
K Ulrich Ulli Bayer - US grants
Affiliations: | UCHSC, Aurora, CO, United States |
Area:
Synaptic plasticity, Down syndrome, Schizophrenia, Addiction, Stroke, Global cerebral ischemiaWebsite:
http://www.ucdenver.edu/academics/colleges/medicalschool/departments/Pharmacology/faculty/Pages/bayer.aspxWe are testing a new system for linking grants to scientists.
The funding information displayed below comes from the NIH Research Portfolio Online Reporting Tools and the NSF Award Database.The grant data on this page is limited to grants awarded in the United States and is thus partial. It can nonetheless be used to understand how funding patterns influence mentorship networks and vice-versa, which has deep implications on how research is done.
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High-probability grants
According to our matching algorithm, K Ulrich Ulli Bayer is the likely recipient of the following grants.Years | Recipients | Code | Title / Keywords | Matching score |
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2005 — 2006 | Bayer, K. Ulrich | R03Activity Code Description: To provide research support specifically limited in time and amount for studies in categorical program areas. Small grants provide flexibility for initiating studies which are generally for preliminary short-term projects and are non-renewable. |
Cell-Permeable Inibitors Specific For Camkii @ University of Colorado Denver DESCRIPTION (provided by applicant): The Ca +/calmodulin-dependent protein kinase II (CaMKII) is an important mediator of cellular Ca + signals. CaMKII is required for forms of learning and memory and is involved in regulation of dendritic morphology, synapse number and synaptic strength. CaMKII has also been implicated in cell cycle control, insulin secretion, and in ischemia-induced neuronal cell death. Many studies of CaMKII have relied on the pharmacological inhibitor KN93. However, KN93 also inhibits CaMKFV and, more importantly, voltage-dependent Ca2+ channels. Peptide inhibitors of CaMKII related to AIP are widely believed to be more specific, however, they also inhibit other CaM kinases as well as PKA. Thus, a better inhibitor would be a valuable and widely applicable tool. Such an inhibitor should be (i) CaMKII-specific, (ii) cellpermeable to allow easy use in cellular assays, (iii) readily available at reasonable cost or effort, and (iv) should be well characterized to allow educated interpretation of obtained data. As a starting point for such an inhibitor, a naturally occurring CaMKII inhibitory protein termed CaM-KIIN is a very promising source, as it does not affect activity of CaMKIV, PKC or PKA. In this proposal, we will first use peptides derived from the CaM-KIIN sequence to determine the minimally required region necessary for efficient and specific inhibition of CaMKII. We will then make cell permeable peptides based on such minimal inhibitory region, using the permeabilizing ant and tat sequences. The efficiency and specificity of these peptides will first be determined in biochemical assays. We will then determine their effect on substrate phosphorylation within neurons and a non-neuronal expression system; a suitable substrate to be tested is the AMPA-type glutamate receptor subunit GluR1. Then, the inhibitor will be tested for its action on the different modes of CaMKII activity (calcium/calmodulin-stimulated, autonomous by autophosphorylation, and autonomous by NR2B binding). The inhibitor developed and characterized in this proposal will allow easy testing of specific CaMKII functions in various physiological and pathological situations, and may thus lead to new therapeutic avenues, including for stroke. |
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2006 — 2007 | Bayer, K. Ulrich | R21Activity Code Description: To encourage the development of new research activities in categorical program areas. (Support generally is restricted in level of support and in time.) |
Camkii Signaling in Insulin Secretion and Response @ University of Colorado Denver [unreadable] DESCRIPTION (provided by applicant): The level of secreted insulin determines whether nutrients are metabolized for storage, or storage complexes are broken down for generation of energy. Failure to produce insulin -or to properly respond to it- results in diabetes, an illness of epidemic proportions in the US. Insulin is secreted from pancreatic Langerhans' islets in response to high levels of glucose, further potentiated by fatty acids. This requires a rise in intracellular Ca2+ concentration, generated by L-type voltage dependent Ca2+ channels (VDCC). Insulin secretion from beta cells is modulated by signals released from A and D cells, and recent evidence suggests that this may also involve signaling mediated by glutamate, the major excitatory neurotransmitter in brain. Activation of