| Year |
Citation |
Score |
| 2024 |
Brahmachari S, Tripathi S, Onuchic JN, Levine H. Nucleosomes play a dual role in regulating transcription dynamics. Proceedings of the National Academy of Sciences of the United States of America. 121: e2319772121. PMID 38968124 DOI: 10.1073/pnas.2319772121 |
0.412 |
|
| 2024 |
Levine H, Tu Y. Machine learning meets physics: A two-way street. Proceedings of the National Academy of Sciences of the United States of America. 121: e2403580121. PMID 38913898 DOI: 10.1073/pnas.2403580121 |
0.453 |
|
| 2024 |
Wang A, Lin X, Chau KN, Onuchic JN, Levine H, George JT. RACER-m leverages structural features for sparse T cell specificity prediction. Science Advances. 10: eadl0161. PMID 38748791 DOI: 10.1126/sciadv.adl0161 |
0.411 |
|
| 2023 |
Catalanotto M, Vaz JM, Abshire C, Youngblood R, Chu M, Levine H, Jolly MK, Dragoi AM. Dual role of CASP8AP2/FLASH in regulating epithelial-to-mesenchymal transition plasticity (EMP). Translational Oncology. 39: 101837. PMID 37984255 DOI: 10.1016/j.tranon.2023.101837 |
0.519 |
|
| 2023 |
Adler FR, Anderson ARA, Bhushan A, Bogdan P, Bravo-Cordero JJ, Brock A, Chen Y, Cukierman E, DelGiorno KE, Denis GV, Ferrall-Fairbanks MC, Gartner ZJ, Germain RN, Gordon DM, Hunter G, ... ... Levine H, et al. Modeling collective cell behavior in cancer: Perspectives from an interdisciplinary conversation. Cell Systems. 14: 252-257. PMID 37080161 DOI: 10.1016/j.cels.2023.03.002 |
0.491 |
|
| 2023 |
Jain P, Corbo S, Mohammad K, Sahoo S, Ranganathan S, George JT, Levine H, Taube J, Toneff M, Jolly MK. Epigenetic memory acquired during long-term EMT induction governs the recovery to the epithelial state. Journal of the Royal Society, Interface. 20: 20220627. PMID 36628532 DOI: 10.1098/rsif.2022.0627 |
0.481 |
|
| 2022 |
Galbraith M, Levine H, Onuchic JN, Jia D. Decoding the coupled decision-making of the epithelial-mesenchymal transition and metabolic reprogramming in cancer. Iscience. 26: 105719. PMID 36582834 DOI: 10.1016/j.isci.2022.105719 |
0.434 |
|
| 2022 |
Ng Chau K, George JT, Onuchic JN, Lin X, Levine H. Contact map dependence of a T-cell receptor binding repertoire. Physical Review. E. 106: 014406. PMID 35974642 DOI: 10.1103/PhysRevE.106.014406 |
0.418 |
|
| 2022 |
Jia W, Duddu AS, Jolly MK, Levine H. Lack of Correlation between Landscape Geometry and Transition Rates. The Journal of Physical Chemistry. B. 126: 5613-5618. PMID 35876849 DOI: 10.1021/acs.jpcb.2c02837 |
0.492 |
|
| 2022 |
Vilchez Mercedes SA, Bocci F, Ahmed M, Eder I, Zhu N, Levine H, Onuchic JN, Jolly MK, Wong PK. Nrf2 Modulates the Hybrid Epithelial/Mesenchymal Phenotype and Notch Signaling During Collective Cancer Migration. Frontiers in Molecular Biosciences. 9: 807324. PMID 35480877 DOI: 10.3389/fmolb.2022.807324 |
0.649 |
|
| 2022 |
Masuda H, Harano K, Miura S, Wang Y, Hirota Y, Harada O, Jolly MK, Matsunaga Y, Lim B, Wood AL, Parinyanitikul N, Jin Lee H, Gong G, George JT, Levine H, et al. Changes in Triple-Negative Breast Cancer Molecular Subtypes in Patients Without Pathologic Complete Response After Neoadjuvant Systemic Chemotherapy. Jco Precision Oncology. 6: e2000368. PMID 35294223 DOI: 10.1200/PO.20.00368 |
0.469 |
|
| 2022 |
Muralidharan S, Sahoo S, Saha A, Chandran S, Majumdar SS, Mandal S, Levine H, Jolly MK. Quantifying the Patterns of Metabolic Plasticity and Heterogeneity along the Epithelial-Hybrid-Mesenchymal Spectrum in Cancer. Biomolecules. 12. PMID 35204797 DOI: 10.3390/biom12020297 |
0.5 |
|
| 2022 |
Jia W, Jolly MK, Levine H. NRF2-dependent Epigenetic Regulation can Promote the Hybrid Epithelial/Mesenchymal Phenotype. Frontiers in Cell and Developmental Biology. 9: 828250. PMID 35118079 DOI: 10.3389/fcell.2021.828250 |
0.527 |
|
| 2021 |
Lin X, George JT, Schafer NP, Chau KN, Birnbaum ME, Clementi C, Onuchic JN, Levine H. Rapid Assessment of T-Cell Receptor Specificity of the Immune Repertoire. Nature Computational Science. 1: 362-373. PMID 36090450 DOI: 10.1038/s43588-021-00076-1 |
0.405 |
|
| 2021 |
Mandal S, Tejaswi T, Janivara R, Srikrishnan S, Thakur P, Sahoo S, Chakraborty P, Sohal SS, Levine H, George JT, Jolly MK. Transcriptomic-Based Quantification of the Epithelial-Hybrid-Mesenchymal Spectrum across Biological Contexts. Biomolecules. 12. PMID 35053177 DOI: 10.3390/biom12010029 |
0.505 |
|
| 2021 |
Nam A, Mohanty A, Bhattacharya S, Kotnala S, Achuthan S, Hari K, Srivastava S, Guo L, Nathan A, Chatterjee R, Jain M, Nasser MW, Batra SK, Rangarajan G, Massarelli E, ... Levine H, et al. Dynamic Phenotypic Switching and Group Behavior Help Non-Small Cell Lung Cancer Cells Evade Chemotherapy. Biomolecules. 12. PMID 35053156 DOI: 10.3390/biom12010008 |
0.511 |
|
| 2021 |
Sahoo S, Nayak SP, Hari K, Purkait P, Mandal S, Kishore A, Levine H, Jolly MK. Immunosuppressive Traits of the Hybrid Epithelial/Mesenchymal Phenotype. Frontiers in Immunology. 12: 797261. PMID 34975907 DOI: 10.3389/fimmu.2021.797261 |
0.509 |
|
| 2021 |
Tripathi S, Brahmachari S, Onuchic JN, Levine H. DNA supercoiling-mediated collective behavior of co-transcribing RNA polymerases. Nucleic Acids Research. PMID 34951454 DOI: 10.1093/nar/gkab1252 |
0.399 |
|
| 2021 |
Singh N, Bartol T, Levine H, Sejnowski T, Nadkarni S. Author Correction: Presynaptic endoplasmic reticulum regulates short-term plasticity in hippocampal synapses. Communications Biology. 4: 969. PMID 34376760 DOI: 10.1038/s42003-021-02519-x |
0.733 |
|
| 2021 |
Vilchez Mercedes SA, Bocci F, Levine H, Onuchic JN, Jolly MK, Wong PK. Decoding leader cells in collective cancer invasion. Nature Reviews. Cancer. PMID 34239104 DOI: 10.1038/s41568-021-00376-8 |
0.635 |
|
| 2021 |
Deshmukh AP, Vasaikar SV, Tomczak K, Tripathi S, den Hollander P, Arslan E, Chakraborty P, Soundararajan R, Jolly MK, Rai K, Levine H, Mani SA. Identification of EMT signaling cross-talk and gene regulatory networks by single-cell RNA sequencing. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33941680 DOI: 10.1073/pnas.2102050118 |
0.514 |
|
| 2021 |
