Tommi S. Jaakkola
Affiliations: | Massachusetts Institute of Technology, Cambridge, MA, United States |
Website:
http://people.csail.mit.edu/tommi/Google:
"Tommi Jaakkola"Mean distance: 14.36 (cluster 29) | S | N | B | C | P |
Children
Sign in to add traineeZiv Bar-Joseph | grad student | MIT (MathTree) | |
Tatsunori Hashimoto | grad student | MIT (MathTree) | |
David Sontag | grad student | MIT (Computer Science Tree) | |
Martin Wainwright | grad student | MIT | |
Tony Jebara | grad student | 1999-2002 | MIT |
Nathan Srebro | grad student | 2004 | MIT (MathTree) |
Claire Monteleoni | grad student | 2006 | MIT |
David Alvarez-Melis | grad student | 2019 | MIT |
Shubhendu Trivedi | post-doc | MIT |
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Publications
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Yang K, Swanson K, Jin W, et al. (2019) Analyzing Learned Molecular Representations for Property Prediction. Journal of Chemical Information and Modeling |
Coley CW, Jin W, Rogers L, et al. (2019) A graph-convolutional neural network model for the prediction of chemical reactivity. Chemical Science. 10: 370-377 |
Hazan T, Orabona F, Sarwate AD, et al. (2019) High Dimensional Inference With Random Maximum A-Posteriori Perturbations Ieee Transactions On Information Theory. 65: 6539-6560 |
Mueller J, Jaakkola T, Gifford D. (2018) Modeling Persistent Trends in Distributions. Journal of the American Statistical Association. 113: 1296-1310 |
Coley CW, Barzilay R, Green WH, et al. (2017) Convolutional embedding of attributed molecular graphs for physical property prediction. Journal of Chemical Information and Modeling |
Hashimoto TB, Sherwood R, Kang DD, et al. (2016) A synergistic DNA logic predicts genome-wide chromatin accessibility. Genome Research |
Hashimoto TB, Alvarez-Melis D, Jaakkola TS. (2016) Word Embeddings as Metric Recovery in Semantic Spaces Transactions of the Association For Computational Linguistics. 4: 273-286 |
Sherwood RI, Hashimoto T, O'Donnell CW, et al. (2014) Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape. Nature Biotechnology. 32: 171-8 |
Hashimoto T, Jaakkola T, Sherwood R, et al. (2012) Lineage-based identification of cellular states and expression programs. Bioinformatics (Oxford, England). 28: i250-7 |
Guo Y, Papachristoudis G, Altshuler RC, et al. (2010) Discovering homotypic binding events at high spatial resolution. Bioinformatics (Oxford, England). 26: 3028-34 |