neuronal NMDA- and AMPA-type glutamate receptors leads to Ca2+ influx (directly or via VDCC activation), and thus may contribute to Ca2+ signals also in islet cells. The Ca2+/calmodulin dependent protein kinase II (CaMKII) is established as a key mediator of neuronal Ca2+ signals. CaMKII may also be required for insulin secretion, however, this is largely based on experiments that used inhibitors which also affect other kinases as well as VDCCs. Currently, even the expression of CaMKII isoforms and glutamate-receptor types in Langerhans' islets and their distribution among the different cell types is unclear or controversial. The CaMKII isoforms can differ in their subcellular targeting and their ability to interact with other proteins (including NMDA receptors and possibly VDCCs). The subunit composition of ionotropic glutamate receptors determines channel properties (including Ca2+ conductance) and regulation of targeting. The CaMKII isoform and glutamate receptor subunit composition would thus affect the connection with other signaling molecules and pathways. Our ultimate goal is to determine if and how CaMKII, VDCCs, and glutamate receptors function together in the regulation of nutrient-induced insulin secretion from pancreatic beta cells. Understanding the mechanisms of insulin secretion regulation will allow to devise new therapeutic avenues for treatment of diabetes. In this proposal we will: (1) Determine expression pattern of CaMKII and glutamate receptor isoforms among islet cells. [unreadable] (2) Determine regulation of insulin secretion by CaMKII in isolated islets and in beta cell lines. (3) Test feasibility of methods to study function of specific CaMKII isoforms in beta cells and islets. [unreadable] [unreadable] |
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2007 — 2011 | Bayer, K. Ulrich | R01Activity Code Description: To support a discrete, specified, circumscribed project to be performed by the named investigator(s) in an area representing his or her specific interest and competencies. |
Structural and Catalytic Functions of Camkii in Neurons @ University of Colorado Denver The Ca2+/calmodulin-dependent protein kinase II (CaMKII) is required for forms of learning and memory. In brain, CaMKII is expressed at levels reminiscent of structural proteins (1-2% of total protein), and its 12meric holoenzyme structure allows multiple simultaneous protein interactions. However, structural roles of CaMKII or functions of its interactions with other protein are understood poorly at best. The major excitatory neuro- transmitter in mammalian brain, glutamate, induces two types of CaMKII translocation in hippocampal neurons: To postsynaptic sites upon brief stimulation (0.5-2 min) and to extra-synaptic clusters after extended exposure (3-5 min). Both types of translocation require the multivalent CaMKII holoenzyme structure (unpublished observations). Brief glutamate treatment can induce forms of synaptic plasticity thought to underlie learning and memory, while extended exposure leads to excitotoxicity, a cellular model for ischemic cell death. The goal of this proposal is to test our hypotheses that synaptic translocation requires binding to the NMDA-type glutamate receptor subunit NR2B and is involved in synaptic plasticity, while formation of extrasynaptic clusters is mediated by CaMKII self-association and is involved in ischemic cell death. Elucidating the mechanisms and functions of CaMKII targeting will aid our understanding of synaptic principles underlying higher brain functions and behavior, and provide new therapeutic avenues for ischemic damage. We will accomplish our goal in the following aims (using rat hippocampal and cortical cultures as main model systems for studies in neurons): (1) Determine protein interactions required for subcellular CaMKII localization in neurons. We will identify CaMKII mutations and inhibitors that prevent NR2B-binding or self-association in vitro and determine their effect on GFP-CaMKII localization in neurons. (2) Determine neuroprotective versus neurotoxic effects of CaMKII activity, synaptic targeting, and extrasynaptic clustering. We will make use of an inhibitor of CaMKII activity and clustering, knockdown of expression by RNAi, and overexpressionof CaMKII wildtype and mutants with specific impairments in activity, regulation and targeting. (3) Determine functions of CaMKII in regulation of synapse number and strength. We will make use of the same tools as in (2) and determine effects on synapse number and strength in established assays. |
