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Tsachy Weissman - Publications

Affiliations: 
Stanford University, Palo Alto, CA 
Area:
Electrical Engineering
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97 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Fischer-Hwang I, Ochoa I, Weissman T, Hernaez M. Denoising of Aligned Genomic Data. Scientific Reports. 9: 15067. PMID 31636330 DOI: 10.1038/S41598-019-51418-Z  0.329
2019 Jiao J, Han Y, Fischer-Hwang I, Weissman T. Estimating the Fundamental Limits is Easier Than Achieving the Fundamental Limits Ieee Transactions On Information Theory. 65: 6704-6715. DOI: 10.1109/Tit.2019.2927697  0.326
2018 Chandak S, Tatwawadi K, Ochoa I, Hernaez M, Weissman T. SPRING: A next-generation compressor for FASTQ data. Bioinformatics (Oxford, England). PMID 30535063 DOI: 10.1093/Bioinformatics/Bty1015  0.329
2018 Chandak S, Tatwawadi K, Weissman T, Birol I. Compression of genomic sequencing reads via hash-based reordering: algorithm and analysis. Bioinformatics (Oxford, England). 34: 558-567. PMID 29444237 DOI: 10.1093/Bioinformatics/Btx639  0.332
2018 Jiao J, Venkat K, Weissman T. Mutual Information, Relative Entropy and Estimation Error in Semi-Martingale Channels Ieee Transactions On Information Theory. 64: 6662-6671. DOI: 10.1109/Tit.2018.2829889  0.426
2018 Jiao J, Han Y, Weissman T. Generalizations of maximal inequalities to arbitrary selection rules Statistics & Probability Letters. 137: 19-25. DOI: 10.1016/J.Spl.2018.01.002  0.318
2017 Lee B, Moon T, Yoon S, Weissman T. DUDE-Seq: Fast, flexible, and robust denoising for targeted amplicon sequencing. Plos One. 12: e0181463. PMID 28749987 DOI: 10.1371/Journal.Pone.0181463  0.404
2017 Jiao J, Venkat K, Han Y, Weissman T. Maximum Likelihood Estimation of Functionals of Discrete Distributions Ieee Transactions On Information Theory. 63: 6774-6798. DOI: 10.1109/Tit.2017.2733537  0.324
2017 Jiao J, Venkat K, Weissman T. Relations Between Information and Estimation in Discrete-Time Lévy Channels Ieee Transactions On Information Theory. 63: 3579-3594. DOI: 10.1109/Tit.2017.2692211  0.411
2017 Xu R, Chen J, Weissman T, Zhang J. When is Noisy State Information at the Encoder as Useless as No Information or as Good as Noise-Free State? Ieee Transactions On Information Theory. 63: 960-974. DOI: 10.1109/Tit.2016.2631150  0.38
2016 Steiner F, Dempfle S, Ingber A, Weissman T. Compression for Quadratic Similarity Queries: Finite Blocklength and Practical Schemes. Ieee Transactions On Information Theory. 62: 2737-2747. PMID 29398721 DOI: 10.1109/Tit.2016.2535172  0.416
2016 No A, Weissman T. Rateless Lossy Compression via the Extremes. Ieee Transactions On Information Theory. 62: 5484-5495. PMID 29375154 DOI: 10.1109/Tit.2016.2598148  0.424
2016 Tatwawadi K, Hernaez M, Ochoa I, Weissman T. GTRAC: fast retrieval from compressed collections of genomic variants. Bioinformatics (Oxford, England). 32: i479-i486. PMID 27587665 DOI: 10.7490/F1000Research.1113054.1  0.326
2016 Ochoa I, Hernaez M, Goldfeder R, Weissman T, Ashley E. Effect of lossy compression of quality scores on variant calling. Briefings in Bioinformatics. PMID 26966283 DOI: 10.1093/Bib/Bbw011  0.35
