| Year |
Citation |
Score |
| 2023 |
Rivas E. RNA covariation at helix-level resolution for the identification of evolutionarily conserved RNA structure. Plos Computational Biology. 19: e1011262. PMID 37450549 DOI: 10.1371/journal.pcbi.1011262 |
0.308 |
|
| 2023 |
Rivas E. RNA covariation at helix-level resolution for the identification of evolutionarily conserved RNA structure. Biorxiv : the Preprint Server For Biology. PMID 37131783 DOI: 10.1101/2023.04.14.536965 |
0.308 |
|
| 2022 |
Gao W, Yang A, Rivas E. Thirteen dubious ways to detect conserved structural RNAs. Iubmb Life. PMID 36495545 DOI: 10.1002/iub.2694 |
0.317 |
|
| 2021 |
Gao W, Jones TA, Rivas E. Discovery of 17 conserved structural RNAs in fungi. Nucleic Acids Research. PMID 34086938 DOI: 10.1093/nar/gkab355 |
0.312 |
|
| 2021 |
Rivas E. Evolutionary conservation of RNA sequence and structure. Wiley Interdisciplinary Reviews. Rna. 12: e1649. PMID 33754485 DOI: 10.1002/wrna.1649 |
0.303 |
|
| 2020 |
Rivas E, Clements J, Eddy SR. Estimating the power of sequence covariation for detecting conserved RNA structure. Bioinformatics (Oxford, England). PMID 32031582 DOI: 10.1093/Bioinformatics/Btaa080 |
0.379 |
|
| 2019 |
Sweeney BA, Petrov AI, Burkov B, Finn RD, Bateman A, Szymanski M, Karlowski WM, Gorodkin J, Seemann SE, Cannone JJ, Gutell RR, Fey P, Basu S, Kay S, Cochrane G, ... ... Rivas E, et al. RNAcentral: a hub of information for non-coding RNA sequences Nucleic Acids Research. 47. PMID 30395267 DOI: 10.1093/Nar/Gky1034 |
0.351 |
|
| 2017 |
Kalvari I, Argasinska J, Quinones-Olvera N, Nawrocki EP, Rivas E, Eddy SR, Bateman A, Finn RD, Petrov AI. Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families. Nucleic Acids Research. PMID 29112718 DOI: 10.1093/Nar/Gkx1038 |
0.327 |
|
| 2017 |
Rivas E, Clements J, Eddy SR. A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs. Nature Methods. 14: 45-48. PMID 27819659 DOI: 10.1038/Nmeth.4066 |
0.384 |
|
| 2015 |
Rivas E, Eddy SR. Parameterizing sequence alignment with an explicit evolutionary model. Bmc Bioinformatics. 16: 406. PMID 26652060 DOI: 10.1186/S12859-015-0832-5 |
0.332 |
|
| 2013 |
Rivas E. The four ingredients of single-sequence RNA secondary structure prediction. A unifying perspective. Rna Biology. 10: 1185-96. PMID 23695796 DOI: 10.4161/Rna.24971 |
0.397 |
|
| 2012 |
Rivas E, Lang R, Eddy SR. A range of complex probabilistic models for RNA secondary structure prediction that includes the nearest-neighbor model and more. Rna (New York, N.Y.). 18: 193-212. PMID 22194308 DOI: 10.1261/Rna.030049.111 |
0.421 |
|
| 2008 |
Rivas E, Eddy SR. Probabilistic phylogenetic inference with insertions and deletions. Plos Computational Biology. 4: e1000172. PMID 18787703 DOI: 10.1371/Journal.Pcbi.1000172 |
0.377 |
|
| 2007 |
del Val C, Rivas E, Torres-Quesada O, Toro N, Jiménez-Zurdo JI. Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics. Molecular Microbiology. 66: 1080-91. PMID 17971083 DOI: 10.1111/J.1365-2958.2007.05978.X |
0.351 |
|
| 2005 |
Rivas E. Evolutionary models for insertions and deletions in a probabilistic modeling framework. Bmc Bioinformatics. 6: 63. PMID 15780137 DOI: 10.1186/1471-2105-6-63 |
0.376 |
|
| 2001 |
Rivas E, Eddy SR. Noncoding RNA gene detection using comparative sequence analysis Bmc Bioinformatics. 2. PMID 11801179 DOI: 10.1186/1471-2105-2-8 |
0.357 |
|
| 2001 |
Rivas E, Klein RJ, Jones TA, Eddy SR. Computational identification of noncoding RNAs in E. coli by comparative genomics Current Biology. 11: 1369-1373. PMID 11553332 DOI: 10.1016/S0960-9822(01)00401-8 |
