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Soojin Ryu - Publications

Affiliations: 
Developmental Genetics of Nervous Systems Max Planck Institute for Medical Research, Heidelberg, Baden-Württemberg, Germany 
Area:
Development and Function of Hypothalamic Neural Circuits
Website:
http://www.mpimf-heidelberg.mpg.de/english/juniorResearchGroups/ryu/index.html

48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Nagpal J, Eachus H, Lityagina O, Ryu S. Optogenetic induction of chronic glucocorticoid exposure in early-life leads to blunted stress-response in larval zebrafish. The European Journal of Neuroscience. PMID 38602078 DOI: 10.1111/ejn.16301  0.571
2023 Herget U, Ryu S, De Marco RJ. Altered glucocorticoid reactivity and behavioral phenotype in rx3-/- larval zebrafish. Frontiers in Endocrinology. 14: 1187327. PMID 37484970 DOI: 10.3389/fendo.2023.1187327  0.754
2023 Graham SE, Clarke SL, Wu KH, Kanoni S, Zajac GJM, Ramdas S, Surakka I, Ntalla I, Vedantam S, Winkler TW, Locke AE, Marouli E, Hwang MY, Han S, Narita A, ... ... Ryu S, et al. Author Correction: The power of genetic diversity in genome-wide association studies of lipids. Nature. PMID 37237109 DOI: 10.1038/s41586-023-06194-2  0.308
2022 Kanoni S, Graham SE, Wang Y, Surakka I, Ramdas S, Zhu X, Clarke SL, Bhatti KF, Vedantam S, Winkler TW, Locke AE, Marouli E, Zajac GJM, Wu KH, Ntalla I, ... ... Ryu S, et al. Implicating genes, pleiotropy, and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis. Genome Biology. 23: 268. PMID 36575460 DOI: 10.1186/s13059-022-02837-1  0.348
2022 Ramdas S, Judd J, Graham SE, Kanoni S, Wang Y, Surakka I, Wenz B, Clarke SL, Chesi A, Wells A, Bhatti KF, Vedantam S, Winkler TW, Locke AE, Marouli E, ... ... Ryu S, et al. A multi-layer functional genomic analysis to understand noncoding genetic variation in lipids. American Journal of Human Genetics. 109: 1366-1387. PMID 35931049 DOI: 10.1016/j.ajhg.2022.06.012  0.377
2022 Eugenin von Bernhardi J, Biechl D, Miek L, Herget U, Ryu S, Wullimann MF. A versatile transcription factor: Multiple roles of orthopedia a (otpa) beyond its restricted localization in dopaminergic systems of developing and adult zebrafish (Danio rerio) brains. The Journal of Comparative Neurology. PMID 35708548 DOI: 10.1002/cne.25351  0.792
2022 Albert L, Nagpal J, Steinchen W, Zhang L, Werel L, Djokovic N, Ruzic D, Hoffarth M, Xu J, Kaspareit J, Abendroth F, Royant A, Bange G, Nikolic K, Ryu S, et al. Bistable Photoswitch Allows in Vivo Control of Hematopoiesis. Acs Central Science. 8: 57-66. PMID 35106373 DOI: 10.1021/acscentsci.1c00434  0.553
2021 Graham SE, Clarke SL, Wu KH, Kanoni S, Zajac GJM, Ramdas S, Surakka I, Ntalla I, Vedantam S, Winkler TW, Locke AE, Marouli E, Hwang MY, Han S, Narita A, ... ... Ryu S, et al. The power of genetic diversity in genome-wide association studies of lipids. Nature. PMID 34887591 DOI: 10.1038/s41586-021-04064-3  0.353
2019 Castillo-Ramírez LA, Ryu S, De Marco RJ. Active behaviour during early development shapes glucocorticoid reactivity. Scientific Reports. 9: 12796. PMID 31488853 DOI: 10.1038/S41598-019-49388-3  0.323
2019 Langebeck-Jensen K, Shahar OD, Schuman EM, Langer JD, Ryu S. Larval Zebrafish Proteome Regulation in Response to an Environmental Challenge. Proteomics. e1900028. PMID 31168896 DOI: 10.1002/Pmic.201900028  0.357