2016 Venkat K, Weissman T, Carmon Y, Shamai S. Information, Estimation, and Lookahead in the Gaussian Channel Ieee Transactions On Signal Processing. 64: 3605-3618. DOI: 10.1109/Tsp.2016.2544748  0.439
2016 No A, Ingber A, Weissman T. Strong Successive Refinability and Rate-Distortion-Complexity Tradeoff Ieee Transactions On Information Theory. 62: 3618-3635. DOI: 10.1109/Tit.2016.2549540  0.407
2016 Kipnis A, Goldsmith AJ, Eldar YC, Weissman T. Distortion Rate Function of Sub-Nyquist Sampled Gaussian Sources Ieee Transactions On Information Theory. 62: 401-429. DOI: 10.1109/Tit.2015.2485271  0.359
2015 Asnani H, Shomorony I, Avestimehr AS, Weissman T. Network Compression: Worst Case Analysis. Ieee Transactions On Information Theory. 61: 3980-3995. PMID 29375153 DOI: 10.1109/Tit.2015.2434829  0.368
2015 Jiao J, Venkat K, Han Y, Weissman T. Minimax Estimation of Functionals of Discrete Distributions. Ieee Transactions On Information Theory. 61: 2835-2885. PMID 29375152 DOI: 10.1109/Tit.2015.2412945  0.327
2015 Ingber A, Courtade T, Weissman T. Compression for Quadratic Similarity Queries. Ieee Transactions On Information Theory. 61: 2729-2747. PMID 29375151 DOI: 10.1109/Tit.2015.2402972  0.435
2015 Ingber A, Weissman T. Compression for Similarity Identification: Computing the Error Exponent. Proceedings. Data Compression Conference. 2015: 413-422. PMID 29046895 DOI: 10.1109/DCC.2015.75  0.339
2015 Deorowicz S, Grabowski S, Ochoa I, Hernaez M, Weissman T. Comment on: 'ERGC: an efficient referential genome compression algorithm'. Bioinformatics (Oxford, England). PMID 26615213 DOI: 10.1093/Bioinformatics/Btv704  0.313
2015 Wang Z, Weissman T, Milenkovic O. smallWig: Parallel Compression of RNA-seq WIG Files. Bioinformatics (Oxford, England). PMID 26424856 DOI: 10.1093/Bioinformatics/Btv561  0.358
2015 Malysa G, Hernaez M, Ochoa I, Rao M, Ganesan K, Weissman T. QVZ: lossy compression of quality values. Bioinformatics (Oxford, England). PMID 26026138 DOI: 10.1093/Bioinformatics/Btv330  0.336
2015 Ochoa I, Hernaez M, Weissman T. iDoComp: a compression scheme for assembled genomes. Bioinformatics (Oxford, England). 31: 626-33. PMID 25344501 DOI: 10.1093/Bioinformatics/Btu698  0.362
2015 Jiao J, Courtade TA, Venkat K, Weissman T. Justification of Logarithmic Loss via the Benefit of Side Information Ieee Transactions On Information Theory. 61: 5357-5365. DOI: 10.1109/Tit.2015.2462848  0.316
2015 Carmon Y, Shamai S, Weissman T. Comparison of the Achievable Rates in OFDM and Single Carrier Modulation with I.I.D. Inputs Ieee Transactions On Information Theory. 61: 1795-1818. DOI: 10.1109/Tit.2015.2403354  0.443
2015 Ingber A, Courtade T, Weissman T. Compression for Quadratic Similarity Queries Ieee Transactions On Information Theory. 61: 2729-2747. DOI: 10.1109/TIT.2015.2402972  0.335
2014 Ochoa I, Hernaez M, Weissman T. Aligned genomic data compression via improved modeling. Journal of Bioinformatics and Computational Biology. 12: 1442002. PMID 25395305 DOI: 10.1142/S0219720014420025  0.372
2014 Jiao J, Courtade TA, No A, Venkat K, Weissman T. Information measures: The curious case of the binary alphabet Ieee Transactions On Information Theory. 60: 7616-7626. DOI: 10.1109/Tit.2014.2360184  0.353