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2011 — 2015 | Bayer, K. Ulrich | P30Activity Code Description: To support shared resources and facilities for categorical research by a number of investigators from different disciplines who provide a multidisciplinary approach to a joint research effort or from the same discipline who focus on a common research problem. The core grant is integrated with the center's component projects or program projects, though funded independently from them. This support, by providing more accessible resources, is expected to assure a greater productivity than from the separate projects and program projects. |
Rocky Mountain Neurological Disorders Core @ University of Colorado Denver 04 Core D: Machine Shop. C4.1 Rationale. Core D provides machine shop support services to enable (1) specialized imaging, (2) electrical recording and behavioral methods - major features of UCD neuroscience research. As evidenced in section 04.4, the shop provides the ability go beyond the out-of-the-box instrumentation and accessories that are available commercially. We have the ability to alter commercial instruments and equipment to our own specifications, and more importantly to build customized versions from scratch. As such, the shop core allows infrastructure to evolve and change over time ahead of commercially available instruments thereby allowing users to use instruments that lead the application of advanced/novel technologies to neuroscience research. While the main goal is to provide products that aren't commercially available, the shop provides rapid access to products on an as-needed basis, particularly when commercial availability is slow (e.g. electrode holders and amplifier headstage mounts for electrophysiological recording and microscope mounts and stage adaptors for confocal microscopy). In addition, the shop routinely modifies products to meet specific needs. |
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2013 — 2014 | Bayer, K. Ulrich | R21Activity Code Description: To encourage the development of new research activities in categorical program areas. (Support generally is restricted in level of support and in time.) |
Persistent Reversal of Addiction Behavior by a Transient Treatment @ University of Colorado Denver DESCRIPTION (provided by applicant): The Ca2+/calmodulin-dependent protein kinase II (CaMKII) and the NMDA-type glutamate receptor (NMDAR) subunit GluN2B are two central mediators of long-term potentiation (LTP), a form of synaptic plasticity thought to underlie both physiological and maladaptive addiction-related learning and memory.. The proposal will test the hypotheses that transient disruption of the CaMKII/GluN2B complex (a) persistently reverses amphetamine- and cocaine-induced addiction- related behavior and (b) acutely interferes with memory consolidation but does not reverse established memory. These hypotheses are based on recent preliminary data on addiction behavior and on recent results with normal LTP. Notably, the results of this study will be equally significant even if they lead to rejection of our hypotheses (for instance in case we instead find that inhibition of CaMKII activity is sufficient for reversal of addiction behavior, without requirement for disruption of th CaMKII/GluN2B complex). (Aim 1) We will here first establish a pharmacological treatment that disrupts the CaMKII/GluN2B complex in vivo. (Aim 2) Then, we will determine the effect of such treatment on reversal of addiction behavior. This will directly determine feasibility of a novel therapeutic approach to addiction. (Aim 3) Finally, we will determine the effect on normal memory, which is also clinically important. Acute but reversible interference with memory acquisition and even erasure of recent not yet consolidated memory would be clinically acceptable side-effects. However, while an unexpected erasure also of already consolidated memory would be of high scientific impact, it would need to be overcome in therapy development (for instance by targeting a specific brain region, i.e. the NAc, which could be done but would require more intensive care). We will here utilize a highly rigorous pharmaco-genetic approach. While the pharmacological treatment enables determining the therapeutic relevance (by enabling the temporal distinction between prevention and reversal of addiction behavior), two specific mouse mutant will determine target-specificity: a CaMKII knock-out mouse will test for CaMKII-specificity, while a mouse with mutant GluN2B incapable of CaMKII binding will test for the CaMKII/GluN2B complex as the specific target. Importantly, this approach also overcomes potential compensatory effects that are frequently seen in mutant mice: If the mutant mice still develop addiction behavior (either to normal or to somewhat reduced levels) due to such compensatory effects, the pharmacological treatment should be no longer effective in these mice, if their mutation is indeed the relevant target of the treatment. |