0.38 |
|
| 2000 |
Rivas E, Eddy SR. Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs Bioinformatics. 16: 583-605. PMID 11038329 DOI: 10.1093/Bioinformatics/16.7.583 |
0.386 |
|
| 2000 |
Rivas E, Eddy SR. The language of RNA: A formal grammar that includes pseudoknots Bioinformatics. 16: 334-340. PMID 10869031 DOI: 10.1093/Bioinformatics/16.4.334 |
0.366 |
|
| 1999 |
Rivas E, Eddy SR. A dynamic programming algorithm for RNA structure prediction including pseudoknots Journal of Molecular Biology. 285: 2053-2068. PMID 9925784 DOI: 10.1006/Jmbi.1998.2436 |
0.365 |
|
| 1996 |
Cortés JL, Rivas E, Velázquez L. Extended dualization: A method for the bosonization of anomalous fermion systems in arbitrary dimension. Physical Review D. 53: 5952-5965. PMID 10019883 DOI: 10.1103/Physrevd.53.5952 |
0.398 |
|
| 1994 |
Alonso JL, Boucaud P, Lesmes F, Rivas E. Phase diagram of a lattice SU(2) × SU(2) scalar-fermion model using the Zaragoza fermions Arxiv: High Energy Physics - Lattice. 34: 650-652. DOI: 10.1016/0920-5632(94)90473-1 |
0.374 |
|
| 1994 |
Alonso JL, Lesmes F, Rivas E, Boucaud P. Phase diagrams of an SU(2) × SU(2) scalar-fermion model with massless decoupled doublers Physics Letters B. 329: 75-80. DOI: 10.1016/0370-2693(94)90519-3 |
0.348 |
|
| 1993 |
Alonso J, Boucaud P, Cortés J, Lesmes F, Rivas E. The S, U and Δϱ parameters in the Zaragoza proposal for lattice chiral gauge fermions Nuclear Physics. 407: 373-384. DOI: 10.1016/0550-3213(93)90063-U |
0.333 |
|
| 1993 |
Golterman MFL, Petcher DN, Rivas E. Absence of Chiral Fermions in the Eichten--Preskill Model Nuclear Physics. 395: 596-622. DOI: 10.1016/0550-3213(93)90049-U |
0.408 |
|
| 1992 |
Alonso JL, Cortés JL, Lesmes F, Boucaud P, Rivas E. Massless decoupled doublers: Chiral Yukawa models and chiral gauge theories☆ Arxiv: High Energy Physics - Lattice. 29: 171-181. DOI: 10.1016/0920-5632(92)90018-N |
0.384 |
|
| 1992 |
Golterman MFL, Petcher DN, Rivas E. The large Wilson-Yukawa coupling expansion Nuclear Physics. 377: 405-423. DOI: 10.1016/0550-3213(92)90029-B |
0.349 |
|
| 1991 |
Alonso JL, Boucaud P, Cortés JL, Rivas E. Chiral Yukawa models on the lattice and decoupling. Physical Review D. 44: 3258-3263. PMID 10013782 DOI: 10.1103/Physrevd.44.3258 |
0.398 |
|
| 1990 |
Alonso J, Cortés J, Rivas E. Fermion Functional Integral and the Chiral Schwinger Model Physical Review D. 41: 2568-2572. PMID 10012644 DOI: 10.1103/Physrevd.41.2568 |
0.399 |
|
| 1990 |
Alonso JL, Cortés JL, Rivas E. Weyl Fermion Functional Integral And Two-Dimensional Gauge Theories International Journal of Modern Physics A. 5: 2839-2851. DOI: 10.1142/S0217751X90001331 |
0.336 |
|
| 1990 |
Alonso JL, Cortès J-, Rivas E, Bovcaud P. A Lattice Global Chiral Invariant Regularization Of The Chiral Schwinger Model Modern Physics Letters A. 5: 275-280. DOI: 10.1142/S0217732390000329 |
0.38 |
|
| 1990 |
Alonso J-, Boucaud P, Cortes J-, Rivas E. Lorentz non-covariance of lattice chiral gauge theories☆ Physics Letters B. 237: 476-480. DOI: 10.1016/0370-2693(90)91210-3 |
0.358 |
|
| 1989 |
Alonso JL, Boucaud P, Cortès JL, Rivas E. Global chiral-invariant formulation of lattice gauge theory. Physical Review D. 40: 4123-4129. PMID 10011798 DOI: 10.1103/Physrevd.40.4123 |
0.363 |
|
| 1988 |
Alonso JL, Boucaud P, Cortès JL, Rivas E. A chiral invariant decoupling of replica lattice fermions Physics Letters B. 201: 340-344. DOI: 10.1016/0370-2693(88)91152-5 |
0.381 |
|
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