2014 Permuter HH, Asnani H, Weissman T. Capacity of a POST Channel With and Without Feedback Ieee Transactions On Information Theory. 60: 6041-6057. DOI: 10.1109/Tit.2014.2343232  0.36
2014 Asnani H, Permuter HH, Weissman T. To Feed or Not to Feedback Ieee Transactions On Information Theory. 60: 5150-5172. DOI: 10.1109/Tit.2014.2331957  0.503
2014 No A, Weissman T. Minimax Filtering Regret via Relations Between Information and Estimation Ieee Transactions On Information Theory. 60: 4832-4847. DOI: 10.1109/Tit.2014.2323069  0.381
2014 Misra V, Weissman T. The porosity of additive noise channels Ieee Transactions On Information Theory. 60: 3144-3162. DOI: 10.1109/Tit.2014.2313578  0.465
2014 Zhao L, Chia Y, Weissman T. Compression With Actions Ieee Transactions On Information Theory. 60: 796-807. DOI: 10.1109/Tit.2013.2293339  0.449
2014 Courtade TA, Weissman T. Multiterminal source coding under logarithmic loss Ieee Transactions On Information Theory. 60: 740-761. DOI: 10.1109/Tit.2013.2288257  0.379
2014 Dempfle S, Steiner F, Ingber A, Weissman T. Compression for quadratic similarity queries via shape-gain quantizers Ieee International Symposium On Information Theory - Proceedings. 2839-2843. DOI: 10.1109/ISIT.2014.6875352  0.301
2013 Ochoa I, Asnani H, Bharadia D, Chowdhury M, Weissman T, Yona G. QualComp: a new lossy compressor for quality scores based on rate distortion theory. Bmc Bioinformatics. 14: 187. PMID 23758828 DOI: 10.1186/1471-2105-14-187  0.349
2013 Mirghaderi R, Goldsmith A, Weissman T. Achievable Error Exponents in the Gaussian Channel With Rate-Limited Feedback Ieee Transactions On Information Theory. 59: 8144-8156. DOI: 10.1109/Tit.2013.2280918  0.373
2013 Chia Y, Soundararajan R, Weissman T. Estimation With a Helper Who Knows the Interference Ieee Transactions On Information Theory. 59: 7097-7117. DOI: 10.1109/Tit.2013.2273531  0.428
2013 Jiao J, Permuter HH, Zhao L, Kim Y, Weissman T. Universal Estimation of Directed Information Ieee Transactions On Information Theory. 59: 6220-6242. DOI: 10.1109/Tit.2013.2267934  0.36
2013 Asnani H, Permuter HH, Weissman T. Successive Refinement With Decoder Cooperation and Its Channel Coding Duals Ieee Transactions On Information Theory. 59: 5511-5533. DOI: 10.1109/Tit.2013.2266655  0.425
2013 Chia Y, Asnani H, Weissman T. Multiterminal Source Coding With Action-Dependent Side Information Ieee Transactions On Information Theory. 59: 3653-3667. DOI: 10.1109/Tit.2013.2245398  0.385
2013 Asnani H, Weissman T. Real-Time Coding With Limited Lookahead Ieee Transactions On Information Theory. 59: 3582-3606. DOI: 10.1109/Tit.2013.2245396  0.413
2013 Weissman T, Kim Y, Permuter HH. Directed Information, Causal Estimation, and Communication in Continuous Time Ieee Transactions On Information Theory. 59: 1271-1287. DOI: 10.1109/Tit.2012.2227677  0.409
2013 Ingber A, Courtade T, Weissman T. Quadratic similarity queries on compressed data Data Compression Conference Proceedings. 441-450. DOI: 10.1109/DCC.2013.52  0.326
2012 Gupta A, Verdú S, Weissman T. Achievable complexity-performance tradeoffs in lossy compression Problems of Information Transmission. 48: 352-375. DOI: 10.1134/S0032946012040060  0.303
