring Attractor. Neuron. PMID 32916090 DOI: 10.1016/j.neuron.2020.08.006  0.43
2020 Coates KE, Calle-Schuler SA, Helmick LM, Knotts VL, Martik BN, Salman F, Warner LT, Valla SV, Bock DD, Dacks AM. The wiring logic of an identified serotonergic neuron that spans sensory networks. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 32641403 DOI: 10.1523/JNEUROSCI.0552-20.2020  0.553
2020 Bates AS, Schlegel P, Roberts RJV, Drummond N, Tamimi IFM, Turnbull R, Zhao X, Marin EC, Popovici PD, Dhawan S, Jamasb A, Javier A, Serratosa Capdevila L, Li F, Rubin GM, ... ... Bock DD, et al. Complete Connectomic Reconstruction of Olfactory Projection Neurons in the Fly Brain. Current Biology : Cb. PMID 32619485 DOI: 10.1016/J.Cub.2020.06.042  0.549
2020 Otto N, Pleijzier MW, Morgan IC, Edmondson-Stait AJ, Heinz KJ, Stark I, Dempsey G, Ito M, Kapoor I, Hsu J, Schlegel PM, Bates AS, Feng L, Costa M, Ito K, ... Bock DD, et al. Input Connectivity Reveals Additional Heterogeneity of Dopaminergic Reinforcement in Drosophila. Current Biology : Cb. PMID 32619479 DOI: 10.1016/j.cub.2020.05.077  0.453
2020 Marin EC, Büld L, Theiss M, Sarkissian T, Roberts RJV, Turnbull R, Tamimi IFM, Pleijzier MW, Laursen WJ, Drummond N, Schlegel P, Bates AS, Li F, Landgraf M, Costa M, ... Bock DD, et al. Connectomics Analysis Reveals First-, Second-, and Third-Order Thermosensory and Hygrosensory Neurons in the Adult Drosophila Brain. Current Biology : Cb. PMID 32619476 DOI: 10.1016/J.Cub.2020.06.028  0.545
2020 Wang F, Wang K, Forknall N, Patrick C, Yang T, Parekh R, Bock D, Dickson BJ. Neural circuitry linking mating and egg laying in Drosophila females. Nature. PMID 32103180 DOI: 10.1038/s41586-020-2055-9  0.393
2020 Kim H, Horigome M, Ishikawa Y, Li F, Lauritzen JS, Card G, Bock DD, Kamikouchi A. Wiring patterns from auditory sensory neurons to the escape and song-relay pathways in fruit flies. The Journal of Comparative Neurology. PMID 32012264 DOI: 10.1002/Cne.24877  0.49
2019 Sayin S, De Backer JF, Siju KP, Wosniack ME, Lewis LP, Frisch LM, Gansen B, Schlegel P, Edmondson-Stait A, Sharifi N, Fisher CB, Calle-Schuler SA, Lauritzen JS, Bock DD, Costa M, et al. A Neural Circuit Arbitrates between Persistence and Withdrawal in Hungry Drosophila. Neuron. PMID 31471123 DOI: 10.1016/J.Neuron.2019.07.028  0.398
2019 Zhang X, Coates K, Dacks AM, Günay C, Lauritzen JS, Li F, Calle-Schuler SA, Bock D, Gaudry Q. Local synaptic inputs support opposing, network-specific odor representations in a widely projecting modulatory neuron. Elife. 8. PMID 31264962 DOI: 10.7554/Elife.46839  0.465
2019 Dolan MJ, Frechter S, Bates AS, Dan C, Huoviala P, Roberts RJ, Schlegel P, Dhawan S, Tabano R, Dionne H, Christoforou C, Close K, Sutcliffe B, Giuliani B, Li F, ... ... Bock DD, et al. Neurogenetic dissection of the lateral horn reveals major outputs, diverse behavioural functions, and interactions with the mushroom body. Elife. 8. PMID 31112130 DOI: 10.7554/Elife.43079  0.383
2019 Frechter S, Bates AS, Tootoonian S, Dolan MJ, Manton JD, Jamasb AR, Kohl J, Bock D, Jefferis GS. Functional and anatomical specificity in a higher olfactory centre. Elife. 8. PMID 31112127 DOI: 10.7554/Elife.44590  0.434
2019 Ache JM, Polsky J, Alghailani S, Parekh R, Breads P, Peek MY, Bock DD, von Reyn CR, Card GM. Neural Basis for Looming Size and Velocity Encoding in the Drosophila Giant Fiber Escape Pathway. Current Biology : Cb. PMID 30827912 DOI: 10.1016/J.Cub.2019.01.079  0.503
2019 Zhang X, Coates K, Dacks A, Günay C, Lauritzen JS, Li F, Calle-Schuler SA, Bock D, Gaudry Q. Author response: Local synaptic inputs support opposing, network-specific odor representations in a widely projecting modulatory neuron Elife. DOI: 10.7554/Elife.46839.022  0.482
2018 Felsenberg J, Jacob PF, Walker T, Barnstedt O, Edmondson-Stait AJ, Pleijzier MW, Otto N, Schlegel P, Sharifi N, Perisse E, Smith CS, Lauritzen JS, Costa M, Jefferis GSXE, Bock DD, et al. Integration of Parallel Opposing Memories Underlies Memory Extinction. Cell. PMID 30245010 DOI: 10.1016/J.Cell.2018.08.021  0.347
