Year |
Citation |
Score |
2017 |
Lykov K, Nematbakhsh Y, Shang M, Lim CT, Pivkin IV. Probing eukaryotic cell mechanics via mesoscopic simulations. Plos Computational Biology. 13: e1005726. PMID 28922399 DOI: 10.1371/Journal.Pcbi.1005726 |
0.404 |
|
2016 |
Peter EK, Pivkin IV, Shea JE. A canonical replica exchange molecular dynamics implementation with normal pressure in each replica. The Journal of Chemical Physics. 145: 044903. PMID 27475393 DOI: 10.1063/1.4958325 |
0.339 |
|
2016 |
Pivkin IV, Peng Z, Karniadakis GE, Buffet PA, Dao M, Suresh S. Biomechanics of red blood cells in human spleen and consequences for physiology and disease. Proceedings of the National Academy of Sciences of the United States of America. PMID 27354532 DOI: 10.1073/Pnas.1606751113 |
0.545 |
|
2016 |
Peter EK, Shea JE, Pivkin IV. Coarse kMC-based replica exchange algorithms for the accelerated simulation of protein folding in explicit solvent. Physical Chemistry Chemical Physics : Pccp. PMID 27111190 DOI: 10.1039/C5Cp06867C |
0.329 |
|
2015 |
Peter EK, Lykov K, Pivkin IV. A polarizable coarse-grained protein model for dissipative particle dynamics. Physical Chemistry Chemical Physics : Pccp. 17: 24452-61. PMID 26339692 DOI: 10.1039/C5Cp03479E |
0.384 |
|
2015 |
Lykov K, Li X, Lei H, Pivkin IV, Karniadakis GE. Inflow/Outflow Boundary Conditions for Particle-Based Blood Flow Simulations: Application to Arterial Bifurcations and Trees. Plos Computational Biology. 11: e1004410. PMID 26317829 DOI: 10.1371/Journal.Pcbi.1004410 |
0.615 |
|
2015 |
Lykov K, Li X, Lei H, Pivkin IV, Karniadakis GE. Snaphot for simulation of the blood flow in part of arterial network with three inlets and multiple outlets. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1004410.G007 |
0.546 |
|
2015 |
Lykov K, Li X, Lei H, Pivkin IV, Karniadakis GE. Effect of bifurcation angle on particle recovery efficiency. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1004410.G006 |
0.489 |
|
2015 |
Lykov K, Li X, Lei H, Pivkin IV, Karniadakis GE. Verification of the accuracy of the proposed method. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1004410.G003 |
0.411 |
|
2015 |
Lykov K, Li X, Lei H, Pivkin IV, Karniadakis GE. Schematic illustration of the computational domain of an open system. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1004410.G002 |
0.423 |
|
2015 |
Lykov K, Li X, Lei H, Pivkin IV, Karniadakis GE. Simulation of blood flow in a microvascular bifurcation using the proposed open boundary conditions. Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.1004410.G001 |
0.568 |
|
2015 |
Peng Z, Pivkin I, Dao M, Karniadakis G. Modeling Transmigration of Malaria Infected Red Blood Cells through Inter-Endothelial Slits in Human Spleens using Dissipative Particle Dynamics Biophysical Journal. 108: 458a. DOI: 10.1016/J.Bpj.2014.11.2499 |
0.554 |
|
2014 |
Peter EK, Pivkin IV. A polarizable coarse-grained water model for dissipative particle dynamics. The Journal of Chemical Physics. 141: 164506. PMID 25362324 DOI: 10.1063/1.4899317 |
0.376 |
|
2014 |
Cruz-Chu ER, Malafeev A, Pajarskas T, Pivkin IV, Koumoutsakos P. Structure and response to flow of the glycocalyx layer. Biophysical Journal. 106: 232-43. PMID 24411255 DOI: 10.1016/J.Bpj.2013.09.060 |
0.363 |
|
2014 |
Peng Z, Pivkin IV, Li X, Karniadakis GE, Dao M. Two-Component Dissipative Particle Dynamics Model of Red Blood Cells Biophysical Journal. 106: 573a. DOI: 10.1016/J.Bpj.2013.11.3179 |
0.612 |
|
2013 |
Peng Z, Li X, Pivkin IV, Dao M, Karniadakis GE, Suresh S. Lipid bilayer and cytoskeletal interactions in a red blood cell. Proceedings of the National Academy of Sciences of the United States of America. 110: 13356-61. PMID 23898181 DOI: 10.1073/Pnas.1311827110 |
0.575 |
|
2013 |
Li X, Pivkin IV, Liang H. Hydrodynamic effects on flow-induced polymer translocation through a microfluidic channel Polymer (United Kingdom). 54: 4309-4317. DOI: 10.1016/J.Polymer.2013.06.022 |
0.407 |
|
2012 |
Peng Z, Pivkin I, Dao M. Multiscale Simulation of Malaria-Infected Erythrocytes and Spherocytes of Hereditary Spherocytosis Passing Endothelial Slits in the Spleen Biophysical Journal. 102: 563a. DOI: 10.1016/J.Bpj.2011.11.3066 |
0.508 |
|
2012 |
