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Toru Aonishi - Publications

Affiliations: 
Tokyo Institute of Technology, Yokohama-shi, Kanagawa-ken, Japan 
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58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Gunathilaka MDSH, Kako S, Inui Y, Mimura K, Okada M, Yamamoto Y, Aonishi T. Effective implementation of [Formula: see text]-regularised compressed sensing with chaotic-amplitude-controlled coherent Ising machines. Scientific Reports. 13: 16140. PMID 37752336 DOI: 10.1038/s41598-023-43364-8  0.349
2022 Ito T, Ota K, Ueno K, Oisi Y, Matsubara C, Kobayashi K, Ohkura M, Nakai J, Murayama M, Aonishi T. Low computational-cost cell detection method for calcium imaging data. Neuroscience Research. PMID 35382938 DOI: 10.1016/j.neures.2022.02.008  0.537
2021 Aonishi T, Maruyama R, Ito T, Miyakawa H, Murayama M, Ota K. Imaging data analysis using non-negative matrix factorization. Neuroscience Research. PMID 34953961 DOI: 10.1016/j.neures.2021.12.001  0.677
2021 Ota K, Oisi Y, Suzuki T, Ikeda M, Ito Y, Ito T, Uwamori H, Kobayashi K, Kobayashi M, Odagawa M, Matsubara C, Kuroiwa Y, Horikoshi M, Matsushita J, Hioki H, ... ... Aonishi T, et al. Fast, cell-resolution, contiguous-wide two-photon imaging to reveal functional network architectures across multi-modal cortical areas. Neuron. PMID 33878295 DOI: 10.1016/j.neuron.2021.03.032  0.55
2019 Kato I, Innami K, Sakuma K, Miyakawa H, Inoue M, Aonishi T. Frequency-dependent entrainment of spontaneous Ca transients in the dendritic tufts of CA1 pyramidal cells in rat hippocampal slice preparations by weak AC electric field. Brain Research Bulletin. PMID 31446086 DOI: 10.1016/j.brainresbull.2019.08.009  0.647
2018 Aonishi T, Mimura K, Okada M, Yamamoto Y. Statistical mechanics of CDMA multiuser detector implemented in coherent Ising machine Journal of Applied Physics. 124: 233102. DOI: 10.1063/1.5041998  0.437
2018 Aonishi T, Okada M, Mimura K, Yamamoto Y. Critical memory capacity of Hopfield model implemented in coherent Ising machine Journal of Applied Physics. 124: 152129. DOI: 10.1063/1.5041997  0.444
2017 Aonishi T, Mimura K, Utsunomiya S, Okada M, Yamamoto Y. Statistical Mechanics of Coherent Ising Machine — The Case of Ferromagnetic and Finite-Loading Hopfield Models — Journal of the Physical Society of Japan. 86: 104002. DOI: 10.7566/Jpsj.86.104002  0.453
2017 AONISHI T, MARUYAMA R, MIYAKAWA H. Automatic Cell Detection from Calcium Imaging Data Using Non-negative Matrix Factorization Seibutsu Butsuri. 57: 036-039. DOI: 10.2142/BIOPHYS.57.036  0.568
2015 Suzuki Y, Ikeda H, Miyamoto T, Miyakawa H, Seki Y, Aonishi T, Morimoto T. Noise-robust recognition of wide-field motion direction and the underlying neural mechanisms in Drosophila melanogaster. Scientific Reports. 5: 10253. PMID 25974721 DOI: 10.1038/Srep10253  0.726
2015 Maeda K, Maruyama R, Nagae T, Inoue M, Aonishi T, Miyakawa H. Weak sinusoidal electric fields entrain spontaneous Ca transients in the dendritic tufts of CA1 pyramidal cells in rat hippocampal slice preparations. Plos One. 10: e0122263. PMID 25811836 DOI: 10.1371/journal.pone.0122263  0.655
2015 Morinaga K, Miyata R, Aonishi T. Optimal colored noise for estimating phase response curves Journal of the Physical Society of Japan. 84. DOI: 10.7566/JPSJ.84.094801  0.3
2014 Ohashi S, Morimoto T, Suzuki Y, Miyakawa H, Aonishi T. A novel behavioral strategy, continuous biased running, during chemotaxis in Drosophila larvae. Neuroscience Letters. 570: 10-5. PMID 24747684 DOI: 10.1016/J.Neulet.2014.04.011  0.692
