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Gene W. Yeo, PhD, MBA

Affiliations: 
Cellular and Molecular Medicine University of California, San Diego, La Jolla, CA 
Area:
RNA processing, neurodevelopment, neurodegeneration, computational biology
Website:
http://yeolab.ucsd.edu/yeolab/Home.html
Google:
"Gene Yeo"
Bio:

http://yeolab.ucsd.edu/yeolab/Gene_Yeo.html
http://hdl.handle.net/1721.1/28853

Mean distance: 12.96 (cluster 17)
 
SNBCP
Cross-listing: Computational Biology Tree

Parents

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Christopher B. Burge grad student 2004 MIT (Computational Biology Tree)
 (Identification, improved modeling and integration of signals to predict constitutive and altering splicing)
Tomaso A. Poggio grad student 2004 MIT
Fred H. (Rusty) Gage post-doc 2005-2008 Salk Institute

Children

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Samuel S. Park research assistant UCSD
En-Ching Luo grad student 2014- UCSD
Noorsher Ahmed grad student 2017- UC San Diego Health
Mary E. Winn grad student 2011 UCSD
Anne Conway grad student 2014 UCSD
Boyko Kakaradov grad student 2014 UCSD
Olga B Botvinnik grad student 2013-2017 UCSD
Norah Al-Azzam grad student 2021-2024 UCSD
BETA: Related publications

Publications

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Al-Azzam N, To JH, Gautam V, et al. (2024) Inhibition of RNA splicing triggers CHMP7 nuclear entry, impacting TDP-43 function and leading to the onset of ALS cellular phenotypes. Neuron
Gosztyla ML, Zhan L, Olson S, et al. (2024) Integrated multi-omics analysis of zinc-finger proteins uncovers roles in RNA regulation. Molecular Cell
Street LA, Rothamel KL, Brannan KW, et al. (2024) Large-scale map of RNA-binding protein interactomes across the mRNA life cycle. Molecular Cell
Liang Q, Yu T, Kofman E, et al. (2024) High-sensitivity in situ capture of endogenous RNA-protein interactions in fixed cells and primary tissues. Nature Communications. 15: 7067
Xiang JS, Schafer DM, Rothamel KL, et al. (2024) Decoding protein-RNA interactions using CLIP-based methodologies. Nature Reviews. Genetics
Her H, Rothamel KL, Nguyen GG, et al. (2024) Mudskipper detects combinatorial RNA binding protein interactions in multiplexed CLIP data. Cell Genomics. 4: 100603
Smargon AA, Pant D, Glynne S, et al. (2024) Small nuclear RNAs enhance protein-free RNA-programmable base conversion on mammalian coding transcripts. Biorxiv : the Preprint Server For Biology
Hawkins S, Mondaini A, Namboori SC, et al. (2024) ePRINT: exonuclease assisted mapping of protein-RNA interactions. Genome Biology. 25: 140
Mah CK, Ahmed N, Lopez NA, et al. (2024) Bento: a toolkit for subcellular analysis of spatial transcriptomics data. Genome Biology. 25: 82
Enustun E, Armbruster EG, Lee J, et al. (2024) A phage nucleus-associated RNA-binding protein is required for jumbo phage infection. Nucleic Acids Research
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