2018 Nagpal J, Herget U, Choi MK, Ryu S. Anatomy, development, and plasticity of the neurosecretory hypothalamus in zebrafish. Cell and Tissue Research. PMID 30109407 DOI: 10.1007/S00441-018-2900-4  0.769
2017 Herget U, Gutierrez-Triana JA, Salazar Thula O, Knerr B, Ryu S. Single-Cell Reconstruction of Oxytocinergic Neurons Reveals Separate Hypophysiotropic and Encephalotropic Subtypes in Larval Zebrafish. Eneuro. 4. PMID 28317020 DOI: 10.1523/ENEURO.0278-16.2016  0.767
2017 Biechl D, Tietje K, Ryu S, Grothe B, Gerlach G, Wullimann MF. Identification of accessory olfactory system and medial amygdala in the zebrafish. Scientific Reports. 7: 44295. PMID 28290515 DOI: 10.1038/Srep44295  0.304
2016 Beretta CA, Dross N, Guglielmi L, Bankhead P, Soulika M, Gutierrez-Triana JA, Paolini A, Poggi L, Falk J, Ryu S, Kapsimali M, Engel U, Carl M. Early Commissural Diencephalic Neurons Control Habenular Axon Extension and Targeting. Current Biology : Cb. PMID 28065605 DOI: 10.1016/J.Cub.2016.11.038  0.301
2016 Gutierrez-Triana JA, Mateo JL, Ibberson D, Ryu S, Wittbrodt J. iDamIDseq and iDEAR: An improved method and computational pipeline to profile chromatin-binding proteins. Development (Cambridge, England). PMID 27707796 DOI: 10.1242/Dev.139261  0.539
2016 De Marco RJ, Thiemann T, Groneberg AH, Herget U, Ryu S. Optogenetically enhanced pituitary corticotroph cell activity post-stress onset causes rapid organizing effects on behaviour. Nature Communications. 7: 12620. PMID 27646867 DOI: 10.1038/Ncomms12620  0.775
2016 Lee HC, Lee JY, Ryu SK, Lim JM, Chong S, Phi JH, Kim SK, Wang KC. A method of posterior fossa dural incision to minimize hemorrhage from the occipital sinus: the "mosquito" method. Child's Nervous System : Chns : Official Journal of the International Society For Pediatric Neurosurgery. PMID 27444295 DOI: 10.1007/s00381-016-3169-0  0.387
2016 Vom Berg-Maurer CM, Trivedi CA, Bollmann JH, De Marco RJ, Ryu S. The Severity of Acute Stress Is Represented by Increased Synchronous Activity and Recruitment of Hypothalamic CRH Neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 3350-62. PMID 26985042 DOI: 10.1523/Jneurosci.3390-15.2016  0.398
2015 Gutierrez-Triana JA, Herget U, Castillo-Ramirez LA, Lutz M, Yeh CM, De Marco RJ, Ryu S. Manipulation of Interrenal Cell Function in Developing Zebrafish Using Genetically Targeted Ablation and an Optogenetic Tool. Endocrinology. 156: 3394-401. PMID 26132917 DOI: 10.1210/En.2015-1021  0.778
2015 Groneberg AH, Herget U, Ryu S, De Marco RJ. Positive taxis and sustained responsiveness to water motions in larval zebrafish. Frontiers in Neural Circuits. 9: 9. PMID 25798089 DOI: 10.3389/Fncir.2015.00009  0.735
2015 Herget U, Ryu S. Coexpression analysis of nine neuropeptides in the neurosecretory preoptic area of larval zebrafish. Frontiers in Neuroanatomy. 9: 2. PMID 25729355 DOI: 10.3389/Fnana.2015.00002  0.803
2014 Gutierrez-Triana JA, Herget U, Lichtner P, Castillo-Ramírez LA, Ryu S. A vertebrate-conserved cis-regulatory module for targeted expression in the main hypothalamic regulatory region for the stress response. Bmc Developmental Biology. 14: 41. PMID 25427861 DOI: 10.1186/S12861-014-0041-X  0.793