2014 Maruyama R, Maeda K, Moroda H, Kato I, Inoue M, Miyakawa H, Aonishi T. Detecting cells using non-negative matrix factorization on calcium imaging data. Neural Networks : the Official Journal of the International Neural Network Society. 55: 11-9. PMID 24705544 DOI: 10.1016/j.neunet.2014.03.007  0.609
2014 Suzuki Y, Morimoto T, Miyakawa H, Aonishi T. Cooperative integration and representation underlying bilateral network of fly motion-sensitive neurons. Plos One. 9: e85790. PMID 24465711 DOI: 10.1371/Journal.Pone.0085790  0.721
2013 Miyata R, Ota K, Aonishi T. Optimal design for hetero-associative memory: hippocampal CA1 phase response curve and spike-timing-dependent plasticity. Plos One. 8: e77395. PMID 24204822 DOI: 10.1371/Journal.Pone.0077395  0.516
2013 Miyata R, Ota K, Aonishi T. Optimal pair of hippocampal CA1 phase response curve and spike-timing-dependent plasticity for hetero-associative memory Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P9  0.509
2012 Kikuchi A, Ohashi S, Fuse N, Ohta T, Suzuki M, Suzuki Y, Fujita T, Miyamoto T, Aonishi T, Miyakawa H, Morimoto T. Experience-dependent plasticity of the optomotor response in Drosophila melanogaster. Developmental Neuroscience. 34: 533-42. PMID 23406844 DOI: 10.1159/000346266  0.709
2012 Monai H, Inoue M, Miyakawa H, Aonishi T. Low-frequency dielectric dispersion of brain tissue due to electrically long neurites. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 061911. PMID 23367980 DOI: 10.1103/Physreve.86.061911  0.757
2012 Ota K, Omori T, Miyakawa H, Okada M, Aonishi T. Higher-order spike triggered analysis of neural oscillators. Plos One. 7: e50232. PMID 23226249 DOI: 10.1371/Journal.Pone.0050232  0.748
2012 Kitazono J, Omori T, Aonishi T, Okada M. Estimating membrane resistance over dendrite using Markov random field Ipsj Online Transactions. 5: 186-191. DOI: 10.2197/ipsjtrans.5.186  0.455
2012 Castillo-Melendez M, Jenkin G, Wallace EM, Walker DW, Miller SL, Yawno T, Alexander ML, Hill CA, Rosenkrantz TS, Fitch RH, Tanaka C, Matsui M, Uematsu A, Noguchi K, Miyawaki T, ... ... Aonishi T, et al. Contents Vol. 34, 2012 Developmental Neuroscience. 34. DOI: 10.1159/000348888  0.667
2011 Ota K, Omori T, Watanabe S, Miyakawa H, Okada M, Aonishi T. Measurement of infinitesimal phase response curves from noisy real neurons. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 84: 041902. PMID 22181170 DOI: 10.1103/Physreve.84.041902  0.744
2011 Maeda K, Maruyama R, Inoue M, Aonishi T, Miyakawa H. Multi-cell recording of dendritic activities from population of CA1 pyramidal cells in acute hippocampal slices by use of Ca2+ imaging techniques Neuroscience Research. 71: e206. DOI: 10.1016/j.neures.2011.07.893  0.602
2011 Suzuki Y, Aonishi T, Miyakawa H, Morimoto T. The effects of noise in visual stimulus on motion detection in Drosophila melanogaster Neuroscience Research. 71: e92. DOI: 10.1016/J.Neures.2011.07.393  0.691
2011 Monai H, Ueta T, Miyakawa H, Aonishi T. Effects of passive membrane properties of dendrite on dielectric dispersion of neural tissues—Numerical experiment solving the extended cable equation including the effect of extracellular media Neuroscience Research. 71: e316. DOI: 10.1016/J.Neures.2011.07.1380  0.762
2011 Iida M, Omori T, Aonishi T, Okada M. Nonlinear effect on phase response curve of neuron model Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7064: 240-250. DOI: 10.1007/978-3-642-24965-5_26  0.439