Jia D, Park JH, Kaur H, Jung KH, Yang S, Tripathi S, Galbraith M, Deng Y, Jolly MK, Kaipparettu BA, Onuchic JN, Levine H. Towards decoding the coupled decision-making of metabolism and epithelial-to-mesenchymal transition in cancer. British Journal of Cancer. PMID 33859341 DOI: 10.1038/s41416-021-01385-y |
0.614 |
|
| 2021 |
Deng Y, Chakraborty P, Jolly MK, Levine H. A Theoretical Approach to Coupling the Epithelial-Mesenchymal Transition (EMT) to Extracellular Matrix (ECM) Stiffness via LOXL2. Cancers. 13. PMID 33807227 DOI: 10.3390/cancers13071609 |
0.526 |
|
| 2021 |
Singh N, Bartol T, Levine H, Sejnowski T, Nadkarni S. Presynaptic endoplasmic reticulum regulates short-term plasticity in hippocampal synapses. Communications Biology. 4: 241. PMID 33623091 DOI: 10.1038/s42003-021-01761-7 |
0.742 |
|
| 2021 |
Chakraborty P, George JT, Woodward WA, Levine H, Jolly MK. Gene expression profiles of inflammatory breast cancer reveal high heterogeneity across the epithelial-hybrid-mesenchymal spectrum. Translational Oncology. 14: 101026. PMID 33535154 DOI: 10.1016/j.tranon.2021.101026 |
0.473 |
|
| 2021 |
Tripathi S, Xing J, Levine H, Jolly MK. Mathematical Modeling of Plasticity and Heterogeneity in EMT. Methods in Molecular Biology (Clifton, N.J.). 2179: 385-413. PMID 32939734 DOI: 10.1007/978-1-0716-0779-4_28 |
0.545 |
|
| 2020 |
Tripathi SC, Jolly MK, Mani SA, Levine H. Editorial: Characterizing the Multi-Faceted Dynamics of Tumor Cell Plasticity. Frontiers in Molecular Biosciences. 7: 630276. PMID 33553244 DOI: 10.3389/fmolb.2020.630276 |
0.491 |
|
| 2020 |
Kohar V, Gordin D, Katebi A, Levine H, Onuchic JN, Lu M. Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits. Bioinformatics (Oxford, England). PMID 33279968 DOI: 10.1093/bioinformatics/btaa785 |
0.399 |
|
| 2020 |
Jia D, Paudel BB, Hayford CE, Hardeman KN, Levine H, Onuchic JN, Quaranta V. Drug-Tolerant Idling Melanoma Cells Exhibit Theory-Predicted Metabolic Low-Low Phenotype. Frontiers in Oncology. 10: 1426. PMID 32923395 DOI: 10.3389/Fonc.2020.01426 |
0.408 |
|
| 2020 |
Thankamony AP, Murali R, Karthikeyan N, Varghese BA, Teo WS, McFarland A, Roden DL, Holliday H, Konrad CV, Cazet A, Dodson E, Yang J, Baker LA, George JT, Levine H, et al. Targeting the Id1-Kif11 Axis in Triple-Negative Breast Cancer Using Combination Therapy. Biomolecules. 10. PMID 32911668 DOI: 10.3390/biom10091295 |
0.503 |
|
| 2020 |
Huang B, Lu M, Galbraith M, Levine H, Onuchic JN, Jia D. Decoding the mechanisms underlying cell-fate decision-making during stem cell differentiation by random circuit perturbation. Journal of the Royal Society, Interface. 17: 20200500. PMID 32781932 DOI: 10.1098/Rsif.2020.0500 |
0.434 |
|
| 2020 |
Jia W, Tripathi S, Chakraborty P, Chedere A, Rangarajan A, Levine H, Jolly MK. Epigenetic feedback and stochastic partitioning during cell division can drive resistance to EMT. Oncotarget. 11: 2611-2624. PMID 32676163 DOI: 10.18632/oncotarget.27651 |
0.526 |
|
| 2020 |
Chakraborty P, George JT, Tripathi S, Levine H, Jolly MK. Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum. Frontiers in Bioengineering and Biotechnology. 8: 220. PMID 32266244 DOI: 10.3389/fbioe.2020.00220 |
0.53 |
|
| 2020 |
Tripathi S, Chakraborty P, Levine H, Jolly MK. A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells. Plos Computational Biology. 16: e1007619. PMID 32040502 DOI: 10.1371/journal.pcbi.1007619 |
0.537 |
|
| 2020 |
Tripathi S, Levine H, Jolly MK. The Physics of Cellular Decision Making During Epithelial-Mesenchymal Transition. Annual Review of Biophysics. PMID 31913665 DOI: 10.1146/annurev-biophys-121219-081557 |
0.546 |
|
| 2019 |
Sarkar S, Sinha SK, Levine H, Jolly MK, Dutta PS. Anticipating critical transitions in epithelial-hybrid-mesenchymal cell-fate determination. Proceedings of the National Academy of Sciences of the United States of America. PMID 31843939 DOI: 10.1073/pnas.1913773116 |
0.533 |
|
| 2019 |
Lourenco AR, Ban Y, Crowley MJ, Lee SB, Ramchandani D, Du W, Elemento O, George JT, Jolly MK, Levine H, Sheng J, Wong STC, Altorki NK, Gao D. Differential contributions of pre- and post- EMT tumor cells in breast cancer metastasis. Cancer Research. PMID 31704888 DOI: 10.1158/0008-5472.Can-19-1427 |
0.526 |
|
| 2019 |
Kang TY, Bocci F, Jolly MK, Levine H, Onuchic JN, Levchenko A. Pericytes enable effective angiogenesis in the presence of proinflammatory signals. Proceedings of the National Academy of Sciences of the United States of America. PMID 31685607 DOI: 10.1073/Pnas.1913373116 |
0.603 |
|
| 2019 |
Thangavel H, Angelis C, Vasaikar S, Bhat R, Jolly MK, Nagi C, Creighton CJ, Chen F, Dobrolecki LE, George JT, Kumar T, Abdulkareem NM, Mao S, Nardone A, Rimawi M, ... ... Levine H, et al. A CTC-Cluster-Specific Signature Derived from OMICS Analysis of Patient-Derived Xenograft Tumors Predicts Outcomes in Basal-Like Breast Cancer. Journal of Clinical Medicine. 8. PMID 31652963 DOI: 10.3390/Jcm8111772 |
0.497 |
|
| 2019 |
Yang Y, Jolly MK, Levine H. Computational Modeling of Collective Cell Migration: Mechanical and Biochemical Aspects. Advances in Experimental Medicine and Biology. 1146: 1-11. PMID 31612450 DOI: 10.1007/978-3-030-17593-1_1 |
0.535 |
|
| 2019 |
Jia W, Deshmukh A, Mani SA, Jolly MK, Levine H. A possible role for epigenetic feedback regulation in the dynamics of the Epithelial-Mesenchymal Transition (EMT). Physical Biology. PMID 31342918 DOI: 10.1088/1478-3975/Ab34Df |
0.521 |
|
| 2019 |
Bocci F, Tripathi SC, Vilchez Mercedes SA, George JT, Casabar JP, Wong PK, Hanash SM, Levine H, Onuchic JN, Jolly MK. NRF2 activates a partial epithelial-mesenchymal transition and is maximally present in a hybrid epithelial/mesenchymal phenotype. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 31329868 DOI: 10.1093/Intbio/Zyz021 |
0.704 |
|
| 2019 |
Jia D, Li X, Bocci F, Tripathi S, Deng Y, Jolly MK, Onuchic JN, Levine H. Quantifying Cancer Epithelial-Mesenchymal Plasticity and its Association with Stemness and Immune Response. Journal of Clinical Medicine. 8. PMID 31121840 DOI: 10.3390/Jcm8050725 |
