Nikolay G. Kolev, Ph.D. - Publications

Affiliations: 
2003 University of Notre Dame, Notre Dame, IN, United States 
Area:
Molecular and Cell Biology, Structural Biology

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Toh JY, Nkouawa A, Dong G, Kolev NG, Tschudi C. Two cold shock domain containing proteins trigger the development of infectious Trypanosoma brucei. Plos Pathogens. 19: e1011438. PMID 37276216 DOI: 10.1371/journal.ppat.1011438  0.359
2022 Budzak J, Jones R, Tschudi C, Kolev NG, Rudenko G. An assembly of nuclear bodies associates with the active VSG expression site in African trypanosomes. Nature Communications. 13: 101. PMID 35013170 DOI: 10.1038/s41467-021-27625-6  0.361
2021 Toh JY, Nkouawa A, Sánchez SR, Shi H, Kolev NG, Tschudi C. Identification of positive and negative regulators in the stepwise developmental progression towards infectivity in Trypanosoma brucei. Scientific Reports. 11: 5755. PMID 33707699 DOI: 10.1038/s41598-021-85225-2  0.391
2019 Kolev NG, Rajan KS, Tycowski KT, Toh JY, Shi H, Lei Y, Michaeli S, Tschudi C. The vault RNA of plays a role in the production of -spliced mRNA. The Journal of Biological Chemistry. PMID 31439669 DOI: 10.1074/Jbc.Ra119.008580  0.604
2018 Kolev NG, Ramsdell TK, Tschudi C. Temperature shift activates bloodstream VSG expression site promoters in Trypanosoma brucei. Molecular and Biochemical Parasitology. PMID 30399391 DOI: 10.1016/J.Molbiopara.2018.10.003  0.492
2017 Christiano R, Kolev NG, Shi H, Ullu E, Walther TC, Tschudi C. The proteome and transcriptome of the infectious metacyclic form of Trypanosoma brucei define quiescent cells primed for mammalian invasion. Molecular Microbiology. PMID 28742275 DOI: 10.1111/Mmi.13754  0.503
2017 Kolev NG, Günzl A, Tschudi C. Metacyclic VSG expression site promoters are recognized by the same general transcription factor that is required for RNA polymerase I transcription of bloodstream expression sites. Molecular and Biochemical Parasitology. 216: 52-55. PMID 28716719 DOI: 10.1016/J.Molbiopara.2017.07.002  0.506
2017 Chikne V, Gupta SK, Doniger T, Shanmugha Rajan K, Cohen-Chalamish S, Ben-Asher HW, Kolet L, Yahia NH, Unger R, Ullu E, Kolev NG, Tschudi C, Michaeli S. The canonical poly (A) polymerase PAP1 polyadenylates non-coding RNAs and is essential for snoRNA biogenesis in Trypanosoma brucei. Journal of Molecular Biology. PMID 28456523 DOI: 10.1016/J.Jmb.2017.04.015  0.557
2016 Savage AF, Kolev NG, Franklin JB, Vigneron A, Aksoy S, Tschudi C. Transcriptome Profiling of Trypanosoma brucei Development in the Tsetse Fly Vector Glossina morsitans. Plos One. 11: e0168877. PMID 28002435 DOI: 10.1371/Journal.Pone.0168877  0.511
2015 Eliaz D, Doniger T, Tkacz ID, Gupta SK, Kolev NG, Unger R, Ullu E, Tschudi C, Michaeli S. Genome-wide analysis of small nucleolar RNAs of Leishmania major reveals a rich repertoire of RNAs involved in modification and processing of rRNA. Rna Biology. 0. PMID 25970223 DOI: 10.1080/15476286.2015.1038019  0.528
2015 Ramey-Butler K, Ullu E, Kolev NG, Tschudi C. Synchronous expression of individual metacyclic variant surface glycoprotein genes in Trypanosoma brucei. Molecular and Biochemical Parasitology. 200: 1-4. PMID 25896436 DOI: 10.1016/J.Molbiopara.2015.04.001  0.42
2015 Kolev NG, Ullu E, Tschudi C. Construction of Trypanosoma brucei Illumina RNA-Seq libraries enriched for transcript ends. Methods in Molecular Biology (Clifton, N.J.). 1201: 165-75. PMID 25388113 DOI: 10.1007/978-1-4939-1438-8_9  0.623