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2013 — 2016 | Bayer, K. Ulrich | R01Activity Code Description: To support a discrete, specified, circumscribed project to be performed by the named investigator(s) in an area representing his or her specific interest and competencies. |
Camkii Substrate-Selection in Opposing Forms of Synaptic Plasticity @ University of Colorado Denver DESCRIPTION (provided by applicant): Long-term potentiation (LTP) and depression (LTD) are two opposing forms of Ca2+-dependent synaptic plasticity that are induced by high or low frequency stimulation, respectively, and thought to underlie learning and memory. Over 22 years of research have firmly linked the Ca2+/calmodulin (CaM)-dependent protein kinase II (CaMKII) to LTP regulation. However, recent evidence (including by preliminary results of this proposal) indicates CaMKII requirement also in LTD. Notably, both LTP- and LTD-mechanisms involve T286 auto-phosphorylation, which generates Ca2+ -independent autonomous activity of CaMKII. What, then, controls the opposing downstream response in LTP versus LTD? This proposal will test the hypothesis that LTP- and LTD-stimuli differentially regulate substrate-selectivity of autonomous CaMKII, thereby causing opposite effects on synaptic strength. Recent results showed that autonomous CaMKII is not fully active, but can instead be significantly further stimulated by Ca2+/CaM (at least for regular R-substrates). Preliminary studies showed that such further stimulation of autonomous CaMKII is indeed required for enhancing synaptic strength. Additional preliminary studies showed that phosphorylation of some specific substrates (now termed CaM-protected C-substrates) can instead be significantly inhibited by Ca2+/CaM. Thus, activity of autonomous CaMKII can be bi-directionally regulated by Ca2+/CaM, in a substrate-dependent manner. The specific hypothesis is that phosphorylation of R-substrates is induced by LTP-stimuli and then promotes synaptic potentiation, while phosphorylation of C- substrates is induced by LTD-stimuli and then promotes synaptic depression. Recent results suggested that (-contrary to traditional view-) CaMKII autonomy generated after LTP is quickly reversed, while autonomy after LTD is much more persistent (though generated more slowly). This timecourse of regulation, with CaMKII autonomy significantly outlasting the Ca2+/CaM- stimulus only after LTD but not after LTP, should indeed promote R-substrates and suppress C- substrates during LTP, and suppress R-substrates and promote C-substrates during LTD. Indeed, preliminary studies linked two different C-substrate proteins to the novel functions of CaMKII in postsynaptic LTD mechanisms. Interestingly, one of these proteins also contains an additional R-substrate site, which was instead linked to LTP. This proposal will: (Aim 1) Determine the timecourse of CaMKII autonomy after LTP versus LTD in direct comparison, and determine the requirement of CaMKII autonomy in LTD induction versus maintenance. (In LTP, CaMKII autonomy was recently shown to be required for induction but not maintenance). (Aims 2+3) Two different C-substrates: Determine the biochemical mechanisms and the cellular functions of their phosphorylation during LTD versus suppression during LTP. This will include determining how disrupting the suppression during LTP-stimuli (by disrupting the CaM- protection) functionally affects synaptic potentiation (with the expectation that LTP-stimuli now additionally engage specific LTD-mechanisms mediated by the C-substrates). The results of this proposal will establish a firm link of CaMKII to postsynaptic LTD, elucidate novel CaMKII regulation mechanisms in vitro and in neurons, and provide a mechanistic explanation how autonomous CaMKII can mediate two distinct and opposing forms of synaptic plasticity. |
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2013 — 2017 | Bayer, K. Ulrich (co-PI) Herson, Paco S [⬀] |
R01Activity Code Description: To support a discrete, specified, circumscribed project to be performed by the named investigator(s) in an area representing his or her specific interest and competencies. |
Camkii in Global Cerebral Ischemia @ University of Colorado Denver DESCRIPTION (provided by applicant): Each year in the United States ~600,000 people suffer from cardiac arrest (CA) and receive cardiopulmonary resuscitation (CPR), resulting in hypoxia-ischemia (HI) of the brain and consequently in severe neurological deficits in most of the survivors. No pharmacological treatment is available to improve survival or long-term neurological outcome. Ischemic damage in the brain following cerebral ischemia induced by CA is in large part due to glutamate excitotoxicity triggered by a pathological flood calcium through NMDA-type glutamate receptors (NMDAr), ultimately resulting in neuronal cell death. While the pathology and cascade of events leading to injury following cerebral ischemia