0.64 |
|
| 2019 |
Jolly MK, Ware KE, Xu S, Gilja S, Shetler S, Yang Y, Wang X, Austin RG, Runyambo D, Hish AJ, Bartholf DeWitt S, George JT, Kreulen RT, Boss MK, Lazarides AL, ... ... Levine H, et al. E-cadherin represses anchorage-independent growth in sarcomas through both signaling and mechanical mechanisms. Molecular Cancer Research : McR. PMID 30862685 DOI: 10.1158/1541-7786.Mcr-18-0763 |
0.51 |
|
| 2019 |
Lin X, Kulkarni P, Bocci F, Schafer NP, Roy S, Tsai MY, He Y, Chen Y, Rajagopalan K, Mooney SM, Zeng Y, Weninger K, Grishaev A, Onuchic JN, Levine H, et al. Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems Level. Biomolecules. 9. PMID 30813315 DOI: 10.3390/biom9020077 |
0.607 |
|
| 2019 |
Jia D, Lu M, Jung KH, Park JH, Yu L, Onuchic JN, Kaipparettu BA, Levine H. Elucidating cancer metabolic plasticity by coupling gene regulation with metabolic pathways. Proceedings of the National Academy of Sciences of the United States of America. PMID 30733294 DOI: 10.1073/Pnas.1816391116 |
0.425 |
|
| 2019 |
Shinde A, Hardy SD, Kim D, Akhand SS, Jolly MK, Wang WH, Anderson JC, Khodadadi RB, Brown WS, George JT, Liu S, Wan J, Levine H, Willey CD, Krusemark CJ, et al. Spleen tyrosine kinase-mediated autophagy is required for epithelial-mesenchymal plasticity and metastasis in breast cancer. Cancer Research. PMID 30733195 DOI: 10.1158/0008-5472.Can-18-2636 |
0.516 |
|
| 2019 |
Li X, Jolly MK, George JT, Pienta KJ, Levine H. Computational Modeling of the Crosstalk Between Macrophage Polarization and Tumor Cell Plasticity in the Tumor Microenvironment. Frontiers in Oncology. 9: 10. PMID 30729096 DOI: 10.3389/fonc.2019.00010 |
0.53 |
|
| 2019 |
Bocci F, Jolly MK, Levine H, Onuchic JN. Quantitative Characteristic of ncRNA Regulation in Gene Regulatory Networks. Methods in Molecular Biology (Clifton, N.J.). 1912: 341-366. PMID 30635901 DOI: 10.1007/978-1-4939-8982-9_14 |
0.598 |
|
| 2019 |
Bocci F, Gearhart-Serna L, Boareto M, Ribeiro M, Ben-Jacob E, Devi GR, Levine H, Onuchic JN, Jolly MK. Toward understanding cancer stem cell heterogeneity in the tumor microenvironment. Proceedings of the National Academy of Sciences of the United States of America. 116: 148-157. PMID 30587589 DOI: 10.1073/Pnas.1815345116 |
0.706 |
|
| 2019 |
Jia D, Lu M, Jung KH, Park JH, Onuchic JN, Kaipparettu BA, Levine H. Abstract 2448: Elucidating the metabolic plasticity of cancer by coupling gene regulation with metabolic pathways Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-2448 |
0.458 |
|
| 2018 |
Jolly MK, Preca BT, Tripathi SC, Jia D, George JT, Hanash SM, Brabletz T, Stemmler MP, Maurer J, Levine H. Interconnected feedback loops among ESRP1, HAS2, and CD44 regulate epithelial-mesenchymal plasticity in cancer. Apl Bioengineering. 2: 031908. PMID 31069317 DOI: 10.1063/1.5024874 |
0.655 |
|
| 2018 |
Jia D, George J, Tripathi S, Kundnani D, Lu M, Hanash S, Onuchic J, Jolly MK, Levine H. Testing the gene expression classification of the EMT spectrum. Physical Biology. PMID 30557866 DOI: 10.1088/1478-3975/Aaf8D4 |
0.69 |
|
| 2018 |
Jolly MK, Somarelli JA, Sheth M, Biddle A, Tripathi SC, Armstrong AJ, Hanash SM, Bapat SA, Rangarajan A, Levine H. Hybrid epithelial/mesenchymal phenotypes promote metastasis and therapy resistance across carcinomas. Pharmacology & Therapeutics. PMID 30268772 DOI: 10.1016/J.Pharmthera.2018.09.007 |
0.643 |
|
| 2018 |
Cheng RR, Haglund E, Tiee NS, Morcos F, Levine H, Adams JA, Jennings PA, Onuchic JN. Designing bacterial signaling interactions with coevolutionary landscapes. Plos One. 13: e0201734. PMID 30125296 DOI: 10.1371/Journal.Pone.0201734 |
0.404 |
|
| 2018 |
Bocci F, Jolly MK, George JT, Levine H, Onuchic JN. A mechanism-based computational model to capture the interconnections among epithelial-mesenchymal transition, cancer stem cells and Notch-Jagged signaling. Oncotarget. 9: 29906-29920. PMID 30042822 DOI: 10.18632/Oncotarget.25692 |
0.646 |
|
| 2018 |
Tripathi S, Jolly MK, Woodward WA, Levine H, Deem MW. Analysis of Hierarchical Organization in Gene Expression Networks Reveals Underlying Principles of Collective Tumor Cell Dissemination and Metastatic Aggressiveness of Inflammatory Breast Cancer. Frontiers in Oncology. 8: 244. PMID 30023340 DOI: 10.3389/Fonc.2018.00244 |
0.499 |
|
| 2018 |
Jolly MK, Mani SA, Levine H. Hybrid epithelial/mesenchymal phenotype(s): The 'fittest' for metastasis? Biochimica Et Biophysica Acta. PMID 29997040 DOI: 10.1016/J.Bbcan.2018.07.001 |
0.525 |
|
| 2018 |
Huang B, Jia D, Feng J, Levine H, Onuchic JN, Lu M. RACIPE: a computational tool for modeling gene regulatory circuits using randomization. Bmc Systems Biology. 12: 74. PMID 29914482 DOI: 10.1186/S12918-018-0594-6 |
0.395 |
|
| 2018 |
Lin X, Roy S, Jolly MK, Bocci F, Schafer NP, Tsai MY, Chen Y, He Y, Grishaev A, Weninger K, Orban J, Kulkarni P, Rangarajan G, Levine H, Onuchic JN. PAGE4 and Conformational Switching: Insights from Molecular Dynamics Simulations and Implications for Prostate Cancer. Journal of Molecular Biology. PMID 29758263 DOI: 10.1016/J.Jmb.2018.05.011 |
0.608 |
|
| 2018 |
Jolly MK, Kulkarni P, Weninger K, Orban J, Levine H. Phenotypic Plasticity, Bet-Hedging, and Androgen Independence in Prostate Cancer: Role of Non-Genetic Heterogeneity. Frontiers in Oncology. 8: 50. PMID 29560343 DOI: 10.3389/Fonc.2018.00050 |
0.49 |
|
| 2018 |
Evans MK, Brown MC, Geradts J, Bao X, Robinson TJ, Jolly MK, Vermeulen P, Palmer GM, Gromeier M, Levine H, Morse MA, Van Laere S, Devi GR. XIAP regulation by MNK links MAPK and NFκB signaling to determine an aggressive breast cancer phenotype. Cancer Research. PMID 29351901 DOI: 10.1158/0008-5472.Can-17-1667 |
0.511 |
|
| 2018 |
Teomy E, Kessler DA, Levine H. Confluent and nonconfluent phases in a model of cell tissue Physical Review E. 98. DOI: 10.1103/Physreve.98.042418 |
0.331 |
|
| 2017 |
