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Mohammad Alkhamis, Ph.D. - Publications

Affiliations: 
2014 Epidemiology University of California, Davis, Davis, CA 
Area:
Epidemiology
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Alkhamis MA, Aguilar-Vega C, Fountain-Jones NM, Lin K, Perez AM, Sánchez-Vizcaíno JM. Global emergence and evolutionary dynamics of bluetongue virus. Scientific Reports. 10: 21677. PMID 33303862 DOI: 10.1038/s41598-020-78673-9  0.54
2020 Alkhamis MA, Li C, Torremorell M. Animal Disease Surveillance in the 21st Century: Applications and Robustness of Phylodynamic Methods in Recent U.S. Human-Like H3 Swine Influenza Outbreaks. Frontiers in Veterinary Science. 7: 176. PMID 32373634 DOI: 10.3389/Fvets.2020.00176  0.321
2019 Omondi G, Alkhamis MA, Obanda V, Gakuya F, Sangula A, Pauszek S, Perez A, Ngulu S, van Aardt R, Arzt J, VanderWaal K. Phylogeographic and cross-species transmission dynamics of SAT1 and SAT2 Foot-and-Mouth Disease Virus in Eastern Africa. Molecular Ecology. PMID 31074125 DOI: 10.1111/Mec.15125  0.549
2019 Alkhamis MA, Fernández-Fontelo A, VanderWaal K, Abuhadida S, Puig P, Alba-Casals A. Temporal dynamics of Middle East respiratory syndrome coronavirus in the Arabian Peninsula, 2012-2017. Epidemiology and Infection. 147: 1-10. PMID 30293534 DOI: 10.1017/S0950268818002728  0.386
2019 Alkhamis M, Fountain-Jones N, Perez A, Sanchez-Vizcaino J. Spatial Machine Learning Approach for Risk-Based Surveillance of Bluetongue Virus Serotypes in Europe Frontiers in Veterinary Science. 6. DOI: 10.3389/Conf.Fvets.2019.05.00057  0.461
2019 Alkhamis M, Aguilar C, Perez A, Sanchez-Vizcaino J. Bayesian Phylodynamic Analyses of Segment 10 Reveals Global Origin, Spread, and Host Transmission of Bluetongue Virus Frontiers in Veterinary Science. 6. DOI: 10.3389/Conf.Fvets.2019.05.00048  0.483
2018 Al-Mouqatea S, Alkhamis M, Akbar B, Ali A, Al-Aqeel H, Bin-Heji A, Razzaque M, Alvarez J, Perez A. Bayesian estimation of ELISA and gamma interferon test accuracy for the detection of bovine tuberculosis in caudal fold test-negative dairy cattle in Kuwait. Journal of Veterinary Diagnostic Investigation : Official Publication of the American Association of Veterinary Laboratory Diagnosticians, Inc. 1040638718759574. PMID 29431048 DOI: 10.1177/1040638718759574  0.484
2018 Kanankege KS, Alkhamis MA, Perez AM, Phelps NB. Zebra mussels and Eurasian watermilfoil reporting patterns in Minnesota Journal of Great Lakes Research. 44: 458-466. DOI: 10.1016/J.Jglr.2018.02.008  0.523
2017 Kanankege KST, Alkhamis MA, Phelps NBD, Perez AM. A Probability Co-Kriging Model to Account for Reporting Bias and Recognize Areas at High Risk for Zebra Mussels and Eurasian Watermilfoil Invasions in Minnesota. Frontiers in Veterinary Science. 4: 231. PMID 29354638 DOI: 10.3389/Fvets.2017.00231  0.527
2017 Alkhamis MA, Arruda AG, Vilalta C, Morrison RB, Perez AM. Surveillance of porcine reproductive and respiratory syndrome virus in the United States using risk mapping and species distribution modeling. Preventive Veterinary Medicine. PMID 29169685 DOI: 10.1016/J.Prevetmed.2017.11.011  0.575
2017 Ekong PS, Fountain-Jones NM, Alkhamis MA. Spatiotemporal evolutionary epidemiology of H5N1 highly pathogenic avian influenza in West Africa and Nigeria, 2006-2015. Transboundary and Emerging Diseases. 65: e70-e82. PMID 28710829 DOI: 10.1111/tbed.12680  0.324
2017 Vilalta C, Arruda AG, Tousignant SJP, Valdes-Donoso P, Muellner P, Muellner U, Alkhamis MA, Morrison RB, Perez AM. A Review of Quantitative Tools Used to Assess the Epidemiology of Porcine Reproductive and Respiratory Syndrome in U.S. Swine Farms Using Dr. Morrison's Swine Health Monitoring Program Data. Frontiers in Veterinary Science. 4: 94. PMID 28702459 DOI: 10.3389/Fvets.2017.00094  0.52
2017 Alkhamis MA, Arruda AG, Morrison RB, Perez AM. Novel approaches for Spatial and Molecular Surveillance of Porcine Reproductive and Respiratory Syndrome Virus (PRRSv) in the United States. Scientific Reports. 7: 4343. PMID 28659596 DOI: 10.1038/S41598-017-04628-2  0.553
2017 Arruda AG, Alkhamis MA, VanderWaal K, Morrison RB, Perez AM. Estimation of Time-Dependent Reproduction Numbers for Porcine Reproductive and Respiratory Syndrome across Different Regions and Production Systems of the US. Frontiers in Veterinary Science. 4: 46. PMID 28424778 DOI: 10.3389/Fvets.2017.00046  0.531