is complex, overstimulation of NMDAr is considered the major triggering spark for excitotoxicity and ischemic neuronal damage. Excitotoxic stimulation of NMDAr triggers a series of Ca2+-dependent signaling pathways, including activation of Ca2+/calmodulin-dependent protein kinase II (CaMKII). Our recent findings, and preliminary data, demonstrate that inhibition of CaMKII is a novel approach to minimizing downstream effects of excessive glutamatergic stimulation (excitotoxicity). CaMKII is well established as a major mediator of physiological glutamate signaling involved in synaptic plasticity, particularly synaptic potentiation in CA1 neurons, likel contributing to hippocampal learning. Two major forms of CaMKII regulation have been described, stimulated and autonomous CaMKII activity. Stimulated activity is induced by Ca2+/CaM to CaMKII, and prolonged autonomous (Ca2+-independent) activity is induced by autophosphorylation of residue T286 and/or direct binding to NMDAr subunit NR2B at the synapse (which also mediates CaMKII accumulation at the synapse). Additionally, our preliminary studies reveal a novel link between CaMKII autonomy and nitric oxide (NO), which is produced during excitotoxicity following cerebral ischemia and contributes to oxidative stress and neuronal damage. Our preliminary data indicate that NO-induced nitrosylation/oxidation of CaMKII promotes autonomous CaMKII activity, directly and by protecting T286 from de-phosphorylation. We recently demonstrated that our new CaMKII inhibitor tatCN21 (which blocks both stimulated and autonomous activity) provides robust neuroprotection both in vitro and following experimental stroke. In contrast, traditional CaMKII inhibitors (which block only stimulated activity) do not provide post-insult neuroprotection. This indicates that inhibition of autonomous, but not stimulated CaMKII activity, is a relevant drug target for post-insult neuroprotection. [Importantly, our preliminary results demonstrate that administration of tatCN21 after cardiac arrest results in significant neuroprotection.] The current proposal will utilize our novel mouse CA/CPR model to take advantage of several mutant mouse strains deficient in each form of autonomous CaMKII activity to unravel the complex interactions between these forms of CaMKII activity and their relative contribution to ischemic neuronal cell death. We hypothesize that (i) each autonomy mechanism contributes to neuronal cell death, and that (ii) T286-autophosphorylation mediated CaMKII autonomy is of most direct importance, that (iii) the novel nitrosylation mechanisms contributes to ischemic damage by prolonging T286 phosphorylation, and that (iv) NR2B-binding enables efficient nitrosylation via localizing CaMKII near nNOS. |
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2016 — 2017 | Bayer, K. Ulrich | R21Activity Code Description: To encourage the development of new research activities in categorical program areas. (Support generally is restricted in level of support and in time.) |
Restoring Synaptic Function in Down Syndrome Mice @ University of Colorado Denver Project Summary Down Syndrome (DS) model mice have three abnormalities in synaptic functions that can explain the cognitive deficits in DS: Decreased long-term potentiation (LTP) and enhanced long- term depression (LTD) of glutamatergic synapses, as well as enhanced inhibitory transmission at GABAergic synapses. Our recent published work indicates that all three observed synaptic dysfunction should be caused by the hyper-phosphorylation of the Ca2+/calmodulin-dependent protein kinase II (CaMKII) seen in DS mice. Our recent unpublished work indicates an intriguing possible mechanism for the cause of CaMKII hyper-phosphorylation in the DS mice. Importantly, this mechanism could also be targeted by pharmacological intervention. As a proof of principle, this project will focus on two aspects of the overall question: (Aim 1) Testing the underlying cause for CaMKII hyper-phosphorylation in DS mice (using a new mutant mouse line that has been generated in the lab and that is incompetent for the proposed underlying mechanism); (Aim 2) Restoration of normal LTP by genetic reversal of T305/306 hyper-phosphorylation in DS mice (using a CaMKII T305/306AV mutant mouse line currently available to the lab). Future studies will test restoration of the other synaptic dysfunctions in DS, restoration of cognitive behavioral tasks, and restoration also by pharmacological means. Notably, while it may seem preposterous to propose a reversal of cognitive impairments in a very complex syndrome by a rather simple intervention, there is actually prior precedent for success: In a model of a different genetic condition that causes cognitive impairments, Angelman Syndrome (AS), CaMKII is also hyper-phosphorylated, and even heterozygous T305/306AV mutation was sufficient to restore both normal LTP and spatial learning. In contrast to AS, the hyper-phosphorylation of CaMKII in DS could be targeted also pharmacologically (if our hypothesized underlying mechanism is correct). Thus, this project will not only provide significant further insight into the mechanism underlying normal synaptic functions and their impairments in DS, but also has tremendous potential for directly opening a new therapeutic avenue for restoring cognitive functions in patients with DS. |