Jia D, Jolly MK, Tripathi SC, Den Hollander P, Huang B, Lu M, Celiktas M, Ramirez-Peña E, Ben-Jacob E, Onuchic JN, Hanash SM, Mani SA, Levine H. Distinguishing mechanisms underlying EMT tristability. Cancer Convergence. 1: 2. PMID 29623961 DOI: 10.1186/s41236-017-0005-8 |
0.742 |
|
| 2017 |
Ghosh P, Levine H. Morphodynamics of a growing microbial colony driven by cell death. Physical Review. E. 96: 052404. PMID 29347664 DOI: 10.1103/PhysRevE.96.052404 |
0.71 |
|
| 2017 |
Bocci F, Jolly MK, Tripathi SC, Aguilar M, Hanash SM, Levine H, Onuchic JN. Numb prevents a complete epithelial-mesenchymal transition by modulating Notch signalling. Journal of the Royal Society, Interface. 14. PMID 29187638 DOI: 10.1098/Rsif.2017.0512 |
0.718 |
|
| 2017 |
Sun L, Noel JK, Levine H, Onuchic JN. Molecular Simulations Suggest a Force-Dependent Mechanism of Vinculin Activation. Biophysical Journal. 113: 1697-1710. PMID 29045864 DOI: 10.1016/J.Bpj.2017.08.037 |
0.421 |
|
| 2017 |
George JT, Jolly MK, Xu J, Somarelli J, Levine H. Survival outcomes in cancer patients predicted by a partial EMT gene expression scoring metric. Cancer Research. PMID 28947416 DOI: 10.1158/0008-5472.Can-16-3521 |
0.536 |
|
| 2017 |
Jolly MK, Boareto M, Debeb BG, Aceto N, Farach-Carson MC, Woodward WA, Levine H. Inflammatory breast cancer: a model for investigating cluster-based dissemination. Npj Breast Cancer. 3: 21. PMID 28649661 DOI: 10.1038/s41523-017-0023-9 |
0.504 |
|
| 2017 |
Jolly MK, Ward C, Eapen MS, Myers S, Hallgren O, Levine H, Sohal SS. Epithelial mesenchymal transition (EMT), a spectrum of states: role in lung development, homeostasis and disease. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 28646553 DOI: 10.1002/Dvdy.24541 |
0.461 |
|
| 2017 |
Tripathi SC, Fahrmann JF, Celiktas M, Aguilar M, Marini KD, Jolly MK, Katayama H, Wang H, Murage EN, Dennison JB, Watkins DN, Levine H, Ostrin EJ, Taguchi A, Hanash SM. MCAM mediates chemoresistance in small cell lung cancer via the PI3K/AKT/SOX2 signaling pathway. Cancer Research. PMID 28646020 DOI: 10.1158/0008-5472.CAN-16-2874 |
0.633 |
|
| 2017 |
Jia D, Jolly MK, Kulkarni P, Levine H. Phenotypic Plasticity and Cell Fate Decisions in Cancer: Insights from Dynamical Systems Theory. Cancers. 9. PMID 28640191 DOI: 10.3390/cancers9070070 |
0.54 |
|
| 2017 |
Jolly MK, Tripathi SC, Somarelli JA, Hanash SM, Levine H. Epithelial-mesenchymal plasticity: How have quantitative mathematical models helped improve our understanding? Molecular Oncology. PMID 28548388 DOI: 10.1002/1878-0261.12084 |
0.653 |
|
| 2017 |
Jolly MK, Ware KE, Gilja S, Somarelli JA, Levine H. EMT and MET: necessary or permissive for metastasis? Molecular Oncology. PMID 28548345 DOI: 10.1002/1878-0261.12083 |
0.513 |
|
| 2017 |
Ware KE, Gilja S, Xu S, Shetler S, Jolly MK, Wang X, Bartholf Dewitt S, Hish AJ, Jordan S, Eward W, Levine H, Armstrong AJ, Somarelli JA. Induction of Mesenchymal-Epithelial Transitions in Sarcoma Cells. Journal of Visualized Experiments : Jove. PMID 28448023 DOI: 10.3791/55520 |
0.516 |
|
| 2017 |
Jia D, Jolly MK, Harrison W, Boareto M, Ben-Jacob E, Levine H. Operating principles of tristable circuits regulating cellular differentiation. Physical Biology. PMID 28443829 DOI: 10.1088/1478-3975/Aa6F90 |
0.602 |
|
| 2017 |
Huang B, Lu M, Jia D, Ben-Jacob E, Levine H, Onuchic JN. Interrogating the topological robustness of gene regulatory circuits by randomization. Plos Computational Biology. 13: e1005456. PMID 28362798 DOI: 10.1371/Journal.Pcbi.1005456 |
0.587 |
|
| 2017 |
Kulkarni P, Jolly MK, Jia D, Mooney SM, Bhargava A, Kagohara LT, Chen Y, Hao P, He Y, Veltri RW, Grishaev A, Weninger K, Levine H, Orban J. Phosphorylation-induced conformational dynamics in an intrinsically disordered protein and potential role in phenotypic heterogeneity. Proceedings of the National Academy of Sciences of the United States of America. PMID 28289210 DOI: 10.1073/Pnas.1700082114 |
0.492 |
|
| 2017 |
Mooney SM, Talebian V, Jolly MK, Jia D, Gromala M, Levine H, McConkey BJ. The GRHL2/ZEB Feedback Loop - A Key Axis in the Regulation of EMT in Breast Cancer. Journal of Cellular Biochemistry. PMID 28266048 DOI: 10.1002/Jcb.25974 |
0.514 |
|
| 2017 |
Yu L, Lu M, Jia D, Ma J, Ben-Jacob E, Levine H, Kaipparettu BA, Onuchic JN. Modeling the Genetic Regulation of Cancer Metabolism: Interplay Between Glycolysis and Oxidative Phosphorylation. Cancer Research. PMID 28202516 DOI: 10.1158/0008-5472.Can-16-2074 |
0.584 |
|
| 2017 |
Jolly MK, Jia D, Tripathi SC, Mooney S, Celiktas M, Hanash SM, Mani SA, Pienta KJ, Ben-Jacob E, Levine H. Abstract 3053: Stability and stemness of the hybrid epithelial-mesenchymal phenotype Cancer Research. 77: 3053-3053. DOI: 10.1158/1538-7445.Am2017-3053 |
0.473 |
|
| 2016 |
Mooney SM, Jolly MK, Levine H, Kulkarni P. Phenotypic plasticity in prostate cancer: role of intrinsically disordered proteins. Asian Journal of Andrology. PMID 27427552 DOI: 10.4103/1008-682X.183570 |
0.518 |
|
| 2016 |
Somarelli JA, Shelter S, Jolly MK, Wang X, Bartholf Dewitt S, Hish AJ, Gilja S, Eward WC, Ware KE, Levine H, Armstrong AJ, Garcia-Blanco MA. Mesenchymal-epithelial transition in sarcomas is controlled by the combinatorial expression of miR-200s and GRHL2. Molecular and Cellular Biology. PMID 27402864 DOI: 10.1128/Mcb.00373-16 |
0.502 |
|
| 2016 |
Boareto M, Jolly MK, Goldman A, Pietilä M, Mani SA, Sengupta S, Ben-Jacob E, Levine H, Onuchic JN. Notch-Jagged signalling can give rise to clusters of cells exhibiting a hybrid epithelial/mesenchymal phenotype. Journal of the Royal Society, Interface / the Royal Society. 13. PMID 27170649 DOI: 10.1098/Rsif.2015.1106 |
0.704 |
|
| 2016 |
Grigore AD, Jolly MK, Jia D, Farach-Carson MC, Levine H. Tumor Budding: The Name is EMT. Partial EMT. Journal of Clinical Medicine. 5. PMID 27136592 DOI: 10.3390/Jcm5050051 |
0.486 |
|
| 2016 |
Jolly MK, Tripathi SC, Jia D, Mooney SM, Celiktas M, Hanash SM, Mani SA, Pienta KJ, Ben-Jacob E, Levine H. Stability of the hybrid epithelial/mesenchymal phenotype. Oncotarget. PMID 27008704 DOI: 10.18632/Oncotarget.8166 |
0.71 |
|
| 2016 |
