Anna Vangone
Affiliations: | 2013-2017 | Utrecht University, Utrecht, Netherlands |
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| Schwarz D, Georges G, Kelm S, et al. (2021) Co-evolutionary Distance Predictions Contain Flexibility Information. Bioinformatics (Oxford, England) |
| Elez K, Bonvin AMJJ, Vangone A. (2020) Biological vs. Crystallographic Protein Interfaces: An Overview of Computational Approaches for Their Classification Crystals. 10: 114 |
| Koukos PI, Roel-Touris J, Ambrosetti F, et al. (2019) An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45. Proteins |
| Jiménez-García B, Elez K, Koukos PI, et al. (2019) PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes. Bioinformatics (Oxford, England) |
| Vangone A, Schaarschmidt J, Koukos P, et al. (2019) Large-scale prediction of binding affinity in protein-small ligand complexes: the PRODIGY-LIG web server. Bioinformatics (Oxford, England). 35: 1585-1587 |
| Geng C, Vangone A, Folkers GE, et al. (2018) iSEE: Interface Structure, Evolution and Energy-based machine learning predictor of binding affinity changes upon mutations. Proteins |
| Vangone A, Bonvin AMJJ. (2017) PRODIGY: A Contact-based Predictor of Binding Affinity in Protein-protein Complexes. Bio-Protocol. 7: e2124 |
| Kurkcuoglu Z, Koukos PI, Citro N, et al. (2017) Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2. Journal of Computer-Aided Molecular Design |
| Vangone A, Rodrigues JPGLM, Xue LC, et al. (2017) Sense and Simplicity in HADDOCK Scoring: Lessons from CASP-CAPRI (page 418). Proteins. 85: 1589-1590 |
| de Bruin RC, Stam AG, Vangone A, et al. (2016) Prevention of Vγ9Vδ2 T Cell Activation by a Vγ9Vδ2 TCR Nanobody. Journal of Immunology (Baltimore, Md. : 1950) |