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2017 | Bayer, K. Ulrich | U01Activity Code Description: To support a discrete, specified, circumscribed project to be performed by the named investigator(s) in an area representing his or her specific interest and competencies. |
A Strategy For Pharmacological Treatment of Global Cerebral Ischemia @ University of Colorado Denver Project Summary/Abstract Past translational disappointments with stroke have tainted the perception of feasibility also for global cerebral ischemia (GCI). However, stroke and GCI are clearly distinct conditions. The translational potential in GCI is arguably much higher; yet, compared to stroke, much fewer efforts have been made to date (likely due to the smaller market share). GCI is caused by near- drowning or ?suffocation, as well as during heart bypass surgeries. However, most cases result from cardiac arrest (CA) followed by cardio-vascular resuscitation (CPR). Each year, approximately 600,000 Americans suffer from CA and receive CPR. Approximately 60% of the survivors have long-lasting moderate to severe cognitive impairments. Compared to stroke patients, CA/CPR patients are much more homogenous (duration of ischemia; time elapsed between ischemia and hospitalization; always full reperfusion at a well-defined time point). This is expected to provide a significant advantage in future clinical trials (as decreased variability significantly increases statistical power). Our preliminary studies have identified inhibitors that showed high therapeutic potential in a mouse model of CA/CPR that closely mimics the human condition. The inhibitors where injected i.v. at a clinically relevant timepoint after CA/CPR, and showed dramatic improvement. Such improvement was seen also over therapeutic hypothermia alone (the current standard of care); when both treatments were combined, only residual and barely detectable neuronal cell death was seen. In patients, cell death after 2-3 days (measured by serum levels of neuron- specific enolase) is strongly correlated with severity of the long-term outcome. Endpoints tested here additionally included functional effects on synaptic plasticity in the surviving neurons and behavioral outcome in a learning/memory task. Target validation has been done in mutant mice. Mode of target engagement has been characterized biochemically and structurally. The optimized lead compound is highly potent tight binder, with an in vitro IC50<0.4 nM and full therapeutic efficacy in vivo even at 0.01 mg/kg i.v.. The compound is highly selective, shows no hERG channel binding at the therapeutic concentration, and no apparent adverse health effects in mice even at 100fold of the therapeutic dose. Target-specific potential risk-factors have been evaluated in mice, and did not pose problems. Shelf-stability of the compound is very good. This project will collect the remaining data that are required for moving forward to IND- enabling safety studies, in the following four specific aims. Aim 1: Lead optimization through initial safety studies. We will initiate safety studies with a focus on the highest risk factors. If needed, this will be followed by optimization of the lead compound and/or the delivery route. Aim 2: Efficacy in a non-rodent model, specifically determined in a pig CA/CPR model that is established by local collaborators. Two initial doses will be used and efficacy will be compared to mouse based on PK comparison. Additional regimens will be determined based on the results of this and of the subsequent aims. Aim 3: PK and PK/PD relationship, will be determined in both test species after a single bolus and correlated to efficacy. Based on the outcome, booster treatment will be designed and tested. Functional target engagement will be verified by biochemical activity assays. Additionally, we will compare plasma protein binding between the test species and human. Aim 4: Optimization of the treatment regimen in mouse, by testing additional time points and if subsequent booster injections can further improve efficacy. Additionally, long-term functional outcomes after these treatments will be tested. The nature of the optimal treatment regimen will inform the required safety studies during the next development phase. |
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