Tripathi SC, Peters HL, Taguchi A, Katayama H, Wang H, Momin A, Jolly MK, Celiktas M, Rodriguez-Canales J, Liu H, Behrens C, Wistuba II, Ben-Jacob E, Levine H, Molldrem JJ, et al. Immunoproteasome deficiency is a feature of non-small cell lung cancer with a mesenchymal phenotype and is associated with a poor outcome. Proceedings of the National Academy of Sciences of the United States of America. PMID 26929325 DOI: 10.1073/Pnas.1521812113 |
0.687 |
|
| 2016 |
Schwarcz D, Levine H, Ben-Jacob E, Ariel G. Uniform modeling of bacterial colony patterns with varying nutrient and substrate Physica D: Nonlinear Phenomena. 318: 91-99. DOI: 10.1016/J.Physd.2015.11.002 |
0.444 |
|
| 2015 |
Hecht I, Natan S, Zaritsky A, Levine H, Tsarfaty I, Ben-Jacob E. The motility-proliferation-metabolism interplay during metastatic invasion. Scientific Reports. 5: 13538. PMID 26337223 DOI: 10.1038/Srep13538 |
0.47 |
|
| 2015 |
Jolly MK, Jia D, Boareto M, Mani SA, Pienta KJ, Ben-Jacob E, Levine H. Coupling the modules of EMT and stemness: A tunable 'stemness window' model. Oncotarget. PMID 26317796 DOI: 10.18632/Oncotarget.4629 |
0.615 |
|
| 2015 |
Jolly MK, Boareto M, Huang B, Jia D, Lu M, Ben-Jacob E, Onuchic JN, Levine H. Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis. Frontiers in Oncology. 5: 155. PMID 26258068 DOI: 10.3389/Fonc.2015.00155 |
0.701 |
|
| 2015 |
Jia D, Jolly MK, Boareto M, Parsana P, Mooney SM, Pienta KJ, Levine H, Ben-Jacob E. OVOL guides the epithelial-hybrid-mesenchymal transition. Oncotarget. PMID 25944618 DOI: 10.18632/Oncotarget.3623 |
0.646 |
|
| 2015 |
Ghosh P, Mondal J, Ben-Jacob E, Levine H. Mechanically-driven phase separation in a growing bacterial colony. Proceedings of the National Academy of Sciences of the United States of America. 112: E2166-73. PMID 25870260 DOI: 10.1073/Pnas.1504948112 |
0.754 |
|
| 2015 |
Jolly MK, Boareto M, Huang B, Jia D, Lu M, Onuchic JN, Levine H, Ben-Jacob E. Implications of the hybrid epithelial/mesenchymal phenotype in metastasis Frontiers in Oncology. 5. DOI: 10.3389/fonc.2015.00155 |
0.562 |
|
| 2014 |
Sun L, Noel JK, Sulkowska JI, Levine H, Onuchic JN. Connecting thermal and mechanical protein (un)folding landscapes. Biophysical Journal. 107: 2950-61. PMID 25517160 DOI: 10.1016/J.Bpj.2014.10.021 |
0.396 |
|
| 2014 |
Jolly MK, Huang B, Lu M, Mani SA, Levine H, Ben-Jacob E. Towards elucidating the connection between epithelial-mesenchymal transitions and stemness. Journal of the Royal Society, Interface / the Royal Society. 11: 20140962. PMID 25339690 DOI: 10.1098/Rsif.2014.0962 |
0.618 |
|
| 2014 |
Camley BA, Zhang Y, Zhao Y, Li B, Ben-Jacob E, Levine H, Rappel WJ. Polarity mechanisms such as contact inhibition of locomotion regulate persistent rotational motion of mammalian cells on micropatterns. Proceedings of the National Academy of Sciences of the United States of America. 111: 14770-5. PMID 25258412 DOI: 10.1073/Pnas.1414498111 |
0.469 |
|
| 2014 |
Zimmermann J, Hayes RL, Basan M, Onuchic JN, Rappel WJ, Levine H. Intercellular stress reconstitution from traction force data. Biophysical Journal. 107: 548-54. PMID 25099794 DOI: 10.1016/J.Bpj.2014.06.036 |
0.412 |
|
| 2014 |
Cheng RR, Morcos F, Levine H, Onuchic JN. Toward rationally redesigning bacterial two-component signaling systems using coevolutionary information. Proceedings of the National Academy of Sciences of the United States of America. 111: E563-71. PMID 24449878 DOI: 10.1073/Pnas.1323734111 |
0.483 |
|
| 2014 |
Feng J, Kessler DA, Ben-Jacob E, Levine H. Growth feedback as a basis for persister bistability. Proceedings of the National Academy of Sciences of the United States of America. 111: 544-9. PMID 24344277 DOI: 10.1073/Pnas.1320396110 |
0.474 |
|
| 2014 |
Zimmermann J, Basan M, Hayes R, Rappel W, Ben-Jacob E, Levine H. Calculating Intercellular Stress in a Model of Collectively Moving Cells Biophysical Journal. 106: 173a. DOI: 10.1016/J.Bpj.2013.11.982 |
0.452 |
|
| 2013 |
Ghosh P, Ben-Jacob E, Levine H. Modeling cell-death patterning during biofilm formation. Physical Biology. 10: 066006. PMID 24275528 DOI: 10.1088/1478-3975/10/6/066006 |
0.753 |
|
| 2013 |
Lu M, Jolly MK, Levine H, Onuchic JN, Ben-Jacob E. MicroRNA-based regulation of epithelial-hybrid-mesenchymal fate determination. Proceedings of the National Academy of Sciences of the United States of America. 110: 18144-9. PMID 24154725 DOI: 10.1073/Pnas.1318192110 |
0.688 |
|
| 2013 |
Yang S, Ravikumar KM, Levine H. Energy evaluation of β-strand packing in a fibril-forming SH3 domain. The Journal of Physical Chemistry. B. 117: 13051-7. PMID 23819485 DOI: 10.1021/Jp402442P |
0.612 |
|
| 2013 |
Basan M, Elgeti J, Hannezo E, Rappel WJ, Levine H. Alignment of cellular motility forces with tissue flow as a mechanism for efficient wound healing. Proceedings of the National Academy of Sciences of the United States of America. 110: 2452-9. PMID 23345440 DOI: 10.1073/Pnas.1219937110 |
0.3 |
|
| 2012 |
Hu B, Kessler DA, Rappel WJ, Levine H. How input fluctuations reshape the dynamics of a biological switching system. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 061910. PMID 23367979 DOI: 10.1103/Physreve.86.061910 |
0.321 |
|
| 2012 |
Nadkarni S, Bartol TM, Stevens CF, Sejnowski TJ, Levine H. Short-term plasticity constrains spatial organization of a hippocampal presynaptic terminal. Proceedings of the National Academy of Sciences of the United States of America. 109: 14657-62. PMID 22908295 DOI: 10.1073/Pnas.1211971109 |
0.713 |
|
| 2012 |
Ben-Jacob E, Coffey DS, Levine H. Bacterial survival strategies suggest rethinking cancer cooperativity. Trends in Microbiology. 20: 403-10. PMID 22750098 DOI: 10.1016/J.Tim.2012.06.001 |
0.438 |
|
| 2012 |
Shao D, Levine H, Rappel WJ. Coupling actin flow, adhesion, and morphology in a computational cell motility model. Proceedings of the National Academy of Sciences of the United States of America. 109: 6851-6. PMID 22493219 DOI: 10.1073/Pnas.1203252109 |
0.783 |
|
| 2012 |
