Maria I. Klapa - Publications

Affiliations: 
Chemical Engineering University of Maryland, College Park, College Park, MD 
Area:
Chemical Engineering, Bioinformatics Biology

36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Manolaki P, Tooulakou G, Byberg CU, Eller F, Sorrell BK, Klapa MI, Riis T. Probing the Response of the Amphibious Plant to Nutrient Enrichment and Shading by Integrating Eco-Physiological With Metabolomic Analyses. Frontiers in Plant Science. 11: 581787. PMID 33391296 DOI: 10.3389/fpls.2020.581787  0.363
2019 Henriksson HE, Malavaki C, Bränn E, Drainas V, Lager S, Iliadis SI, Papadopoulos FC, Sundström Poromaa I, Chrousos GP, Klapa MI, Skalkidou A. Blood plasma metabolic profiling of pregnant women with antenatal depressive symptoms. Translational Psychiatry. 9: 204. PMID 31444321 DOI: 10.1038/S41398-019-0546-Y  0.31
2018 Tooulakou G, Nikolopoulos D, Dotsika E, Orkoula MG, Kontoyannis CG, Liakopoulos G, Klapa MI, Karabourniotis G. Changes in size and composition of pigweed (Amaranthus hybridus L.) calcium oxalate crystals under CO starvation conditions. Physiologia Plantarum. PMID 30238994 DOI: 10.1111/Ppl.12843  0.325
2018 Papadimitropoulos MP, Vasilopoulou CG, Maga-Nteve C, Klapa MI. Untargeted GC-MS Metabolomics. Methods in Molecular Biology (Clifton, N.J.). 1738: 133-147. PMID 29654587 DOI: 10.1007/978-1-4939-7643-0_9  0.424
2018 Tsolis KC, Tsare EP, Orfanoudaki G, Busche T, Kanaki K, Ramakrishnan R, Rousseau F, Schymkowitz J, Rückert C, Kalinowski J, Anné J, Karamanou S, Klapa MI, Economou A. Comprehensive subcellular topologies of polypeptides in Streptomyces. Microbial Cell Factories. 17: 43. PMID 29544487 DOI: 10.1186/S12934-018-0892-0  0.346
2017 van Rijswijk M, Beirnaert C, Caron C, Cascante M, Dominguez V, Dunn WB, Ebbels TMD, Giacomoni F, Gonzalez-Beltran A, Hankemeier T, Haug K, Izquierdo-Garcia JL, Jimenez RC, Jourdan F, Kale N, ... Klapa MI, et al. The future of metabolomics in ELIXIR. F1000research. 6. PMID 29043062 DOI: 10.12688/F1000Research.12342.2  0.317
2016 Maga-Nteve C, Vasilopoulou CG, Constantinou C, Margarity M, Klapa MI. Sex-comparative study of mouse cerebellum physiology under adult-onset hypothyroidism: The significance of GC-MS metabolomic data normalization in meta-analysis. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1041: 158-166. PMID 28040659 DOI: 10.1016/J.Jchromb.2016.12.016  0.387
2016 Tooulakou G, Giannopoulos A, Nikolopoulos D, Bresta P, Dotsika E, Orkoula MG, Kontoyannis CG, Fasseas C, Liakopoulos G, Klapa MI, Karabourniotis G. Reevaluation of the plant "gemstones": Calcium oxalate crystals sustain photosynthesis under drought conditions. Plant Signaling & Behavior. 0. PMID 27471886 DOI: 10.1080/15592324.2016.1215793  0.314
2016 Tooulakou G, Giannopoulos A, Nikolopoulos D, Bresta P, Dotsika E, Orkoula MG, Kontoyiannis CG, Fasseas C, Liakopoulos G, Klapa MI, Karabourniotis G. "Alarm photosynthesis": calcium oxalate crystals as an internal CO2 source in plants. Plant Physiology. PMID 27261065 DOI: 10.1104/Pp.16.00111  0.342
2016 Vasilopoulou CG, Margarity M, Klapa MI. Metabolomic Analysis in Brain Research: Opportunities and Challenges. Frontiers in Physiology. 7: 183. PMID 27252656 DOI: 10.3389/Fphys.2016.00183  0.417