2012 Baron D, Weissman T. An MCMC approach to universal lossy compression of analog sources Ieee Transactions On Signal Processing. 60: 5230-5240. DOI: 10.1109/Tsp.2012.2206585  0.354
2012 Jalali S, Weissman T. Denoising via MCMC-based lossy compression Ieee Transactions On Signal Processing. 60: 3092-3100. DOI: 10.1109/Tsp.2012.2190597  0.377
2012 Venkat K, Weissman T. Pointwise Relations Between Information and Estimation in Gaussian Noise Ieee Transactions On Information Theory. 58: 6264-6281. DOI: 10.1109/Tit.2012.2206794  0.402
2012 Permuter HH, Weissman T. Cascade and Triangular Source Coding With Side Information at the First Two Nodes Ieee Transactions On Information Theory. 58: 3339-3349. DOI: 10.1109/Tit.2012.2188273  0.378
2012 Jalali S, Montanari A, Weissman T. Lossy Compression of Discrete Sources via the Viterbi Algorithm Ieee Transactions On Information Theory. 58: 2475-2489. DOI: 10.1109/Tit.2011.2178059  0.385
2012 Atar R, Weissman T. Mutual Information, Relative Entropy, and Estimation in the Poisson Channel Ieee Transactions On Information Theory. 58: 1302-1318. DOI: 10.1109/Tit.2011.2172572  0.394
2012 Chia Y, Permuter HH, Weissman T. Cascade, Triangular, and Two-Way Source Coding With Degraded Side Information at the Second User Ieee Transactions On Information Theory. 58: 189-206. DOI: 10.1109/Tit.2011.2167738  0.333
2012 Jalali S, Weissman T. Block and sliding-block lossy compression via MCMC Ieee Transactions On Communications. 60: 2187-2198. DOI: 10.1109/Tcomm.2012.061412.110194  0.402
2011 Asnani H, Permuter H, Weissman T. Probing Capacity Ieee Transactions On Information Theory. 57: 7317-7332. DOI: 10.1109/Tit.2011.2162089  0.404
2011 Permuter H, Weissman T. Source Coding With a Side Information “Vending Machine” Ieee Transactions On Information Theory. 57: 4530-4544. DOI: 10.1109/Tit.2011.2145510  0.374
2011 Permuter HH, Kim Y, Weissman T. Interpretations of Directed Information in Portfolio Theory, Data Compression, and Hypothesis Testing Ieee Transactions On Information Theory. 57: 3248-3259. DOI: 10.1109/Tit.2011.2136270  0.339
2011 Kim Y, Lapidoth A, Weissman T. Error Exponents for the Gaussian Channel With Active Noisy Feedback Ieee Transactions On Information Theory. 57: 1223-1236. DOI: 10.1109/Tit.2011.2104991  0.422
2010 Weissman T. Capacity of Channels With Action-Dependent States Ieee Transactions On Information Theory. 56: 5396-5411. DOI: 10.1109/Tit.2010.2068991  0.406
2010 Weissman T. The Relationship Between Causal and Noncausal Mismatched Estimation in Continuous-Time AWGN Channels Ieee Transactions On Information Theory. 56: 4256-4273. DOI: 10.1109/Tit.2010.2054430  0.422
2010 Chen J, Permuter H, Weissman T. Tighter Bounds on the Capacity of Finite-State Channels Via Markov Set-Chains Ieee Transactions On Information Theory. 56: 3660-3691. DOI: 10.1109/Tit.2010.2050825  0.379
2010 Permuter HH, Steinberg Y, Weissman T. Two-Way Source Coding With a Helper Ieee Transactions On Information Theory. 56: 2905-2919. DOI: 10.1109/Tit.2010.2046238  0.358
