| Year |
Citation |
Score |
| 2022 |
Lundberg DS, de Pedro Jové R, Pramoj Na Ayutthaya P, Karasov TL, Shalev O, Poersch K, Ding W, Bollmann-Giolai A, Bezrukov I, Weigel D. Contrasting patterns of microbial dominance in the phyllosphere. Proceedings of the National Academy of Sciences of the United States of America. 119: e2211881119. PMID 36538480 DOI: 10.1073/pnas.2211881119 |
0.379 |
|
| 2022 |
Shalev O, Karasov TL, Lundberg DS, Ashkenazy H, Pramoj Na Ayutthaya P, Weigel D. Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant. Nature Ecology & Evolution. PMID 35210578 DOI: 10.1038/s41559-022-01673-7 |
0.312 |
|
| 2021 |
Lundberg DS, Pramoj Na Ayutthaya P, Strauß A, Shirsekar G, Lo WS, Lahaye T, Weigel D. Host-associated microbe PCR (hamPCR) enables convenient measurement of both microbial load and community composition. Elife. 10. PMID 34292157 DOI: 10.7554/eLife.66186 |
0.322 |
|
| 2020 |
Regalado J, Lundberg DS, Deusch O, Kersten S, Karasov T, Poersch K, Shirsekar G, Weigel D. Combining whole-genome shotgun sequencing and rRNA gene amplicon analyses to improve detection of microbe-microbe interaction networks in plant leaves. The Isme Journal. PMID 32405027 DOI: 10.1038/S41396-020-0665-8 |
0.483 |
|
| 2018 |
Karasov TL, Almario J, Friedemann C, Ding W, Giolai M, Heavens D, Kersten S, Lundberg DS, Neumann M, Regalado J, Neher RA, Kemen E, Weigel D. Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales. Cell Host & Microbe. 24: 168-179.e4. PMID 30001519 DOI: 10.1016/J.Chom.2018.06.011 |
0.4 |
|
| 2018 |
Lundberg DS, Teixeira PJPL. Root-exuded coumarin shapes the root microbiome. Proceedings of the National Academy of Sciences of the United States of America. PMID 29764997 DOI: 10.1073/Pnas.1805944115 |
0.479 |
|
| 2017 |
Levy A, Salas Gonzalez I, Mittelviefhaus M, Clingenpeel S, Herrera Paredes S, Miao J, Wang K, Devescovi G, Stillman K, Monteiro F, Rangel Alvarez B, Lundberg DS, Lu TY, Lebeis S, Jin Z, et al. Genomic features of bacterial adaptation to plants. Nature Genetics. PMID 29255260 DOI: 10.1038/S41588-017-0012-9 |
0.417 |
|
| 2017 |
Rowan BA, Seymour DK, Chae E, Lundberg DS, Weigel D. Methods for Genotyping-by-Sequencing. Methods in Molecular Biology (Clifton, N.J.). 1492: 221-242. PMID 27822868 DOI: 10.1007/978-1-4939-6442-0_16 |
0.319 |
|
| 2016 |
Wagner MR, Lundberg DS, Del Rio TG, Tringe SG, Dangl JL, Mitchell-Olds T. Host genotype and age shape the leaf and root microbiomes of a wild perennial plant. Nature Communications. 7: 12151. PMID 27402057 DOI: 10.1038/Ncomms12151 |
0.439 |
|
| 2016 |
Biswas S, Mcdonald M, Lundberg DS, Dangl JL, Jojic V. Learning Microbial Interaction Networks from Metagenomic Count Data. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 23: 526-535. PMID 27267776 DOI: 10.1089/Cmb.2016.0061 |
0.337 |
|
| 2016 |
Johnston-Monje D, Lundberg DS, Lazarovits G, Reis VM, Raizada MN. Bacterial populations in juvenile maize rhizospheres originate from both seed and soil Plant and Soil. 405: 337-355. DOI: 10.1007/S11104-016-2826-0 |
0.479 |
|
| 2015 |
Lebeis SL, Paredes SH, Lundberg DS, Breakfield N, Gehring J, McDonald M, Malfatti S, Glavina Del Rio T, Jones CD, Tringe SG, Dangl JL. Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa. Science (New York, N.Y.). PMID 26184915 DOI: 10.1126/Science.Aaa8764 |
0.523 |
|
| 2015 |
Tennessen K, Andersen E, Clingenpeel S, Rinke C, Lundberg DS, Han J, Dangl JL, Ivanova N, Woyke T, Kyrpides N, Pati A. ProDeGe: a computational protocol for fully automated decontamination of genomes. The Isme Journal. PMID 26057843 DOI: 10.1038/Ismej.2015.100 |
0.373 |
|
| 2015 |
Wagner MR, Lundberg DS, Coleman-Derr D, Tringe SG, Dangl JL, Mitchell-Olds T. Corrigendum to Wagner et al.: Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative [Ecology Letters 18(2), (2014) 218-220] Ecology Letters. 18: 218-220. DOI: 10.1111/Ele.12400 |
0.332 |
|
| 2014 |
Yourstone SM, Lundberg DS, Dangl JL, Jones CD. MT-Toolbox: improved amplicon sequencing using molecule tags. Bmc Bioinformatics. 15: 284. PMID 25149069 DOI: 10.1186/1471-2105-15-284 |
0.489 |
|
| 2014 |
Wagner MR, Lundberg DS, Coleman-Derr D, Tringe SG, Dangl JL, Mitchell-Olds T. Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative. Ecology Letters. 17: 717-26. PMID 24698177 DOI: 10.1111/Ele.12276 |
0.384 |
|
| 2013 |
Lundberg DS, Yourstone S, Mieczkowski P, Jones CD, Dangl JL. Practical innovations for high-throughput amplicon sequencing. Nature Methods. 10: 999-1002. PMID 23995388 DOI: 10.1038/Nmeth.2634 |
0.502 |
|
| 2012 |
Lundberg DS, Lebeis SL, Paredes SH, Yourstone S, Gehring J, Malfatti S, Tremblay J, Engelbrektson A, Kunin V, del Rio TG, Edgar RC, Eickhorst T, Ley RE, Hugenholtz P, Tringe SG, et al. Defining the core Arabidopsis thaliana root microbiome. Nature. 488: 86-90. PMID 22859206 DOI: 10.1038/Nature11237 |
0.467 |
|
| 2008 |
Goel AK, Lundberg D, Torres MA, Matthews R, Akimoto-Tomiyama C, Farmer L, Dangl JL, Grant SR. The Pseudomonas syringae type III effector HopAM1 enhances virulence on water-stressed plants. Molecular Plant-Microbe Interactions : Mpmi. 21: 361-70. PMID 18257685 DOI: 10.1094/Mpmi-21-3-0361 |
0.36 |
|
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