| Year |
Citation |
Score |
| 2022 |
Dubey VK, Sarkar SR, Lakshmanan V, Dalmeida R, Gulyani A, Palakodeti D. Smed-ETS-1 regulates cathepsin+ cell function and epidermal lineage landscape via basement membrane remodeling. Journal of Cell Science. PMID 36172824 DOI: 10.1242/jcs.259900 |
0.347 |
|
| 2021 |
Nikhat S, Yadavalli AD, Prusty A, Narayan PK, Palakodeti D, Murre C, Pongubala JMR. A regulatory network of microRNAs confers lineage commitment during early developmental trajectories of B and T lymphocytes. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34750254 DOI: 10.1073/pnas.2104297118 |
0.489 |
|
| 2021 |
Lakshmanan V, T N S, Bansal D, Padubidri SV, Palakodeti D, Krishna S. Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs). Rna (New York, N.Y.). PMID 33446492 DOI: 10.1261/rna.077701.120 |
0.337 |
|
| 2021 |
Krishna S, Raghavan S, DasGupta R, Palakodeti D. tRNA-derived fragments (tRFs): establishing their turf in post-transcriptional gene regulation. Cellular and Molecular Life Sciences : Cmls. PMID 33388834 DOI: 10.1007/s00018-020-03720-7 |
0.315 |
|
| 2019 |
Krishna S, Yim DG, Lakshmanan V, Tirumalai V, Koh JL, Park JE, Cheong JK, Low JL, Lim MJ, Sze SK, Shivaprasad P, Gulyani A, Raghavan S, Palakodeti D, DasGupta R. Dynamic expression of tRNA-derived small RNAs define cellular states. Embo Reports. 20: e47789. PMID 31267708 DOI: 10.15252/Embr.201947789 |
0.386 |
|
| 2018 |
Krishna S, Palakodeti D, Solana J. Post-transcriptional regulation in planarian stem cells. Seminars in Cell & Developmental Biology. PMID 29870807 DOI: 10.1016/j.semcdb.2018.05.013 |
0.435 |
|
| 2017 |
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A, Raghavan S, Palakodeti D. Cytoplasmic poly (A) binding protein (PABPC2) critically regulates epidermal maintenance and turnover in planarian Schmidtea mediterranea. Development (Cambridge, England). PMID 28807897 DOI: 10.1242/dev.152942 |
0.309 |
|
| 2017 |
Arya D, Sachithanandan SP, Ross C, Palakodeti D, Li S, Krishna S. MiRNA182 regulates percentage of myeloid and erythroid cells in chronic myeloid leukemia. Cell Death & Disease. 8: e2547. PMID 28079885 DOI: 10.1038/cddis.2016.471 |
0.487 |
|
| 2016 |
Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D. Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea. G3 (Bethesda, Md.). PMID 27489207 DOI: 10.1534/g3.116.031120 |
0.371 |
|
| 2016 |
Ganesan S, Lakshmanan V, Palani HK, Balasundaram N, Alex AA, David S, Korula A, George B, Balasubramanian P, Gowda H, Vyas N, Palakodeti D, Mathews V. Role of miRNA in Micro-Environment Mediated Drug Resistance in Acute Promyelocytic Leukemia to Arsenic Trioxide Blood. 128: 5125-5125. DOI: 10.1182/blood.V128.22.5125.5125 |
0.355 |
|
| 2016 |
Ganesan S, Palani HK, Lakshmanan V, Balasundaram N, Alex AA, David S, George B, Balasubramanian P, Vyas N, Palakodeti D, Mathews V. Osteoblast Differentiation of Stromal Cells Induced By Leukemic Cells Blood. 128: 5062-5062. DOI: 10.1182/blood.v128.22.5062.5062 |
0.396 |
|
| 2015 |
Rao RA, Dhele N, Cheemadan S, Ketkar A, Jayandharan GR, Palakodeti D, Rampalli S. Ezh2 mediated H3K27me3 activity facilitates somatic transition during human pluripotent reprogramming. Scientific Reports. 5: 8229. PMID 25648270 DOI: 10.1038/srep08229 |
0.367 |
|
| 2014 |
Vyas N, Walvekar A, Tate D, Lakshmanan V, Bansal D, Lo Cicero A, Raposo G, Palakodeti D, Dhawan J. Vertebrate Hedgehog is secreted on two types of extracellular vesicles with different signaling properties. Scientific Reports. 4: 7357. PMID 25483805 DOI: 10.1038/srep07357 |
0.3 |
|
| 2013 |