Fedosov D, Pivkin I, Pan W, Dao M, Caswell B, Karniadakis GE. Multiscale modelling of hematologic disorders Modeling, Simulation and Applications. 5: 289-331. DOI: 10.1007/978-88-470-1935-5_10 |
0.669 |
|
2011 |
Bow H, Pivkin IV, Diez-Silva M, Goldfless SJ, Dao M, Niles JC, Suresh S, Han J. A microfabricated deformability-based flow cytometer with application to malaria. Lab On a Chip. 11: 1065-73. PMID 21293801 DOI: 10.1039/C0Lc00472C |
0.382 |
|
2011 |
Quinn DJ, Pivkin I, Wong SY, Chiam KH, Dao M, Karniadakis GE, Suresh S. Combined simulation and experimental study of large deformation of red blood cells in microfluidic systems. Annals of Biomedical Engineering. 39: 1041-50. PMID 21240637 DOI: 10.1007/S10439-010-0232-Y |
0.572 |
|
2010 |
Pivkin IV, Caswell B, Karniadakis GE. Dissipative particle dynamics Reviews in Computational Chemistry. 27: 85-110. DOI: 10.1002/9780470890905.ch2 |
0.453 |
|
2009 |
Pivkin I, Richardson P, Karniadakis G. Effect of red blood cells on platelet aggregation. Ieee Engineering in Medicine and Biology Magazine : the Quarterly Magazine of the Engineering in Medicine & Biology Society. 28: 32-7. PMID 19349249 DOI: 10.1109/Memb.2009.931788 |
0.458 |
|
2009 |
Li X, Pivkin IV, Liang H, Karniadakis GE. Shape transformations of membrane vesicles from amphiphilic triblock copolymers: A dissipative particle dynamics simulation study Macromolecules. 42: 3195-3200. DOI: 10.1021/Ma9000918 |
0.522 |
|
2008 |
Pivkin IV, Karniadakis GE. Accurate coarse-grained modeling of red blood cells. Physical Review Letters. 101: 118105. PMID 18851338 DOI: 10.1103/Physrevlett.101.118105 |
0.569 |
|
2008 |
Pan W, Pivkin IV, Karniadakis GE. Single-particle hydrodynamics in DPD: A new formulation Epl. 84. DOI: 10.1209/0295-5075/84/10012 |
0.569 |
|
2008 |
Fedosov DA, Pivkin IV, Karniadakis GE. Velocity limit in DPD simulations of wall-bounded flows Journal of Computational Physics. 227: 2540-2559. DOI: 10.1016/J.Jcp.2007.11.009 |
0.693 |
|
2006 |
Pivkin IV, Richardson PD, Karniadakis G. Blood flow velocity effects and role of activation delay time on growth and form of platelet thrombi. Proceedings of the National Academy of Sciences of the United States of America. 103: 17164-9. PMID 17085579 DOI: 10.1073/Pnas.0608546103 |
0.532 |
|
2006 |
Pivkin IV, Karniadakis GE. Controlling density fluctuations in wall-bounded dissipative particle dynamics systems. Physical Review Letters. 96: 206001. PMID 16803187 DOI: 10.1103/Physrevlett.96.206001 |
0.576 |
|
2006 |
Pivkin IV, Karniadakis GE. Coarse-graining limits in open and wall-bounded dissipative particle dynamics systems. The Journal of Chemical Physics. 124: 184101. PMID 16709091 DOI: 10.1063/1.2191050 |
0.544 |
|
2006 |
Richardson PD, Pivkin IV, Karniadakis GE, Laidlaw DH. Blood flow at arterial branches: Complexities to resolve for the angioplasty suite Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3993: 538-545. DOI: 10.1007/11758532_71 |
0.454 |
|
2005 |
Keaveny EE, Pivkin IV, Maxey M, Em Karniadakis G. A comparative study between dissipative particle dynamics and molecular dynamics for simple- and complex-geometry flows. The Journal of Chemical Physics. 123: 104107. PMID 16178589 DOI: 10.1063/1.2018635 |
0.487 |
|
2005 |
Pivkin IV, Richardson PD, Laidlaw DH, Karniadakis GE. Combined effects of pulsatile flow and dynamic curvature on wall shear stress in a coronary artery bifurcation model. Journal of Biomechanics. 38: 1283-90. PMID 15863113 DOI: 10.1016/J.Jbiomech.2004.06.015 |
0.549 |
|
2005 |
Pivkin IV, Karniadakis GE. A new method to impose no-slip boundary conditions in dissipative particle dynamics Journal of Computational Physics. 207: 114-128. DOI: 10.1016/J.Jcp.2005.01.006 |
0.572 |
|
2005 |
Pivkin IV, Hueso E, Weinstein R, Laidlaw DH, Swartz S, Karniadakis GE. Simulation and visualization of air flow around bat wings during flight Lecture Notes in Computer Science. 3515: 689-694. |
0.438 |
|
2004 |
Sobel JS, Forsberg AS, Laidlaw DH, Zeleznik RC, Keefe DF, Pivkin I, Karniadakis GE, Richardson P, Swartz S. Particle flurries: synoptic 3D pulsatile flow visualization. Ieee Computer Graphics and Applications. 24: 76-85. PMID 15387231 DOI: 10.1109/Mcg.2004.1274065 |
0.509 |
|
Show low-probability matches. |