2016 Maga-Nteve C, Klapa MI. Streamlining GC-MS metabolomic analysis using the M-IOLITE software suite Ifac-Papersonline. 49: 286-288. DOI: 10.1016/J.Ifacol.2016.12.140  0.466
2016 Vasilopoulou CG, Margarity M, Klapa MI. Metabolomics and Network Biology: sex comparative analysis of mouse brain regional metabolic physiology Ifac-Papersonline. 49: 283-285. DOI: 10.1016/J.Ifacol.2016.12.139  0.373
2015 Papadimitropoulos MEP, Klapa MI. Investigating the effect of elevated CO2 in the growth environment of salt-stressed plants using integrated omic analyses Combined Stresses in Plants: Physiological, Molecular, and Biochemical Aspects. 49-69. DOI: 10.1007/978-3-319-07899-1_3  0.364
2013 Vernardis SI, Goudar CT, Klapa MI. Metabolic profiling reveals that time related physiological changes in mammalian cell perfusion cultures are bioreactor scale independent. Metabolic Engineering. 19: 1-9. PMID 23680586 DOI: 10.1016/J.Ymben.2013.04.005  0.405
2013 Vernardis SI, Goudar CT, Klapa MI. Metabolomics and network biology for sensitive monitoring of how growth environment changes affect the physiology of industrial-scale perfusion cultures Ifac Proceedings Volumes (Ifac-Papersonline). 12: 227-232. DOI: 10.3182/20131216-3-In-2044.00056  0.423
2011 Spagou K, Theodoridis G, Wilson I, Raikos N, Greaves P, Edwards R, Nolan B, Klapa MI. A GC-MS metabolic profiling study of plasma samples from mice on low- and high-fat diets. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 879: 1467-75. PMID 21388899 DOI: 10.1016/J.Jchromb.2011.01.028  0.462
2011 Constantinou C, Chrysanthopoulos PK, Margarity M, Klapa MI. GC-MS metabolomic analysis reveals significant alterations in cerebellar metabolic physiology in a mouse model of adult onset hypothyroidism. Journal of Proteome Research. 10: 869-79. PMID 21028881 DOI: 10.1021/Pr100699M  0.448
2010 Kanani H, Dutta B, Klapa MI. Individual vs. combinatorial effect of elevated CO2 conditions and salinity stress on Arabidopsis thaliana liquid cultures: comparing the early molecular response using time-series transcriptomic and metabolomic analyses. Bmc Systems Biology. 4: 177. PMID 21190570 DOI: 10.1186/1752-0509-4-177  0.745
2010 Chrysanthopoulos PK, Goudar CT, Klapa MI. Metabolomics for high-resolution monitoring of the cellular physiological state in cell culture engineering. Metabolic Engineering. 12: 212-22. PMID 19914390 DOI: 10.1016/J.Ymben.2009.11.001  0.367
2010 Vernardis SI, Chrysanthopoulos PK, Goudar CT, Klapa MI. Metabolomics as molecular analysis tool in cell culture engineering Ifac Proceedings Volumes (Ifac-Papersonline). 11: 491-495. DOI: 10.3182/20100707-3-Be-2012.0103  0.425
2009 Dutta B, Kanani H, Quackenbush J, Klapa MI. Time-series integrated "omic" analyses to elucidate short-term stress-induced responses in plant liquid cultures. Biotechnology and Bioengineering. 102: 264-79. PMID 18958862 DOI: 10.1002/Bit.22036  0.761
2008 Syriopoulos C, Panayotarou A, Lai K, Klapa MI. Transcriptomic analysis of Saccharomyces cerevisiae physiology in the context of galactose assimilation perturbations. Molecular Biosystems. 4: 937-49. PMID 18704232 DOI: 10.1039/B718732G  0.357