2010 Jalali S, Verdú S, Weissman T. A universal scheme for wynerziv coding of discrete sources Ieee Transactions On Information Theory. 56: 1737-1750. DOI: 10.1109/Tit.2010.2040889  0.394
2009 Sivaramakrishnan K, Weissman T. A context quantization approach to universal denoising Ieee Transactions On Signal Processing. 57: 2110-2129. DOI: 10.1109/Tsp.2008.2011847  0.711
2009 Moon T, Weissman T. Universal FIR MMSE Filtering Ieee Transactions On Signal Processing. 57: 1068-1083. DOI: 10.1109/Tsp.2008.20098940  0.344
2009 Moon T, Weissman T. Discrete Denoising With Shifts Ieee Transactions On Information Theory. 55: 5284-5301. DOI: 10.1109/Tit.2009.2030461  0.367
2009 Permuter HH, Weissman T, Chen J. Capacity Region of the Finite-State Multiple-Access Channel With and Without Feedback Ieee Transactions On Information Theory. 55: 2455-2477. DOI: 10.1109/Tit.2009.2018346  0.405
2009 Permuter HH, Weissman T, Goldsmith AJ. Finite State Channels With Time-Invariant Deterministic Feedback Ieee Transactions On Information Theory. 55: 644-662. DOI: 10.1109/Tit.2008.2009849  0.449
2008 Verdú S, Weissman T. The information lost in erasures Ieee Transactions On Information Theory. 54: 5030-5058. DOI: 10.1109/Tit.2008.929968  0.45
2008 Martins NC, Weissman T. Coding for Additive White Noise Channels With Feedback Corrupted by Quantization or Bounded Noise Ieee Transactions On Information Theory. 54: 4274-4282. DOI: 10.1109/Tit.2008.928289  0.463
2008 Weissman T. How to Filter an “Individual Sequence With Feedback” Ieee Transactions On Information Theory. 54: 3831-3841. DOI: 10.1109/Tit.2008.926457  0.425
2008 Permuter H, Cuff P, Van Roy B, Weissman T. Capacity of the trapdoor channel with feedback Ieee Transactions On Information Theory. 54: 3150-3165. DOI: 10.1109/Tit.2008.924681  0.379
2008 Sivaramakrishnan K, Weissman T. Universal denoising of discrete-time continuous-amplitude signals Ieee Transactions On Information Theory. 54: 5632-5660. DOI: 10.1109/Tit.2008.2006438  0.707
2008 Taesup M, Weissman T. Universal Filtering Via Hidden Markov Modeling Ieee Transactions On Information Theory. 54: 692-708. DOI: 10.1109/Tit.2007.913220  0.38
2008 Jalali S, Weissman T. Lossy source coding via Markov chain Monte Carlo International Zurich Seminar On Digital Communications. 80-83. DOI: 10.1109/IZS.2008.4497281  0.304
2008 Jalali S, Weissman T. Rate-distortion via markov chain monte carlo Ieee International Symposium On Information Theory - Proceedings. 852-856. DOI: 10.1109/ISIT.2008.4595107  0.319
2008 Jalali S, Weissman T. Near optimal lossy source coding and compression-based denoising via markov chain Monte Carlo Ciss 2008, the 42nd Annual Conference On Information Sciences and Systems. 441-446. DOI: 10.1109/CISS.2008.4558567  0.318
2007 Cohen A, Merhav N, Weissman T. Scanning and Sequential Decision Making for Multidimensional Data–Part I: The Noiseless Case Ieee Transactions On Information Theory. 53: 3001-3020. DOI: 10.1109/Tit.2008.2006378  0.38
2007 Weissman T, Ordentlich E, Weinberger MJ, Somekh-Baruch A, Merhav N. Universal Filtering Via Prediction Ieee Transactions On Information Theory. 53: 1253-1264. DOI: 10.1109/Tit.2007.892782  0.34