Sasidharan V, Lu YC, Bansal D, Dasari P, Poduval D, Seshasayee A, Resch AM, Graveley BR, Palakodeti D. Identification of neoblast- and regeneration-specific miRNAs in the planarian Schmidtea mediterranea. Rna (New York, N.Y.). 19: 1394-404. PMID 23974438 DOI: 10.1261/Rna.038653.113 |
0.646 |
|
| 2013 |
Krishna S, Nair A, Cheedipudi S, Poduval D, Dhawan J, Palakodeti D, Ghanekar Y. Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata. Nucleic Acids Research. 41: 599-616. PMID 23166307 DOI: 10.1093/nar/gks1020 |
0.508 |
|
| 2012 |
Resch AM, Palakodeti D, Lu YC, Horowitz M, Graveley BR. Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea. Plos One. 7: e34447. PMID 22496805 DOI: 10.1371/Journal.Pone.0034447 |
0.595 |
|
| 2012 |
Resch AM, Palakodeti D. Small RNA pathways in Schmidtea mediterranea. The International Journal of Developmental Biology. 56: 67-74. PMID 22450996 DOI: 10.1387/ijdb.113436ar |
0.384 |
|
| 2011 |
Hollenbach JP, Resch AM, Palakodeti D, Graveley BR, Heinen CD. Loss of DNA mismatch repair imparts a selective advantage in planarian adult stem cells. Plos One. 6: e21808. PMID 21747960 DOI: 10.1371/Journal.Pone.0021808 |
0.544 |
|
| 2011 |
Eipper-Mains JE, Kiraly DD, Palakodeti D, Mains RE, Eipper BA, Graveley BR. microRNA-Seq reveals cocaine-regulated expression of striatal microRNAs. Rna (New York, N.Y.). 17: 1529-43. PMID 21708909 DOI: 10.1261/Rna.2775511 |
0.595 |
|
| 2009 |
Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR. Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea. Rna (New York, N.Y.). 15: 1483-91. PMID 19553344 DOI: 10.1261/Rna.1702009 |
0.65 |
|
| 2008 |
Palakodeti D, Smielewska M, Lu YC, Yeo GW, Graveley BR. The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians. Rna (New York, N.Y.). 14: 1174-86. PMID 18456843 DOI: 10.1261/Rna.1085008 |
0.559 |
|
| 2006 |
Palakodeti D, Smielewska M, Graveley BR. MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology. Rna (New York, N.Y.). 12: 1640-9. PMID 16849698 DOI: 10.1261/Rna.117206 |
0.66 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2021 |
Biswas R, Banerjee A, Lembo S, Zhao Z, Lakshmanan V, Lim R, Le S, Nakasaki M, Kutyavin V, Wright G, Palakodeti D, Ross RS, Jamora C, Vasioukhin V, Jie Y, et al. Mechanical instability of adherens junctions overrides intrinsic quiescence of hair follicle stem cells. Developmental Cell. PMID 33725480 DOI: 10.1016/j.devcel.2021.02.020 |
0.289 |
|
| 2019 |
Sarkar A, Mukundan N, Sowndarya S, Dubey VK, Babu R, Lakshmanan V, Rangiah K, Panicker MM, Palakodeti D, Subramanian SP, Ramaswamy S. Serotonin is essential for eye regeneration in planaria Schmidtea mediterranea. Febs Letters. PMID 31529697 DOI: 10.1002/1873-3468.13607 |
0.289 |
|
| 2022 |
Haroon MM, Vemula PK, Palakodeti D. Flow Cytometry Analysis of Planarian Stem Cells Using DNA and Mitochondrial Dyes. Bio-Protocol. 12: e4299. PMID 35127989 DOI: 10.21769/BioProtoc.4299 |
0.289 |
|
| 2017 |
Boya R, Yadavalli AD, Nikhat S, Kurukuti S, Palakodeti D, Pongubala JMR. Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment. Nucleic Acids Research. PMID 28977418 DOI: 10.1093/nar/gkx722 |
0.274 |
|
| 2022 |
Corsi GI, Gadekar VP, Haukedal H, Doncheva NT, Anthon C, Ambardar S, Palakodeti D, Hyttel P, Freude K, Seemann SE, Gorodkin J. The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression. Neurobiology of Disease. 105980. PMID 36572121 DOI: 10.1016/j.nbd.2022.105980 |
0.265 |
|
| 2017 |
Vidyanand S, Marepally S, Elliott SA, Baid S, Lakshmanan V, Nayyar N, Bansal D, Sánchez Alvarado A, Vemula PK, Palakodeti D. The miR-124 family of microRNAs is critical for regeneration of the brain and visual system in the planarian Schmidtea mediterranea. Development (Cambridge, England). PMID 28807895 DOI: 10.1242/dev.144758 |
0.256 |
|