2018 Dolan MJ, Belliart-Guérin G, Bates AS, Frechter S, Lampin-Saint-Amaux A, Aso Y, Roberts RJV, Schlegel P, Wong A, Hammad A, Bock D, Rubin GM, Preat T, Plaçais PY, Jefferis GSXE. Communication from Learned to Innate Olfactory Processing Centers Is Required for Memory Retrieval in Drosophila. Neuron. PMID 30244885 DOI: 10.1016/J.Neuron.2018.08.037  0.434
2018 Zheng Z, Lauritzen JS, Perlman E, Robinson CG, Nichols M, Milkie D, Torrens O, Price J, Fisher CB, Sharifi N, Calle-Schuler SA, Kmecova L, Ali IJ, Karsh B, Trautman ET, ... ... Bock DD, et al. A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster. Cell. PMID 30033368 DOI: 10.1016/J.Cell.2018.06.019  0.664
2016 Micheva KD, Wolman D, Mensh BD, Pax E, Buchanan J, Smith SJ, Bock DD. A large fraction of neocortical myelin ensheathes axons of local inhibitory neurons. Elife. 5. PMID 27383052 DOI: 10.7554/eLife.15784  0.308
2016 Micheva KD, Wolman D, Mensh BD, Pax E, Buchanan J, Smith SJ, Bock DD. Author response: A large fraction of neocortical myelin ensheathes axons of local inhibitory neurons Elife. DOI: 10.7554/Elife.15784.029  0.352
2016 Robinson C, Price J, Milkie D, Torrens O, Perlman E, Zheng Z, Fetter R, Bock D. Automated Infrastructure for High-Throughput Acquisition of Serial Section TEM Image Volumes Microscopy and Microanalysis. 22: 1150-1151. DOI: 10.1017/S1431927616006590  0.481
2014 Kreshuk A, Koethe U, Pax E, Bock DD, Hamprecht FA. Automated detection of synapses in serial section transmission electron microscopy image stacks. Plos One. 9: e87351. PMID 24516550 DOI: 10.1371/journal.pone.0087351  0.351
2013 Burns R, Roncal WG, Kleissas D, Lillaney K, Manavalan P, Perlman E, Berger DR, Bock DD, Chung K, Grosenick L, Kasthuri N, Weiler NC, Deisseroth K, Kazhdan M, Lichtman J, et al. The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience. Scientific and Statistical Database Management : International Conference, Ssdbm ... : Proceedings. International Conference On Scientific and Statistical Database Management. PMID 24401992 DOI: 10.1145/2484838.2484870  0.372
2012 Briggman KL, Bock DD. Volume electron microscopy for neuronal circuit reconstruction. Current Opinion in Neurobiology. 22: 154-61. PMID 22119321 DOI: 10.1016/j.conb.2011.10.022  0.465
2011 Kleinfeld D, Bharioke A, Blinder P, Bock DD, Briggman KL, Chklovskii DB, Denk W, Helmstaedter M, Kaufhold JP, Lee WC, Meyer HS, Micheva KD, Oberlaender M, Prohaska S, Reid RC, et al. Large-scale automated histology in the pursuit of connectomes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 16125-38. PMID 22072665 DOI: 10.1523/Jneurosci.4077-11.2011  0.597
2011 Akselrod-Ballin A, Bock D, Reid RC, Warfield SK. Accelerating image registration with the Johnson-Lindenstrauss lemma: application to imaging 3-D neural ultrastructure with electron microscopy. Ieee Transactions On Medical Imaging. 30: 1427-38. PMID 21402511 DOI: 10.1109/Tmi.2011.2125797  0.445
2011 Bock DD, Lee WC, Kerlin AM, Andermann ML, Hood G, Wetzel AW, Yurgenson S, Soucy ER, Kim HS, Reid RC. Network anatomy and in vivo physiology of visual cortical neurons. Nature. 471: 177-82. PMID 21390124 DOI: 10.1038/Nature09802  0.661
2009 Akselrod-Ballin A, Bock D, Reid RC, Warfield SK. Accelerating feature based registration using the Johnson-Lindenstrauss Lemma. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 12: 632-9. PMID 20426041 DOI: 10.1007/978-3-642-04268-3_78  0.317
2009 Akselrod-Ballin A, Bock D, Reid RC, Warfield SK. Improved registration for large electron microscopy images Proceedings - 2009 Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Isbi 2009. 434-437. DOI: 10.1109/ISBI.2009.5193077  0.356
2007 Dauguet J, Bock D, Reid RC, Warfield SK. Alignment of large image series using cubic B-splines tessellation: application to transmission electron microscopy data. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 10: 710-7. PMID 18044631  0.393
2007 Dauguet J, Bock D, Reid RC, Warfield SK. Alignment of large image series using cubic B-splines tessellation: Application to transmission electron microscopy data Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4792: 710-717.  0.352
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