Takeda K, Shao D, Adler M, Charest PG, Loomis WF, Levine H, Groisman A, Rappel WJ, Firtel RA. Incoherent feedforward control governs adaptation of activated ras in a eukaryotic chemotaxis pathway. Science Signaling. 5: ra2. PMID 22215733 DOI: 10.1126/Scisignal.2002413 |
0.768 |
|
| 2012 |
Hu B, Kessler DA, Rappel W, Levine H. Effects of Input Fluctuations on the Statistical Dynamics of a Biochemical Switch Biophysical Journal. 102: 160a. DOI: 10.1016/J.Bpj.2011.11.869 |
0.388 |
|
| 2012 |
Nadkarni S, Sejnowski T, Bartol T, Stevens C, Levine H, Harris K, Ennedy E. Effects of Presynaptic Calcium Stores on Short-Term Synaptic Plasticity Biophysical Journal. 102: 670a. DOI: 10.1016/J.Bpj.2011.11.3650 |
0.694 |
|
| 2011 |
Hu B, Kessler DA, Rappel WJ, Levine H. Effects of input noise on a simple biochemical switch. Physical Review Letters. 107: 148101. PMID 22107236 DOI: 10.1103/Physrevlett.107.148101 |
0.38 |
|
| 2011 |
Hecht I, Levine H, Rappel WJ, Ben-Jacob E. "Self-assisted" amoeboid navigation in complex environments. Plos One. 6: e21955. PMID 21829602 DOI: 10.1371/Journal.Pone.0021955 |
0.512 |
|
| 2011 |
Hecht I, Skoge ML, Charest PG, Ben-Jacob E, Firtel RA, Loomis WF, Levine H, Rappel WJ. Activated membrane patches guide chemotactic cell motility. Plos Computational Biology. 7: e1002044. PMID 21738453 DOI: 10.1371/Journal.Pcbi.1002044 |
0.532 |
|
| 2011 |
Hu B, Chen W, Levine H, Rappel WJ. Quantifying information transmission in eukaryotic gradient sensing and chemotactic response. Journal of Statistical Physics. 142: 1167-1186. PMID 21643513 DOI: 10.1007/S10955-011-0156-4 |
0.4 |
|
| 2011 |
Hu B, Chen W, Rappel WJ, Levine H. How geometry and internal bias affect the accuracy of eukaryotic gradient sensing. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 021917. PMID 21405873 DOI: 10.1103/Physreve.83.021917 |
0.419 |
|
| 2011 |
Hu B, Levine H, Rappel WJ. Design principles and specificity in biological networks with cross activation. Physical Biology. 8: 026001. PMID 21263168 DOI: 10.1088/1478-3975/8/2/026001 |
0.401 |
|
| 2011 |
Pittà MD, Volman V, Levine H, Pioggia G, Rossi DD, Ben-Jacob E. Characterization of the complexity of glia dynamics to synaptic activity: Coexistence of amplitude and frequency modulations of intracellular calcium dynamics – A novel bifurcation-based principle for information encoding F1000research. 2. DOI: 10.7490/F1000Research.1744.1 |
0.724 |
|
| 2011 |
Hu B, Chen W, Rappel W, Levine H. Explore the Physical Limits of Eukaryotic Gradient Sensing in a Statistical Mechanical Approach Biophysical Journal. 100: 110a. DOI: 10.1016/J.Bpj.2010.12.808 |
0.406 |
|
| 2011 |
Levine H. Measurement Noise Limitations in Eukaryotic Chemotaxis Biophysical Journal. 100: 7a. DOI: 10.1016/J.Bpj.2010.12.252 |
0.301 |
|
| 2010 |
Nadkarni S, Bartol TM, Sejnowski TJ, Levine H. Modelling vesicular release at hippocampal synapses. Plos Computational Biology. 6: e1000983. PMID 21085682 DOI: 10.1371/Journal.Pcbi.1000983 |
0.724 |
|
| 2010 |
Volman V, Levine H, Sejnowski TJ. Shunting inhibition controls the gain modulation mediated by asynchronous neurotransmitter release in early development. Plos Computational Biology. 6: e1000973. PMID 21079676 DOI: 10.1371/Journal.Pcbi.1000973 |
0.712 |
|
| 2010 |
Hu B, Chen W, Rappel WJ, Levine H. Physical limits on cellular sensing of spatial gradients. Physical Review Letters. 105: 048104. PMID 20867888 DOI: 10.1103/Physrevlett.105.048104 |
0.396 |
|
| 2010 |
Shao D, Rappel WJ, Levine H. Computational model for cell morphodynamics. Physical Review Letters. 105: 108104. PMID 20867552 DOI: 10.1103/Physrevlett.105.108104 |
0.782 |
|
| 2010 |
Wylie CS, Trout AD, Kessler DA, Levine H. Optimal strategy for competence differentiation in bacteria. Plos Genetics. 6: e1001108. PMID 20838595 DOI: 10.1371/Journal.Pgen.1001108 |
0.667 |
|
| 2010 |
Buenemann M, Levine H, Rappel WJ, Sander LM. The role of cell contraction and adhesion in dictyostelium motility. Biophysical Journal. 99: 50-8. PMID 20655832 DOI: 10.1016/J.Bpj.2010.03.057 |
0.339 |
|
| 2010 |
Modchang C, Nadkarni S, Bartol TM, Triampo W, Sejnowski TJ, Levine H, Rappel WJ. A comparison of deterministic and stochastic simulations of neuronal vesicle release models. Physical Biology. 7: 026008. PMID 20505227 DOI: 10.1088/1478-3975/7/2/026008 |
0.724 |
|
| 2010 |
Fuller D, Chen W, Adler M, Groisman A, Levine H, Rappel WJ, Loomis WF. External and internal constraints on eukaryotic chemotaxis. Proceedings of the National Academy of Sciences of the United States of America. 107: 9656-9. PMID 20457897 DOI: 10.1073/Pnas.0911178107 |
0.308 |
|
| 2010 |
Hu B, Fuller D, Loomis WF, Levine H, Rappel WJ. Phenomenological approach to eukaryotic chemotactic efficiency. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 031906. PMID 20365769 DOI: 10.1103/Physreve.81.031906 |
0.388 |
|
| 2009 |
Volman V, Levine H. Signal processing in local neuronal circuits based on activity-dependent noise and competition. Chaos (Woodbury, N.Y.). 19: 033107. PMID 19791987 DOI: 10.1063/1.3184806 |
0.675 |
|
| 2009 |
Volman V, Levine H, Ben-Jacob E, Sejnowski TJ. Locally balanced dendritic integration by short-term synaptic plasticity and active dendritic conductances. Journal of Neurophysiology. 102: 3234-50. PMID 19759328 DOI: 10.1152/Jn.00260.2009 |
0.759 |
|
| 2009 |
Hu B, Rappel WJ, Levine H. Mechanisms and constraints on yeast MAPK signaling specificity. Biophysical Journal. 96: 4755-63. PMID 19527636 DOI: 10.1016/J.Bpj.2009.02.065 |
0.414 |
|
| 2009 |
Wylie CS, Ghim CM, Kessler D, Levine H. The fixation probability of rare mutators in finite asexual populations. Genetics. 181: 1595-612. PMID 19153261 DOI: 10.1534/genetics.108.094532 |
0.605 |
|
| 2009 |
De Pittà M, Volman V, Levine H, Ben-Jacob E. Multimodal encoding in a simplified model of intracellular calcium signaling. Cognitive Processing. 10: S55-70. PMID 19030904 DOI: 10.1007/S10339-008-0242-Y |
0.737 |
|
| 2009 |