| 2015 |
Natarajan N, Ramakrishnan P, Lakshmanan V, Palakodeti D, Rangiah K. A quantitative metabolomics peek into planarian regeneration. The Analyst. 140: 3445-64. PMID 25815385 DOI: 10.1039/c4an02037e |
0.255 |
|
| 2019 |
Ganesan S, Palani HK, Lakshmanan V, Balasundaram N, Alex AA, David S, Venkatraman A, Korula A, George B, Balasubramanian P, Palakodeti D, Vyas N, Mathews V. Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia. Cell Death & Disease. 10: 736. PMID 31570693 DOI: 10.1038/s41419-019-1964-8 |
0.249 |
|
| 2022 |
Hariharan N, Ghosh S, Palakodeti D. The story of rRNA expansion segments: Finding functionality amidst diversity. Wiley Interdisciplinary Reviews. Rna. e1732. PMID 35429135 DOI: 10.1002/wrna.1732 |
0.241 |
|
| 2019 |
Krishna S, Yim DG, Lakshmanan V, Tirumalai V, Koh JL, Park JE, Cheong JK, Low JL, Lim MJ, Sze SK, Shivaprasad P, Gulyani A, Raghavan S, Palakodeti D, DasGupta R. Dynamic expression of tRNA-derived small RNAs define cellular states. Embo Reports. PMID 31186239 DOI: 10.15252/embr.201947789 |
0.216 |
|
| 2021 |
Mohamed Haroon M, Lakshmanan V, Sarkar SR, Lei K, Vemula PK, Palakodeti D. Mitochondrial state determines functionally divergent stem cell population in planaria. Stem Cell Reports. PMID 33861990 DOI: 10.1016/j.stemcr.2021.03.022 |
0.204 |
|
| 2022 |
Sarkar SR, Dubey VK, Jahagirdar A, Lakshmanan V, Haroon MM, Sowndarya S, Sowdhamini R, Palakodeti D. DDX24 is required for muscle fiber organization and the suppression of wound-induced Wnt activity necessary for pole re-establishment during planarian regeneration. Developmental Biology. 488: 11-29. PMID 35523320 DOI: 10.1016/j.ydbio.2022.04.011 |
0.189 |
|
| 2018 |
D'Souza MN, Gowda NKC, Tiwari V, Babu RO, Anand P, Dastidar SG, Singh R, Selvaraja B, Pal R, Ramesh A, Chattarji S, Chandran S, Gulyani A, Palakodeti D, Muddashetty RS. FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation. Iscience. 9: 399-411. PMID 30469012 DOI: 10.1016/j.isci.2018.11.007 |
0.183 |
|
| 2017 |
Javali A, Lakshmanan V, Palakodeti D, Sambasivan R. Micro-RNAs in the unique trans-germ layer potential of the neural crest: A role in the fate choice? Mechanisms of Development. 145: S104. DOI: 10.1016/j.mod.2017.04.272 |
0.178 |
|
| 2022 |
D'Souza MN, Ramakrishna S, Radhakrishna BK, Jhaveri V, Ravindran S, Yeramala L, Nair D, Palakodeti D, Muddashetty RS. Function of FMRP Domains in Regulating Distinct Roles of Neuronal Protein Synthesis. Molecular Neurobiology. PMID 36181660 DOI: 10.1007/s12035-022-03049-1 |
0.171 |
|
| 2018 |
Rangiah K, Palakodeti D. Quantification of Neurotransmitters from Intact and Regenerating Planarians Using UHPLC-MS/SRM Method. Methods in Molecular Biology (Clifton, N.J.). 1774: 555-570. PMID 29916178 DOI: 10.1007/978-1-4939-7802-1_25 |
0.167 |
|
| 2021 |
Subramanian SP, Lakshmanan V, Palakodeti D, Subramanian R. Glycomic and glycotranscriptomic profiling of mucin-type O-glycans in planarian Schmidtea mediterranea. Glycobiology. PMID 34499167 DOI: 10.1093/glycob/cwab097 |
0.156 |
|
| 2021 |
Chakravarthy A, Nandakumar A, George G, Ranganathan S, Umashankar S, Shettigar N, Palakodeti D, Gulyani A, Ramesh A. Engineered RNA biosensors enable ultrasensitive SARS-CoV-2 detection in a simple color and luminescence assay. Life Science Alliance. 4. PMID 34593555 DOI: 10.26508/lsa.202101213 |
0.153 |
|
| 2020 |
Javali A, Lakshmanan V, Palakodeti D, Sambasivan R. Modulation of β-catenin levels regulates cranial neural crest patterning and dispersal into first pharyngeal arch. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 32427396 DOI: 10.1002/dvdy.208 |
0.148 |
|
| 2019 |