2010 Omori T, Aonishi T, Okada M. Switch of encoding characteristics in single neurons by subthreshold and suprathreshold stimuli. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 021901. PMID 20365589 DOI: 10.1103/PhysRevE.81.021901  0.524
2010 Monai H, Omori T, Okada M, Inoue M, Miyakawa H, Aonishi T. An analytic solution of the cable equation predicts frequency preference of a passive shunt-end cylindrical cable in response to extracellular oscillating electric fields. Biophysical Journal. 98: 524-33. PMID 20159148 DOI: 10.1016/J.Bpj.2009.10.041  0.782
2010 Ota K, Omori T, Watanabe S, Miyakawa H, Okada M, Aonishi T. Identification of neural feature space from spike triggered covariance expressed as a function of PRC Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P14  0.745
2010 Tsunoda T, Omori T, Miyakawa H, Okada M, Aonishi T. Estimation of intracellular calcium ion concentration by nonlinear state space modeling and expectation-maximization algorithm for parameter estimation Journal of the Physical Society of Japan. 79. DOI: 10.1143/JPSJ.79.124801  0.657
2010 Aonishi T, Tsunoda T, Omori T, Okada M, Miyakawa H, Ota K. Bayesian method and dynamic clamp technique to measure neural phase-response curves Neuroscience Research. 68: e46. DOI: 10.1016/J.Neures.2010.07.448  0.697
2010 Miyakawa H, Inoue M, Aonishi T. Analysis of the impact of extracellular electric fields on hippocampal CA1 pyramidal neurons Neuroscience Research. 68: e12. DOI: 10.1016/j.neures.2010.07.288  0.612
2010 Tsunoda T, Omori T, Miyakawa H, Okada M, Aonishi T. Quantitative estimation of Ca2+ concentrations with simple state space model of calcium imaging signals Neuroscience Research. 68: e107. DOI: 10.1016/j.neures.2010.07.234  0.649
2010 Omori T, Aonishi T, Okada M. Estimation of non-uniform membrane properties over the dendrite: A statistical approach using data assimilation method Neuroscience Research. 68: e111. DOI: 10.1016/j.neures.2010.07.2058  0.365
2010 Ota K, Omori T, Watanabe S, Miyakawa H, Okada M, Aonishi T. Derivation of the neural feature space for oscillating neurons from spike triggered covariance Neuroscience Research. 68: e435. DOI: 10.1016/J.Neures.2010.07.1929  0.721
2010 Monai H, Aonishi T. An analytic solution of a passive shunt-end cable model reproduces large somatic volatge-clamp errors in central neurons Neuroscience Research. 68: e228. DOI: 10.1016/J.Neures.2010.07.1006  0.724
2009 Omori T, Aonishi T, Miyakawa H, Inoue M, Okada M. Steep decrease in the specific membrane resistance in the apical dendrites of hippocampal CA1 pyramidal neurons. Neuroscience Research. 64: 83-95. PMID 19428686 DOI: 10.1016/j.neures.2009.01.012  0.663
2009 Ota K, Omori T, Aonishi T. MAP estimation algorithm for phase response curves based on analysis of the observation process. Journal of Computational Neuroscience. 26: 185-202. PMID 18751879 DOI: 10.1007/S10827-008-0104-8  0.498
2009 Monai H, Omori T, Okada M, Inoue M, Miyakawa H, Aonishi T. An analytical solution of the cable equation predicts the frequency preference of a passive non-uniform cylindrical cable in response to extracellular oscillating electrical fields Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P38  0.768
2009 Ota K, Omori T, Watanabe S, Miyakawa H, Okada M, Aonishi T. Is the Langevin phase equation an efficient model for stochastic limit cycle oscillators in real neurons? Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P236  0.726
2009 Ota K, Tsunoda T, Omori T, Watanabe S, Miyakawa H, Okada M, Aonishi T. Is the Langevin phase equation an efficient model for oscillating neurons? Journal of Physics: Conference Series. 197. DOI: 10.1088/1742-6596/197/1/012016  0.713
