Endre T. Somogyi, Ph.D.

Affiliations: 
2014 Physics Indiana University, Bloomington, Bloomington, IN, United States 
Area:
systems biology, physical chemistry
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Peter J. Ortoleva grad student 2014 Indiana University Bloomington
 (Simulation of electrochemical and stochastic systems using Just in Time compiled declarative languages.)
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Publications

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Somogyi E, Sluka JP, Glazier JA. (2016) Formalizing Knowledge in Multi-Scale Agent-Based Simulations. Model Driven Engineering Languages and Systems : ... International Conference, Models ... : Proceedings. Models (Conference). 16: 115-122
Somogyi E, Mansour AA, Ortoleva PJ. (2016) ProtoMD: A prototyping toolkit for multiscale molecular dynamics Computer Physics Communications. 202: 337-350
Somogyi ET, Bouteiller JM, Glazier JA, et al. (2015) libRoadRunner: A High Performance SBML Simulation and Analysis Library. Bioinformatics (Oxford, England)
Joshi H, Cheluvaraja S, Somogyi E, et al. (2011) A molecular dynamics study of loop fluctuation in human papillomavirus type 16 virus-like particles: a possible indicator of immunogenicity. Vaccine. 29: 9423-30
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