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Mala D. Samaranayake, Ph.D. - Publications

Affiliations: 
2006 Wayne State University, Detroit, MI, United States 
Area:
Molecular Biology, Biochemistry
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6 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Vaisvila R, Ponnaluri VKC, Sun Z, Langhorst BW, Saleh L, Guan S, Dai N, Campbell MA, Sexton BS, Marks K, Samaranayake M, Samuelson JC, Church HE, Tamanaha E, Corrêa IR, et al. Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA. Genome Research. PMID 34140313 DOI: 10.1101/gr.266551.120  0.367
2021 Sun Z, Vaisvila R, Hussong LM, Yan B, Baum C, Saleh L, Samaranayake M, Guan S, Dai N, Corrêa IR, Pradhan S, Davis TB, Evans TC, Ettwiller LM. Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution. Genome Research. PMID 33468551 DOI: 10.1101/gr.265306.120  0.31
2012 Horton JR, Mabuchi MY, Cohen-Karni D, Zhang X, Griggs RM, Samaranayake M, Roberts RJ, Zheng Y, Cheng X. Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease. Nucleic Acids Research. 40: 9763-73. PMID 22848107 DOI: 10.1093/Nar/Gks719  0.322
2009 Canugovi C, Samaranayake M, Bhagwat AS. Transcriptional pausing and stalling causes multiple clustered mutations by human activation-induced deaminase. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 23: 34-44. PMID 18772346 DOI: 10.1096/Fj.08-115352  0.513
2006 Samaranayake M, Bujnicki JM, Carpenter M, Bhagwat AS. Evaluation of molecular models for the affinity maturation of antibodies: roles of cytosine deamination by AID and DNA repair. Chemical Reviews. 106: 700-19. PMID 16464021 DOI: 10.1021/Cr040496T  0.521
2003 Sohail A, Klapacz J, Samaranayake M, Ullah A, Bhagwat AS. Human activation-induced cytidine deaminase causes transcription-dependent, strand-biased C to U deaminations. Nucleic Acids Research. 31: 2990-4. PMID 12799424 DOI: 10.1093/Nar/Gkg464  0.52
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