De Pittà M, Volman V, Levine H, Ben-Jacob E. Multimodal encoding in a simplified model of intracellular calcium signaling (Cognitive Processing DOI: 10.1007/s10339-008-0242-y) Cognitive Processing. 10: 127. DOI: 10.1007/s10339-008-0254-7 |
0.406 |
|
| 2008 |
Rappel WJ, Levine H. Receptor noise limitations on chemotactic sensing. Proceedings of the National Academy of Sciences of the United States of America. 105: 19270-5. PMID 19064934 DOI: 10.1073/Pnas.0804702105 |
0.319 |
|
| 2008 |
Volman V, Levine H. Activity-dependent stochastic resonance in recurrent neuronal networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 060903. PMID 18643209 DOI: 10.1103/Physreve.77.060903 |
0.674 |
|
| 2008 |
De Pittà M, Volman V, Levine H, Pioggia G, De Rossi D, Ben-Jacob E. Coexistence of amplitude and frequency modulations in intracellular calcium dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 030903. PMID 18517322 DOI: 10.1103/Physreve.77.030903 |
0.726 |
|
| 2008 |
Nadkarni S, Jung P, Levine H. Astrocytes optimize the synaptic transmission of information. Plos Computational Biology. 4: e1000088. PMID 18516277 DOI: 10.1371/Journal.Pcbi.1000088 |
0.634 |
|
| 2008 |
Nadkarni S, Jung P, Levine H. Correction: Astrocytes Optimize the Synaptic Transmission of Information Plos Computational Biology. 4. DOI: 10.1371/Annotation/Ec07378D-Fd1B-45B8-Bfed-1A20C9Fd5D26 |
0.505 |
|
| 2008 |
Volman V, Levine H, Sejnowski TJ. Active dendritic conductances enhance processing of plastic synaptic stimuli Bmc Neuroscience. 9. DOI: 10.1186/1471-2202-9-S1-P44 |
0.71 |
|
| 2008 |
De Pittà M, Volman V, Levine H, Pioggia G, De Rossi D, Ben-Jacob E. Erratum: Coexistence of amplitude and frequency modulations in intracellular calcium dynamics [Phys. Rev. E77, 030903(R) (2008)] Physical Review E. 78. DOI: 10.1103/Physreve.78.019902 |
0.711 |
|
| 2007 |
Hecht I, Ben-Jacob E, Levine H. Correlated phenotypic transitions to competence in bacterial colonies. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 040901. PMID 17994927 DOI: 10.1103/Physreve.76.040901 |
0.476 |
|
| 2007 |
Yang S, Onuchic JN, GarcÃa AE, Levine H. Folding time predictions from all-atom replica exchange simulations. Journal of Molecular Biology. 372: 756-63. PMID 17681536 DOI: 10.1016/J.Jmb.2007.07.010 |
0.703 |
|
| 2007 |
Volman V, Ben-Jacob E, Levine H. The astrocyte as a gatekeeper of synaptic information transfer. Neural Computation. 19: 303-26. PMID 17206866 DOI: 10.1162/Neco.2007.19.2.303 |
0.718 |
|
| 2006 |
Yang S, Onuchic JN, Levine H. Effective stochastic dynamics on a protein folding energy landscape. The Journal of Chemical Physics. 125: 054910. PMID 16942260 DOI: 10.1063/1.2229206 |
0.715 |
|
| 2006 |
Wylie CS, Levine H, Kessler DA. Fluctuation-induced instabilities in front propagation up a comoving reaction gradient in two dimensions. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 016119. PMID 16907163 DOI: 10.1103/Physreve.74.016119 |
0.652 |
|
| 2006 |
Ben-Jacob E, Levine H. Self-engineering capabilities of bacteria. Journal of the Royal Society, Interface / the Royal Society. 3: 197-214. PMID 16849231 DOI: 10.1098/Rsif.2005.0089 |
0.499 |
|
| 2006 |
Levine H, Kessler DA, Rappel WJ. Directional sensing in eukaryotic chemotaxis: a balanced inactivation model. Proceedings of the National Academy of Sciences of the United States of America. 103: 9761-6. PMID 16782813 DOI: 10.1073/Pnas.0601302103 |
0.333 |
|
| 2006 |
Kerr RA, Levine H, Sejnowski TJ, Rappel WJ. Division accuracy in a stochastic model of Min oscillations in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 103: 347-52. PMID 16387859 DOI: 10.1073/Pnas.0505825102 |
0.499 |
|
| 2006 |
Wylie CS, Levine H, Kessler DA. Fluctuation-induced instabilities in front propagation up a comoving reaction gradient in two dimensions Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 74. DOI: 10.1103/PhysRevE.74.016119 |
0.608 |
|
| 2006 |
Levine H, Ben-Jacob E, Cohen I, Rappel WJ. Swarming patterns in Microorganisms: Some new modeling results Proceedings of the Ieee Conference On Decision and Control. 5073-5077. |
0.404 |
|
| 2005 |
Yang S, Levine H, Onuchic JN, Cox DL. Structure of infectious prions: stabilization by domain swapping. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 19: 1778-82. PMID 16260647 DOI: 10.1096/Fj.05-4067Hyp |
0.697 |
|
| 2005 |
Wang K, Tu Y, Rappel WJ, Levine H. Excitation-contraction coupling gain and cooperativity of the cardiac ryanodine receptor: a modeling approach. Biophysical Journal. 89: 3017-25. PMID 16126827 DOI: 10.1529/Biophysj.105.058958 |
0.558 |
|
| 2005 |
Yang S, Levine H, Onuchic JN. Protein oligomerization through domain swapping: role of inter-molecular interactions and protein concentration. Journal of Molecular Biology. 352: 202-11. PMID 16061250 DOI: 10.1016/J.Jmb.2005.06.062 |
0.705 |
|
| 2005 |
Blinder P, Baruchi I, Volman V, Levine H, Baranes D, Ben Jacob E. Functional topology classification of biological computing networks Natural Computing. 4: 339-361. DOI: 10.1007/S11047-005-3667-6 |
0.657 |
|
| 2004 |
Levine H, Ben-Jacob E. Physical schemata underlying biological pattern formation-examples, issues and strategies. Physical Biology. 1: P14-22. PMID 16204813 DOI: 10.1088/1478-3967/1/2/P01 |
0.496 |
|
| 2004 |
Yang S, Cho SS, Levy Y, Cheung MS, Levine H, Wolynes PG, Onuchic JN. Domain swapping is a consequence of minimal frustration. Proceedings of the National Academy of Sciences of the United States of America. 101: 13786-91. PMID 15361578 DOI: 10.1073/Pnas.0403724101 |
0.675 |
|
| 2003 |
Strain MC, Günthard HF, Havlir DV, Ignacio CC, Smith DM, Leigh-Brown AJ, Macaranas TR, Lam RY, Daly OA, Fischer M, Opravil M, Levine H, Bacheler L, Spina CA, Richman DD, et al. Heterogeneous clearance rates of long-lived lymphocytes infected with HIV: intrinsic stability predicts lifelong persistence. Proceedings of the National Academy of Sciences of the United States of America. 100: 4819-24. PMID 12684537 DOI: 10.1073/Pnas.0736332100 |
0.615 |
|
| 2002 |
Strain MC, Levine H. Comment on "dynamics of HIV infection: a cellular automata approach". Physical Review Letters. 89: 219805. PMID 12443459 DOI: 10.1103/Physrevlett.89.219805 |