2014 Kolev NG, Ullu E, Tschudi C. The emerging role of RNA-binding proteins in the life cycle of Trypanosoma brucei. Cellular Microbiology. 16: 482-9. PMID 24438230 DOI: 10.1111/Cmi.12268  0.465
2012 Kolev NG, Ramey-Butler K, Cross GA, Ullu E, Tschudi C. Developmental progression to infectivity in Trypanosoma brucei triggered by an RNA-binding protein. Science (New York, N.Y.). 338: 1352-3. PMID 23224556 DOI: 10.1126/Science.1229641  0.431
2012 Barnes RL, Shi H, Kolev NG, Tschudi C, Ullu E. Comparative genomics reveals two novel RNAi factors in Trypanosoma brucei and provides insight into the core machinery. Plos Pathogens. 8: e1002678. PMID 22654659 DOI: 10.1371/Journal.Ppat.1002678  0.453
2012 Atayde VD, Ullu E, Kolev NG. A single-cloning-step procedure for the generation of RNAi plasmids producing long stem-loop RNA. Molecular and Biochemical Parasitology. 184: 55-8. PMID 22542486 DOI: 10.1016/J.Molbiopara.2012.04.003  0.507
2011 Kolev NG, Tschudi C, Ullu E. RNA interference in protozoan parasites: achievements and challenges. Eukaryotic Cell. 10: 1156-63. PMID 21764910 DOI: 10.1128/Ec.05114-11  0.437
2010 Kolev NG, Franklin JB, Carmi S, Shi H, Michaeli S, Tschudi C. The transcriptome of the human pathogen Trypanosoma brucei at single-nucleotide resolution. Plos Pathogens. 6: e1001090. PMID 20838601 DOI: 10.1371/Journal.Ppat.1001090  0.544
2009 Patrick KL, Shi H, Kolev NG, Ersfeld K, Tschudi C, Ullu E. Distinct and overlapping roles for two Dicer-like proteins in the RNA interference pathways of the ancient eukaryote Trypanosoma brucei. Proceedings of the National Academy of Sciences of the United States of America. 106: 17933-8. PMID 19815526 DOI: 10.1073/Pnas.0907766106  0.512
2009 Kolev NG, Ullu E. snoRNAs in Giardia lamblia: a novel role in RNA silencing? Trends in Parasitology. 25: 348-50. PMID 19616476 DOI: 10.1016/J.Pt.2009.05.001  0.515
2008 Kolev NG, Hartland EI, Huber PW. A manganese-dependent ribozyme in the 3'-untranslated region of Xenopus Vg1 mRNA. Nucleic Acids Research. 36: 5530-9. PMID 18753150 DOI: 10.1093/Nar/Gkn530  0.635
2008 Kolev NG, Yario TA, Benson E, Steitz JA. Conserved motifs in both CPSF73 and CPSF100 are required to assemble the active endonuclease for histone mRNA 3'-end maturation. Embo Reports. 9: 1013-8. PMID 18688255 DOI: 10.1038/Embor.2008.146  0.563
2008 Friend K, Kolev NG, Shu MD, Steitz JA. Minor-class splicing occurs in the nucleus of the Xenopus oocyte. Rna (New York, N.Y.). 14: 1459-62. PMID 18567814 DOI: 10.1261/Rna.1119708  0.463
2006 Kolev NG, Steitz JA. In vivo assembly of functional U7 snRNP requires RNA backbone flexibility within the Sm-binding site. Nature Structural & Molecular Biology. 13: 347-53. PMID 16547514 DOI: 10.1038/Nsmb1075  0.525
2005 Kolev NG, Steitz JA. Symplekin and multiple other polyadenylation factors participate in 3'-end maturation of histone mRNAs. Genes & Development. 19: 2583-92. PMID 16230528 DOI: 10.1101/Gad.1371105  0.525
2003 Kolev NG, Huber PW. VgRBP71 stimulates cleavage at a polyadenylation signal in Vg1 mRNA, resulting in the removal of a cis-acting element that represses translation. Molecular Cell. 11: 745-55. PMID 12667456 DOI: 10.1016/S1097-2765(03)00071-6  0.615
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