2014 De Marco RJ, Groneberg AH, Yeh CM, Treviño M, Ryu S. The behavior of larval zebrafish reveals stressor-mediated anorexia during early vertebrate development. Frontiers in Behavioral Neuroscience. 8: 367. PMID 25368561 DOI: 10.3389/Fnbeh.2014.00367  0.329
2014 Herget U, Wolf A, Wullimann MF, Ryu S. Molecular neuroanatomy and chemoarchitecture of the neurosecretory preoptic-hypothalamic area in zebrafish larvae. The Journal of Comparative Neurology. 522: 1542-64. PMID 24127437 DOI: 10.1002/Cne.23480  0.796
2014 Herget U, Wolf A, Wullimann MF, Ryu S. Molecular Neuroanatomy and Chemoarchitecture of the Neurosecretory Preoptic-Hypothalamic Area in Zebrafish Larvae (Correction, vol 522, pg 1542, 2014) The Journal of Comparative Neurology. DOI: 10.1002/Cne.23600  0.743
2013 Yeh CM, Glöck M, Ryu S. An optimized whole-body cortisol quantification method for assessing stress levels in larval zebrafish. Plos One. 8: e79406. PMID 24223943 DOI: 10.1371/Journal.Pone.0079406  0.323
2013 De Marco RJ, Groneberg AH, Yeh CM, Castillo Ramírez LA, Ryu S. Optogenetic elevation of endogenous glucocorticoid level in larval zebrafish. Frontiers in Neural Circuits. 7: 82. PMID 23653595 DOI: 10.3389/Fncir.2013.00082  0.349
2013 Wolf A, Ryu S. Specification of posterior hypothalamic neurons requires coordinated activities of Fezf2, Otp, Sim1a and Foxb1.2. Development (Cambridge, England). 140: 1762-73. PMID 23533176 DOI: 10.1242/Dev.085357  0.426
2012 Gabriel JP, Trivedi CA, Maurer CM, Ryu S, Bollmann JH. Layer-specific targeting of direction-selective neurons in the zebrafish optic tectum. Neuron. 76: 1147-60. PMID 23259950 DOI: 10.1016/J.Neuron.2012.12.003  0.325
2012 Beretta CA, Dross N, Guiterrez-Triana JA, Ryu S, Carl M. Habenula circuit development: past, present, and future. Frontiers in Neuroscience. 6: 51. PMID 22536170 DOI: 10.3389/Fnins.2012.00051  0.328
2011 Tay TL, Ronneberger O, Ryu S, Nitschke R, Driever W. Comprehensive catecholaminergic projectome analysis reveals single-neuron integration of zebrafish ascending and descending dopaminergic systems. Nature Communications. 2: 171. PMID 21266970 DOI: 10.1038/Ncomms1171  0.608
2010 Kastenhuber E, Kratochwil CF, Ryu S, Schweitzer J, Driever W. Genetic dissection of dopaminergic and noradrenergic contributions to catecholaminergic tracts in early larval zebrafish. The Journal of Comparative Neurology. 518: 439-58. PMID 20017210 DOI: 10.1002/Cne.22214  0.622
2009 Löhr H, Ryu S, Driever W. Zebrafish diencephalic A11-related dopaminergic neurons share a conserved transcriptional network with neuroendocrine cell lineages. Development (Cambridge, England). 136: 1007-17. PMID 19234064 DOI: 10.1242/Dev.033878  0.628
2008 Meng S, Ryu S, Zhao B, Zhang DQ, Driever W, McMahon DG. Targeting retinal dopaminergic neurons in tyrosine hydroxylase-driven green fluorescent protein transgenic zebrafish. Molecular Vision. 14: 2475-83. PMID 19112533  0.588
2008 Ryu S, Mahler J, Acampora D, Holzschuh J, Erhardt S, Omodei D, Simeone A, Driever W. Orthopedia Homeodomain Protein Is Essential for Diencephalic Dopaminergic Neuron Development (DOI:10.1016/j.cub.2007.04.003) Current Biology. 18: 310. DOI: 10.1016/J.Cub.2008.02.025  0.578