D'Souza MN, Gowda NKC, Tiwari V, Babu RO, Anand P, Dastidar SG, Singh R, James OG, Selvaraj B, Pal R, Ramesh A, Chattarji S, Chandran S, Gulyani A, Palakodeti D, et al. FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation. Iscience. 12: 368. PMID 30763793 DOI: 10.1016/j.isci.2019.01.026 |
0.146 |
|
| 2021 |
Chandrasekaran A, Dittlau KS, Corsi GI, Haukedal H, Doncheva NT, Ramakrishna S, Ambardar S, Salcedo C, Schmidt SI, Zhang Y, Cirera S, Pihl M, Schmid B, Nielsen TT, Nielsen JE, ... ... Palakodeti D, et al. Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3. Stem Cell Reports. 16: 2736-2751. PMID 34678206 DOI: 10.1016/j.stemcr.2021.09.013 |
0.119 |
|
| 2019 |
Rao RA, Ketkar AA, Kedia N, Krishnamoorthy VK, Lakshmanan V, Kumar P, Mohanty A, Kumar SD, Raja SO, Gulyani A, Chaturvedi CP, Brand M, Palakodeti D, Rampalli S. KMT1 family methyltransferases regulate heterochromatin-nuclear periphery tethering via histone and non-histone protein methylation. Embo Reports. PMID 30858340 DOI: 10.15252/embr.201643260 |
0.114 |
|
| 2021 |
Jain PK, Jayappa S, Sairam T, Mittal A, Paul S, Rao VJ, Chittora H, Kashyap DK, Palakodeti D, Thangaraj K, Shenthar J, Koranchery R, Rajendran R, Alireza H, Mohanan KS, et al. Ribosomal protein S6 kinase beta-1 gene variants cause hypertrophic cardiomyopathy. Journal of Medical Genetics. PMID 34916228 DOI: 10.1136/jmedgenet-2021-107866 |
0.109 |
|
| 2021 |
Bhattacharjee O, Ayyangar U, Kurbet AS, Lakshmanan V, Palakodeti D, Ginhoux F, Raghavan S. Epithelial-Macrophage Crosstalk Initiates Sterile Inflammation in Embryonic Skin. Frontiers in Immunology. 12: 718005. PMID 34721382 DOI: 10.3389/fimmu.2021.718005 |
0.105 |
|
| 2018 |
Peruvemba SS, Babu P, Palakodeti D, Subramanian R. Identification of multiple isomeric core chitobiose-modified high mannose and paucimannose N-glycans in the planarian. The Journal of Biological Chemistry. PMID 29475940 DOI: 10.1074/jbc.RA117.000782 |
0.102 |
|
| 2021 |
Shettigar N, Chakravarthy A, Umashankar S, Lakshmanan V, Palakodeti D, Gulyani A. Discovery of a body-wide photosensory array that matures in an adult-like animal and mediates eye-brain-independent movement and arousal. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33941643 DOI: 10.1073/pnas.2021426118 |
0.097 |
|
| 2017 |
Shettigar N, Joshi A, Dalmeida R, Gopalkrishna R, Chakravarthy A, Patnaik S, Mathew M, Palakodeti D, Gulyani A. Hierarchies in light sensing and dynamic interactions between ocular and extraocular sensory networks in a flatworm. Science Advances. 3: e1603025. PMID 28782018 DOI: 10.1126/sciadv.1603025 |
0.074 |
|
| 2021 |
Dhar MS, Marwal R, Vs R, Ponnusamy K, Jolly B, Bhoyar RC, Sardana V, Naushin S, Rophina M, Mellan TA, Mishra S, Whittaker C, Fatihi S, Datta M, Singh P, ... ... Palakodeti D, et al. Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India. Science (New York, N.Y.). eabj9932. PMID 34648303 DOI: 10.1126/science.abj9932 |
0.068 |
|
| 2013 |
Rangiah K, Palakodeti D. Comprehensive analysis of neurotransmitters from regenerating planarian extract using an ultrahigh-performance liquid chromatography/mass spectrometry/selected reaction monitoring method. Rapid Communications in Mass Spectrometry : Rcm. 27: 2439-52. PMID 24097401 DOI: 10.1002/rcm.6706 |
0.055 |
|
| 2024 |
Wadhwa K, Malik S, Balaji S, Thiruvengadam R, Bashyam MD, Bhattacharya PK, Behera B, Bhardwaj P, Biswas NK, Das A, Dey A, Dhotre D, Dias M, Dubey P, Dutta S, ... ... Palakodeti D, et al. Correlation of severity & clinical outcomes of COVID-19 with virus variants: A prospective, multicentre hospital network study. The Indian Journal of Medical Research. PMID 38344919 DOI: 10.4103/ijmr.ijmr_1041_23 |
0.016 |
|
| Hide low-probability matches. |