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| Ni Y, Vafaee F. (2018) Null surgery on knots in L-spaces Transactions of the American Mathematical Society. 372: 8279-8306 |
| Ni Y, Zhang X. (2017) Detection of knots and a cabling formula for A-polynomials Algebraic & Geometric Topology. 17: 65-109 |
| Wu DD, Fu HH, Gu L, et al. (2014) Thermal spin filtering, thermal spin switching and negative-differential-resistance in thermal spin currents in zigzag SiC nanoribbons. Physical Chemistry Chemical Physics : Pccp. 16: 17493-8 |
| Ni Y. (2013) Nonseparating spheres and twisted heegaard floer homology Algebraic and Geometric Topology. 13: 1143-1159 |
| Singh A, Hodgson N, Yan M, et al. (2012) Screening Helicobacter pylori genes induced during infection of mouse stomachs. World Journal of Gastroenterology. 18: 4323-34 |
| Hedden M, Ni Y. (2010) Manifolds with small Heegaard Floer ranks Geometry and Topology. 14: 1479-1501 |
| Ni Y. (2009) Link Floer homology detects the Thurston norm Geometry and Topology. 13: 2991-3019 |
| Ai Y, Ni Y. (2009) Two applications of twisted floer homology International Mathematics Research Notices. 2009: 3726-3746 |
| Ni Y. (2007) Knot Floer homology detects fibred knots Inventiones Mathematicae. 170: 577-608 |
| Ni Y. (2006) A note on knot Floer homology of links Geometry and Topology. 10: 695-713 |