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Lochana C. Menikarachchi, Ph.D. - Publications

Affiliations: 
2006-2011 Chemistry University of Connecticut, Storrs, CT, United States 
 2015- Pharmacy University of Peradeniya, Kandy, Sri Lanka 
Area:
proteins and biomaterials
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11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Menikarachchi LC, Dubey R, Hill DW, Brush DN, Grant DF. Development of Database Assisted Structure Identification (DASI) Methods for Nontargeted Metabolomics. Metabolites. 6. PMID 27258318 DOI: 10.3390/metabo6020017  0.48
2015 Hall LM, Hill DW, Menikarachchi LC, Chen MH, Hall LH, Grant DF. Optimizing artificial neural network models for metabolomics and systems biology: an example using HPLC retention index data. Bioanalysis. 7: 939-55. PMID 25966007 DOI: 10.4155/bio.15.1  0.424
2015 Paglia G, Angel P, Williams JP, Richardson K, Olivos HJ, Thompson JW, Menikarachchi L, Lai S, Walsh C, Moseley A, Plumb RS, Grant DF, Palsson BO, Langridge J, Geromanos S, et al. Ion mobility-derived collision cross section as an additional measure for lipid fingerprinting and identification. Analytical Chemistry. 87: 1137-44. PMID 25495617 DOI: 10.1021/Ac503715V  0.522
2014 Paglia G, Williams JP, Menikarachchi L, Thompson JW, Tyldesley-Worster R, Halldórsson S, Rolfsson O, Moseley A, Grant D, Langridge J, Palsson BO, Astarita G. Ion mobility derived collision cross sections to support metabolomics applications. Analytical Chemistry. 86: 3985-93. PMID 24640936 DOI: 10.1021/Ac500405X  0.524
2013 Menikarachchi LC, Hamdalla MA, Hill DW, Grant DF. Chemical structure identification in metabolomics: computational modeling of experimental features. Computational and Structural Biotechnology Journal. 5: e201302005. PMID 24688698 DOI: 10.5936/csbj.201302005  0.56
2013 Menikarachchi LC, Hill DW, Hamdalla MA, Mandoiu II, Grant DF. In silico enzymatic synthesis of a 400,000 compound biochemical database for nontargeted metabolomics. Journal of Chemical Information and Modeling. 53: 2483-92. PMID 23991755 DOI: 10.1021/Ci400368V  0.52
2012 Menikarachchi LC, Cawley S, Hill DW, Hall LM, Hall L, Lai S, Wilder J, Grant DF. MolFind: a software package enabling HPLC/MS-based identification of unknown chemical structures. Analytical Chemistry. 84: 9388-94. PMID 23039714 DOI: 10.1021/ac302048x  0.563
2011 Menikarachchi LC, Gascón JA. An extrapolation method for computing protein solvation energies based on density fragmentation of a graphical surface tessellation. Journal of Molecular Graphics & Modelling. 30: 38-45. PMID 21715202 DOI: 10.1016/j.jmgm.2011.06.001  0.486
2011 Beshir AB, Argueta CE, Menikarachchi LC, Gascón JA, Fenteany G. Locostatin Disrupts Association of Raf Kinase Inhibitor Protein With Binding Proteins by Modifying a Conserved Histidine Residue in the Ligand-Binding Pocket. Forum On Immunopathological Diseases and Therapeutics. 2: 47-58. PMID 21709760 DOI: 10.1615/Forumimmundisther.V2.I1.60  0.42
2010 Menikarachchi LC, Gascón JA. QM/MM approaches in medicinal chemistry research. Current Topics in Medicinal Chemistry. 10: 46-54. PMID 19929827 DOI: 10.2174/156802610790232297  0.482
2008 Menikarachchi LC, Gascón JA. Optimization of cutting schemes for the evaluation of molecular electrostatic potentials in proteins via Moving-Domain QM/MM. Journal of Molecular Modeling. 14: 479-87. PMID 18427844 DOI: 10.1007/s00894-008-0306-z  0.474
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