0.633 |
|
| 2002 |
Strain MC, Richman DD, Wong JK, Levine H. Spatiotemporal dynamics of HIV propagation. Journal of Theoretical Biology. 218: 85-96. PMID 12297072 DOI: 10.1006/Jtbi.2002.3055 |
0.647 |
|
| 2002 |
Guo C, Cheung MS, Levine H, Kessler DA. Mechanisms of cooperativity underlying sequence-independent β-sheet formation Journal of Chemical Physics. 116: 4353-4365. DOI: 10.1063/1.1448493 |
0.446 |
|
| 2002 |
Pechenik L, Levine H, Kessler DA. Steady-state mode I cracks in a viscoelastic triangular lattice Journal of the Mechanics and Physics of Solids. 50: 583-613. DOI: 10.1016/S0022-5096(01)00061-8 |
0.724 |
|
| 2001 |
Ben-Jacob E, Levine H. The artistry of nature. Nature. 409: 985-6. PMID 11234046 DOI: 10.1038/35059178 |
0.439 |
|
| 2000 |
Guo C, Levine H. A statistical mechanics model for receptor clustering. Journal of Biological Physics. 26: 219-34. PMID 23345723 DOI: 10.1023/A:1010313529687 |
0.427 |
|
| 2000 |
Arouh S, Levine H. Nutrient chemotaxis suppression of a diffusive instability in bacterial colony dynamics. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 62: 1444-7. PMID 11088611 DOI: 10.1103/Physreve.62.1444 |
0.775 |
|
| 2000 |
Guo C, Levine H, Kessler DA. Two state behavior in a solvable model of beta-hairpin folding. Physical Review Letters. 84: 3490-3. PMID 11019122 DOI: 10.1103/Physrevlett.84.3490 |
0.433 |
|
| 2000 |
Guo C, Levine H, Kessler DA. How does a beta -hairpin fold/unfold? competition between topology and heterogeneity in a solvable model. Proceedings of the National Academy of Sciences of the United States of America. 97: 10775-9. PMID 10995462 DOI: 10.1073/Pnas.190103297 |
0.45 |
|
| 1999 |
Guo C, Levine H. A thermodynamic model for receptor clustering. Biophysical Journal. 77: 2358-65. PMID 10545339 DOI: 10.1016/S0006-3495(99)77073-6 |
0.456 |
|
| 1999 |
Pechenik L, Levine H. Interfacial velocity corrections due to multiplicative noise Physical Review E. 59: 3893-3900. DOI: 10.1103/Physreve.59.3893 |
0.753 |
|
| 1998 |
Jiang Y, Levine H, Glazier J. Possible cooperation of differential adhesion and chemotaxis in mound formation of Dictyostelium Biophysical Journal. 75: 2615-2625. PMID 9826586 DOI: 10.1016/S0006-3495(98)77707-0 |
0.433 |
|
| 1998 |
Pechenik L, Levine H. Refraction of waves in excitable media Physical Review E. 58: 2910-2917. DOI: 10.1103/Physreve.58.2910 |
0.732 |
|
| 1997 |
Abawi AT, Dashen RF, Levine H. The eigenvalues of the Laplacian on a sphere with boundary conditions specified on a segment of a great circle Journal of Mathematical Physics. 38: 1623-1649. DOI: 10.1063/1.531820 |
0.553 |
|
| 1997 |
Levine H, Tsimring L, Kessler D. Computational modeling of mound development in Dictyostelium Physica D: Nonlinear Phenomena. 106: 375-388. DOI: 10.1016/S0167-2789(97)00038-9 |
0.327 |
|
| 1996 |
Ridgway D, Levine H, Tu Y. Front stability in mean-field models of diffusion-limited growth. Physical Review E. 53: 861-870. PMID 9964321 DOI: 10.1103/Physreve.53.861 |
0.56 |
|
| 1995 |
Tsimring L, Levine H, Aranson I, Ben-Jacob E, Cohen I, Shochet O, Reynolds WN. Aggregation Patterns in Stressed Bacteria. Physical Review Letters. 75: 1859-1862. PMID 10060409 DOI: 10.1103/Physrevlett.75.1859 |
0.511 |
|
| 1995 |
Ben-Jacob E, Cohen I, Shochet O, Aranson I, Levine H, Tsimring L. Complex bacterial patterns. Nature. 373: 566-7. PMID 7854411 DOI: 10.1038/373566A0 |
0.451 |
|
| 1995 |
Tu Y, Levine H. Mean-field theory of the morphology transition in stochastic diffusion-limited growth Physical Review E. 52: 5134-5141. DOI: 10.1103/Physreve.52.5134 |
0.576 |
|
| 1993 |
Tu Y, Levine H, Ridgway D. Morphology transitions in a mean-field model of diffusion-limited growth Physical Review Letters. 71: 3838-3841. DOI: 10.1103/Physrevlett.71.3838 |
0.572 |
|
| 1993 |
Levine H, Tu Y. Theory of diffusion-limited growth Physical Review E. 48. DOI: 10.1103/Physreve.48.R4207 |
0.561 |
|
| 1993 |
Kessler DA, Levine H. Pattern formation in Dictyostelium via the dynamics of cooperative biological entities Physical Review E. 48: 4801-4804. DOI: 10.1103/Physreve.48.4801 |
0.312 |
|
| 1992 |
Levine H, Tu Y. Mean-field diffusion-limited aggregation in radial geometries Physical Review A. 45: 1053-1057. DOI: 10.1103/Physreva.45.1053 |
0.566 |
|
| 1992 |
Levine H, Tu Y. Mean-field diffusion-limited aggregation and the Saffman-Taylor problem in three dimensions Physical Review A. 45: 1044-1052. DOI: 10.1103/Physreva.45.1044 |
0.558 |
|
| 1991 |
Brener E, Levine H, Tu Y. Mean-field theory for diffusion-limited aggregation in low dimensions. Physical Review Letters. 66: 1978-1981. PMID 10043359 DOI: 10.1103/Physrevlett.66.1978 |
0.538 |
|
| 1991 |
Kessler DA, Levine H, Tu Y. Interface fluctuations in random media Physical Review A. 43: 4551-4554. DOI: 10.1103/Physreva.43.4551 |
0.561 |
|
| 1991 |
Brener E, Levine H, Tu Y. Nonsymmetric Saffman–Taylor fingers Physics of Fluids a: Fluid Dynamics. 3: 529-534. DOI: 10.1063/1.858114 |
0.568 |
|
| 1986 |
Dashen RF, Kessler DA, Levine H, Savit R. The geometrical model of dendritic growth: The small velocity limit Physica D: Nonlinear Phenomena. 21: 371-380. DOI: 10.1016/0167-2789(86)90011-4 |
0.577 |
|
| 1985 |
Levine H, Libby SB. Renormalization of the θ angle, the quantum Hall effect and the strong CP problem Physics Letters B. 150: 182-186. DOI: 10.1016/0370-2693(85)90165-0 |
0.644 |
|
| 1984 |
Bhanot G, Dashen R, Seiberg N, Levine H. Scaling and θ Dependence in the O(3) σ Model Physical Review Letters. 53: 519-522. DOI: 10.1103/Physrevlett.53.519 |
0.559 |
|
| 1984 |
Levine H, Libby SB, Pruisken AMM. Theory of the quantized Hall effect (I) Nuclear Physics, Section B. 240: 30-48. DOI: 10.1016/0550-3213(84)90277-3 |
0.661 |
|
| 1983 |
Levine H, Libby SB, Pruisken AMM. Electron delocalization by a magnetic field in two dimensions Physical Review Letters. 51: 1915-1918. DOI: 10.1103/PhysRevLett.51.1915 |
0.628 |
|
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