2007 Filippi A, Dürr K, Ryu S, Willaredt M, Holzschuh J, Driever W. Expression and function of nr4a2, lmx1b, and pitx3 in zebrafish dopaminergic and noradrenergic neuronal development. Bmc Developmental Biology. 7: 135. PMID 18053265 DOI: 10.1186/1471-213X-7-135  0.63
2007 Ryu S, Mahler J, Acampora D, Holzschuh J, Erhardt S, Omodei D, Simeone A, Driever W. Orthopedia homeodomain protein is essential for diencephalic dopaminergic neuron development. Current Biology : Cb. 17: 873-80. PMID 17481897 DOI: 10.1016/J.Cub.2007.04.003  0.616
2007 Brockschmidt A, Todt U, Ryu S, Hoischen A, Landwehr C, Birnbaum S, Frenck W, Radlwimmer B, Lichter P, Engels H, Driever W, Kubisch C, Weber RG. Severe mental retardation with breathing abnormalities (Pitt-Hopkins syndrome) is caused by haploinsufficiency of the neuronal bHLH transcription factor TCF4. Human Molecular Genetics. 16: 1488-94. PMID 17478476 DOI: 10.1093/Hmg/Ddm099  0.586
2006 Chapouton P, Adolf B, Leucht C, Tannhäuser B, Ryu S, Driever W, Bally-Cuif L. her5 expression reveals a pool of neural stem cells in the adult zebrafish midbrain. Development (Cambridge, England). 133: 4293-303. PMID 17038515 DOI: 10.1242/Dev.02573  0.611
2006 Ryu S, Holzschuh J, Mahler J, Driever W. Genetic analysis of dopaminergic system development in zebrafish. Journal of Neural Transmission. Supplementum. 61-6. PMID 17017510 DOI: 10.1007/978-3-211-45295-0_11  0.62
2006 Ryu S, Driever W. Minichromosome maintenance proteins as markers for proliferation zones during embryogenesis. Cell Cycle (Georgetown, Tex.). 5: 1140-2. PMID 16721065 DOI: 10.4161/Cc.5.11.2779  0.593
2006 Dürr K, Holzschuh J, Filippi A, Ettl AK, Ryu S, Shepherd IT, Driever W. Differential roles of transcriptional mediator complex subunits Crsp34/Med27, Crsp150/Med14 and Trap100/Med24 during zebrafish retinal development. Genetics. 174: 693-705. PMID 16582438 DOI: 10.1534/Genetics.105.055152  0.591
2006 Kastenhuber E, Ryu S, Driever W. [P240]: Guidance of dopaminergic axonal projections in zebrafish International Journal of Developmental Neuroscience. 24: 598-598. DOI: 10.1016/J.Ijdevneu.2006.09.299  0.521
2005 Ryu S, Holzschuh J, Erhardt S, Ettl AK, Driever W. Depletion of minichromosome maintenance protein 5 in the zebrafish retina causes cell-cycle defect and apoptosis. Proceedings of the National Academy of Sciences of the United States of America. 102: 18467-72. PMID 16339308 DOI: 10.1073/Pnas.0506187102  0.605
2001 Holzschuh J, Ryu S, Aberger F, Driever W. Dopamine transporter expression distinguishes dopaminergic neurons from other catecholaminergic neurons in the developing zebrafish embryo. Mechanisms of Development. 101: 237-43. PMID 11231083 DOI: 10.1016/S0925-4773(01)00287-8  0.587
1999 Ryu S, Tjian R. Purification of transcription cofactor complex CRSP. Proceedings of the National Academy of Sciences of the United States of America. 96: 7137-42. PMID 10377381 DOI: 10.1073/Pnas.96.13.7137  0.505
1999 Ryu S, Zhou S, Ladurner AG, Tjian R. The transcriptional cofactor complex CRSP is required for activity of the enhancer-binding protein Sp1. Nature. 397: 446-50. PMID 9989412 DOI: 10.1038/17141  0.658
1998 Näär AM, Ryu S, Tjian R. Cofactor requirements for transcriptional activation by Sp1. Cold Spring Harbor Symposia On Quantitative Biology. 63: 189-99. PMID 10384283 DOI: 10.1101/Sqb.1998.63.189  0.478
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