2007 Pereira S, Weissman T. Denoising and Filtering Under the Probability of Excess Loss Criterion Ieee Transactions On Information Theory. 53: 1265-1281. DOI: 10.1109/Tit.2007.892772  0.401
2007 Jalali S, Verdú S, Weissman T. A universal Wyner-Ziv scheme for discrete sources Ieee International Symposium On Information Theory - Proceedings. 1951-1955. DOI: 10.1109/ISIT.2007.4557154  0.311
2006 Gemelos GM, Sigurjonsson S, Weissman T. Algorithms for discrete denoising under channel uncertainty Ieee Transactions On Signal Processing. 54: 2263-2276. DOI: 10.1109/Tsp.2006.874295  0.461
2006 Matloub S, Weissman T. Universal Zero-Delay Joint Source–Channel Coding Ieee Transactions On Information Theory. 52: 5240-5250. DOI: 10.1109/Tit.2006.885537  0.469
2006 Weissman T, El Gamal A. Source coding with limited-look-ahead side information at the decoder Ieee Transactions On Information Theory. 52: 5218-5239. DOI: 10.1109/Tit.2006.885500  0.389
2006 Merhav N, Weissman T. Coding for the Feedback Gel'fand–Pinsker Channel and the Feedforward Wyner–Ziv Source Ieee Transactions On Information Theory. 52: 4207-4211. DOI: 10.1109/Tit.2006.880040  0.475
2006 Gemelos GM, Sigurjonsson S, Weissman T. Universal Minimax Discrete Denoising Under Channel Uncertainty Ieee Transactions On Information Theory. 52: 3476-3497. DOI: 10.1109/Tit.2006.878234  0.461
2006 Ordentlich E, Weissman T. On the optimality of symbol-by-symbol filtering and denoising Ieee Transactions On Information Theory. 52: 19-40. DOI: 10.1109/Tit.2005.860432  0.369
2006 Verdú S, Weissman T. Erasure entropy Ieee International Symposium On Information Theory - Proceedings. 98-102. DOI: 10.1109/ISIT.2006.261682  0.315
2005 Zhang R, Weissman T. Discrete Denoising For Channels With Memory Communications in Information and Systems. 5: 257-288. DOI: 10.4310/Cis.2005.V5.N2.A5  0.459
2005 Weissman T, Merhav N. On causal source codes with side information Ieee Transactions On Information Theory. 51: 4003-4013. DOI: 10.1109/Tit.2005.856978  0.411
2005 Dembo A, Weissman T. Universal denoising for the finite-input general-output channel Ieee Transactions On Information Theory. 51: 1507-1517. DOI: 10.1109/Tit.2005.844104  0.488
2004 Weissman T, Merhav N. Universal prediction of random binary sequences in a noisy environment Annals of Applied Probability. 14: 54-89. DOI: 10.1214/Aoap/1075828047  0.314
2003 Dembo A, Weissman T. The Minimax Distortion Redundancy in Noisy Source Coding Ieee Transactions On Information Theory. 49: 3020-3030. DOI: 10.1109/TIT.2003.819336  0.332
2002 Weissman T, Merhav N. Tradeoffs between the excess-code-length exponent and the excess-distortion exponent in lossy source coding Ieee Transactions On Information Theory. 48: 396-415. DOI: 10.1109/18.978747  0.436
2001 Weissman T, Merhav N. Universal prediction of individual binary sequences in the presence of noise Ieee Transactions On Information Theory. 47: 2151-2173. DOI: 10.1109/18.945240  0.414
2001 Weissman T, Merhav N, Somekh-Baruch A. Twofold universal prediction schemes for achieving the finite-state predictability of a noisy individual binary sequence Ieee Transactions On Information Theory. 47: 1849-1866. DOI: 10.1109/18.930923  0.41
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