Tongye Shen
Affiliations: | 2002 | University of California, San Diego, La Jolla, CA |
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"Tongye Shen"Mean distance: 13.07 | S | N | B | C | P |
Parents
Sign in to add mentorJosé Nelson Onuchic | grad student | 2002 | UCSD | |
(Fluctuations and stochastic dynamics in molecular biophysics.) |
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Publications
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Das P, Golloshi R, McCord RP, et al. (2020) Using contact statistics to characterize structure transformation of biopolymer ensembles. Physical Review. E. 101: 012419 |
Pham B, Lindsay RJ, Shen T. (2018) Effector Binding-Directed Dimerization and Dynamic Communication between Allosteric Sites of Ribonucleotide Reductase. Biochemistry |
Lindsay RJ, Pham B, Shen T, et al. (2018) Characterizing the 3D structure and dynamics of chromosomes and proteins in a common contact matrix framework. Nucleic Acids Research |
Johnson QR, Lindsay RJ, Shen T. (2018) CAMERRA: An analysis tool for the computation of conformational dynamics by evaluating residue-residue associations. Journal of Computational Chemistry |
Lindsay RJ, Siess J, Lohry DP, et al. (2018) Characterizing protein conformations by correlation analysis of coarse-grained contact matrices. The Journal of Chemical Physics. 148: 025101 |
Lindsay RJ, Johnson QR, Evangelista W, et al. (2016) DMSO enhanced conformational switch of an interfacial enzyme. Biopolymers |
Clark AK, Wilder JH, Grayson AW, et al. (2016) The Promiscuity of Allosteric Regulation of Nuclear Receptors by Retinoid X Receptor. The Journal of Physical Chemistry. B |
Johnson QR, Lindsay RJ, Nellas RB, et al. (2016) Pressure induced conformational switch of an interfacial protein lipase. Proteins |
Johnson QR, Lindsay RJ, Petridis L, et al. (2015) Investigation of Carbohydrate Recognition via Computer Simulation. Molecules (Basel, Switzerland). 20: 7700-18 |
Johnson QR, Lindsay RJ, Nellas RB, et al. (2015) Mapping allostery through computational glycine scanning and correlation analysis of residue-residue contacts. Biochemistry. 54: 1534-41 |