2009 Monai H, Omori T, Okada M, Inoue M, Miyakawa H, Aonishi T. An analytical solution of the cable equation predicts frequency preference of a cylindrical cable in response to extracellular electrical fields Neuroscience Research. 65: S136. DOI: 10.1016/J.Neures.2009.09.668  0.765
2009 Tsunoda T, Omori T, Miyakawa H, Okada M, Aonishi T. Estimation of intracellular calcium ion concentration and Ca influx by nonlinear state space modeling Neuroscience Research. 65: S84. DOI: 10.1016/j.neures.2009.09.330  0.645
2009 Aoyama S, Omori T, Aonishi T, Inoue M, Miyakawa H. Morphology dependence of the membrane potential response of a branched neuron for extracellular electric field: a modeling study Neuroscience Research. 65: S74. DOI: 10.1016/j.neures.2009.09.262  0.651
2009 Aonishi T, Tsunoda T, Ota K, Omori T, Okada M, Miyakawa H. Fusion of real neuron and mathematical model by using dynamic clamp technique Asia Simulation Conference 2009, Jsst 2009.  0.581
2009 Omori T, Aonishi T, Miyakawa H, Inoue M, Okada M. Estimation of non-uniform membrane property over the dendrite: Data assimilation approach using bioimaging data and multi-compartment model Asia Simulation Conference 2009, Jsst 2009.  0.552
2007 Ota K, Aonishi T, Watanabe S, Miyakawa H, Omori T, Okada M. Perturbation response measurements in hippocampal CA1 pyramidal neuron based on Bayesian statistics Neuroscience Research. 58: S185. DOI: 10.1016/J.Neures.2007.06.810  0.729
2007 Omori T, Aonishi T, Okada M. Non-uniformity of membrane property improves dendritic signal transfer in hippocampal CA1 pyramidal neuron Neuroscience Research. 58: S40. DOI: 10.1016/j.neures.2007.06.235  0.434
2006 Omori T, Aonishi T, Miyakawa H, Inoue M, Okada M. Estimated distribution of specific membrane resistance in hippocampal CA1 pyramidal neuron. Brain Research. 1125: 199-208. PMID 17113056 DOI: 10.1016/j.brainres.2006.09.095  0.667
2006 Aonishi T, Ota K. Statistical estimation algorithm for phase response curves Journal of the Physical Society of Japan. 75. DOI: 10.1143/Jpsj.75.114802  0.505
2005 Aonishi T, Miyakawa H, Inoue M, Okada M. Sharing Models and Theories via NEURON Simulator: For Understanding the Dendrite The Brain & Neural Networks. 12: 100-106. DOI: 10.3902/JNNS.12.100  0.667
2005 Aonishi T, Miyakawa H, Inoue M, Okada M. Effect of dendritic backpropagating action potential on neural interaction Neurocomputing. 65: 343-348. DOI: 10.1016/j.neucom.2004.10.027  0.655
2003 Aonishi T, Okada M. Dynamically coupled oscillators: Cooperative behavior via dynamical interaction Journal of the Physical Society of Japan. 72: 1334-1337. DOI: 10.1143/JPSJ.72.1334  0.47
2002 Aonishi T, Kurata K, Okada M. Acceleration effect of coupled oscillator systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 046223. PMID 12005992 DOI: 10.1103/PhysRevE.65.046223  0.464
2002 Aonishi T, Okada M. Multibranch entrainment and slow evolution among branches in coupled oscillators. Physical Review Letters. 88: 024102. PMID 11801017 DOI: 10.1103/Physrevlett.88.024102  0.429
1999 Aonishi T, Kurata K, Okada M. Statistical Mechanics of an Oscillator Associative Memory with Scattered Natural Frequencies Physical Review Letters. 82: 2800-2803. DOI: 10.1103/PhysRevLett.82.2800  0.443
1998 Aonishi T, Kurata K, Mito T. A phase-locking theory of matching between rotated images by dynamic link matching Biological Cybernetics. 78: 253-264. DOI: 10.1007/S004220050431  0.308
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