2008 Kanani H, Chrysanthopoulos PK, Klapa MI. Standardizing GC-MS metabolomics. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 871: 191-201. PMID 18538643 DOI: 10.1016/J.Jchromb.2008.04.049  0.709
2007 Dutta B, Snyder R, Klapa MI. Significance analysis of time-series transcriptomic data: a methodology that enables the identification and further exploration of the differentially expressed genes at each time-point. Biotechnology and Bioengineering. 98: 668-78. PMID 17385748 DOI: 10.1002/Bit.21432  0.557
2007 Tsantili IC, Karim MN, Klapa MI. Quantifying the metabolic capabilities of engineered Zymomonas mobilis using linear programming analysis. Microbial Cell Factories. 6: 8. PMID 17349037 DOI: 10.1186/1475-2859-6-8  0.349
2007 Kanani HH, Klapa MI. Data correction strategy for metabolomics analysis using gas chromatography-mass spectrometry. Metabolic Engineering. 9: 39-51. PMID 17052933 DOI: 10.1016/J.Ymben.2006.08.001  0.716
2005 Kanani HH, Dutta B, Quackenbush J, Klapa MI. High-throughput time-series metabolomic analysis to identify regulation of Arabidopsis Thalina response to elevated Co2 by sugar signaling Aiche Annual Meeting, Conference Proceedings. 8407.  0.752
2005 Dutta B, Kanani HH, Quacknebush J, Klapa MI. Dynamic transcriptional profiling analysis of arabidopsis thaliana under CO2 and Nacl stress Aiche Annual Meeting, Conference Proceedings. 11679.  0.734
2005 Kanani HH, Klapa MI. High-throughput time-series metabolomic analysis of a systematically perturbed plant system Aiche Annual Meeting, Conference Proceedings. 3320-3321.  0.717
2004 Lai K, Klapa MI. Alternative pathways of galactose assimilation: could inverse metabolic engineering provide an alternative to galactosemic patients? Metabolic Engineering. 6: 239-44. PMID 15256214 DOI: 10.1016/J.Ymben.2004.01.001  0.376
2003 Klapa MI, Quackenbush J. The quest for the mechanisms of life. Biotechnology and Bioengineering. 84: 739-42. PMID 14708113 DOI: 10.1002/Bit.10858  0.371
2003 Klapa MI, Aon JC, Stephanopoulos G. Systematic quantification of complex metabolic flux networks using stable isotopes and mass spectrometry. European Journal of Biochemistry / Febs. 270: 3525-42. PMID 12919317 DOI: 10.1046/J.1432-1033.2003.03732.X  0.416
2003 Klapa MI, Aon JC, Stephanopoulos G. Ion-trap mass spectrometry used in combination with gas chromatography for high-resolution metabolic flux determination. Biotechniques. 34: 832-6, 838, 840 pass. PMID 12703309 DOI: 10.2144/03344Pt02  0.421
2003 Varela C, Agosin E, Baez M, Klapa M, Stephanopoulos G. Metabolic flux redistribution in Corynebacterium glutamicum in response to osmotic stress. Applied Microbiology and Biotechnology. 60: 547-55. PMID 12536254 DOI: 10.1007/S00253-002-1120-7  0.415
1999 Klapa MI, Park SM, Sinskey AJ, Stephanopoulos G. Metabolite and isotopomer balancing in the analysis of metabolic cycles: I. Theory. Biotechnology and Bioengineering. 62: 375-391. PMID 10099550 DOI: 10.1002/(Sici)1097-0290(19990220)62:4<375::Aid-Bit1>3.0.Co;2-O  0.399
1999 Park SM, Klapa MI, Sinskey AJ, Stephanopoulos G. Metabolite and isotopomer balancing in the analysis of metabolic cycles: II. Applications Biotechnology and Bioengineering. 62: 392-401. PMID 9921151 DOI: 10.1002/(Sici)1097-0290(19990220)62:4<392::Aid-Bit2>3.0.Co;2-S  0.419
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