Cinque S. Soto, Ph.D.
Affiliations: | Columbia University, New York, NY |
Area:
computational biophysics and bioinformaticsGoogle:
"Cinque Soto"Mean distance: 8.77 | S | N | B | C | P |
Parents
Sign in to add mentor| Barry H. Honig | grad student | 2006 | Columbia | |
| (Advances in the rapid prediction of loop conformations in proteins.) | ||||
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Publications
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| Gilchuk P, Bombardi RG, Erasmus JH, et al. (2020) Integrated pipeline for the accelerated discovery of antiviral antibody therapeutics. Nature Biomedical Engineering |
| Soto C, Finn JA, Willis JR, et al. (2020) PyIR: a scalable wrapper for processing billions of immunoglobulin and T cell receptor sequences using IgBLAST. Bmc Bioinformatics. 21: 314 |
| Schmitz S, Soto C, Crowe JE, et al. (2020) Human-likeness of antibody biologics determined by back-translation and comparison with large antibody variable gene repertoires. Mabs. 12: 1758291 |
| Sevy AM, Soto C, Bombardi RG, et al. (2019) Immune repertoire fingerprinting by principal component analysis reveals shared features in subject groups with common exposures. Bmc Bioinformatics. 20: 629 |
| Bennett MR, Dong J, Bombardi RG, et al. (2019) Human Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis. Mbio. 10 |
| Lemmin T, Soto CS. (2019) Glycosylator: a Python framework for the rapid modeling of glycans. Bmc Bioinformatics. 20: 1-7 |
| Janus BM, Dyk Nv, Zhao X, et al. (2018) Structural basis for broad neutralization of ebolaviruses by an antibody targeting the glycoprotein fusion loop. Nature Communications. 9: 3934-3934 |
| Lemmin T, Soto C, Stuckey J, et al. (2017) Microsecond Dynamics and Network Analysis of the HIV-1 SOSIP Env Trimer Reveal Collective Behavior and Conserved Microdomains of the Glycan Shield. Structure (London, England : 1993) |
| Zhou T, Doria-Rose NA, Cheng C, et al. (2017) Quantification of the Impact of the HIV-1-Glycan Shield on Antibody Elicitation. Cell Reports. 19: 719-732 |
| Shahzad-Ul-Hussan S, Sastry M, Lemmin T, et al. (2017) NMR insights into the conformational properties of Man-9 and its recognition by two HIV binding proteins. Chembiochem : a European Journal of Chemical Biology |