2017 Willeberg PW, AlKhamis M, Boklund A, Perez AM, Enøe C, Halasa T. Semiquantitative Decision Tools for FMD Emergency Vaccination Informed by Field Observations and Simulated Outbreak Data. Frontiers in Veterinary Science. 4: 43. PMID 28396862 DOI: 10.3389/Fvets.2017.00043  0.525
2016 Alvarez J, Valdes-Donoso P, Tousignant S, Alkhamis M, Morrison R, Perez A. Novel analytic tools for the study of porcine reproductive and respiratory syndrome virus (PRRSv) in endemic settings: lessons learned in the U.S. Porcine Health Management. 2: 3. PMID 28405429 DOI: 10.1186/S40813-016-0019-0  0.572
2016 Belkhiria J, Alkhamis MA, Martínez-López B. Application of Species Distribution Modeling for Avian Influenza surveillance in the United States considering the North America Migratory Flyways. Scientific Reports. 6: 33161. PMID 27624404 DOI: 10.1038/srep33161  0.311
2016 Alkhamis M, Hijmans RJ, Al-Enezi A, Martínez-López B, Perea AM. The Use of Spatial and Spatiotemporal Modeling for Surveillance of H5N1 Highly Pathogenic Avian Influenza in Poultry in the Middle East. Avian Diseases. 60: 146-55. PMID 27309050 DOI: 10.1637/11106-042115-Reg  0.465
2016 Alkhamis MA, VanderWaal K. Spatial and Temporal Epidemiology of Lumpy Skin Disease in the Middle East, 2012-2015. Frontiers in Veterinary Science. 3: 19. PMID 26973845 DOI: 10.3389/Fvets.2016.00019  0.36
2016 Alkhamis MA, Perez AM, Murtaugh MP, Wang X, Morrison RB. Applications of Bayesian Phylodynamic Methods in a Recent U.S. Porcine Reproductive and Respiratory Syndrome Virus Outbreak. Frontiers in Microbiology. 7: 67. PMID 26870024 DOI: 10.3389/Fmicb.2016.00067  0.552
2015 Alkhamis MA, Moore BR, Perez AM. Phylodynamics of H5N1 Highly Pathogenic Avian Influenza in Europe, 2005-2010: Potential for Molecular Surveillance of New Outbreaks. Viruses. 7: 3310-28. PMID 26110587 DOI: 10.3390/V7062773  0.55
2014 Ehizibolo DO, Perez AM, Carrillo C, Pauszek S, AlKhamis M, Ajogi I, Umoh JU, Kazeem HM, Ehizibolo PO, Fabian A, Berninger M, Moran K, Rodriguez LL, Metwally SA. Epidemiological analysis, serological prevalence and genotypic analysis of foot-and-mouth disease in Nigeria 2008-2009. Transboundary and Emerging Diseases. 61: 500-10. PMID 23347819 DOI: 10.1111/Tbed.12054  0.54
2013 Alkhamis M, Perez A, Batey N, Howard W, Baillie G, Watson S, Franz S, Focosi-Snyman R, Onita I, Cioranu R, Turcitu M, Kellam P, Brown IH, Breed AC. Modeling the association of space, time, and host species with variation of the HA, NA, and NS genes of H5N1 highly pathogenic avian influenza viruses isolated from birds in Romania in 2005-2007. Avian Diseases. 57: 612-21. PMID 24283126 DOI: 10.1637/10494-011713-Reg.1  0.516
2013 Halasa T, Willeberg P, Christiansen LE, Boklund A, AlKhamis M, Perez A, Enøe C. Decisions on control of foot-and-mouth disease informed using model predictions Preventive Veterinary Medicine. 112: 194-202. PMID 24080392 DOI: 10.1016/J.Prevetmed.2013.09.003  0.489
2012 Alkhamis M, Willeberg P, Carlsson U, Carpenter T, Perez A. Alternative scan-based approaches to identify space-time clusters of highly pathogenic avian influenza virus H5N1 in wild birds in Denmark and Sweden in 2006. Avian Diseases. 56: 1040-8. PMID 23402133 DOI: 10.1637/10192-041012-Reg.1  0.595
2011 Perez A, AlKhamis M, Carlsson U, Brito B, Carrasco-Medanic R, Whedbee Z, Willeberg P. Global animal disease surveillance Spatial and Spatio-Temporal Epidemiology. 2: 135-145. PMID 22748173 DOI: 10.1016/J.Sste.2011.07.006  0.501
2010 Willeberg P, Perez A, Thurmond M, Ascher M, Carpenter T, AlKhamis M. Visualization and analysis of the Danish 2006 highly pathogenic avian influenza virus H5N1 wild bird surveillance data by a prototype avian influenza BioPortal. Avian Diseases. 54: 433-9. PMID 20521674 DOI: 10.1637/8820-040209-Reg.1  0.557
2010 Mardones F, Perez A, Sanchez J, Alkhamis M, Carpenter T. Parameterization of the duration of infection stages of serotype O foot-and-mouth disease virus: an analytical review and meta-analysis with application to simulation models. Veterinary Research. 41: 45. PMID 20205988 DOI: 10.1051/Vetres/2010017  0.537
2009 Alkhamis MA, Perez AM, Yadin H, Knowles NJ. Temporospatial clustering of foot-and-mouth disease outbreaks in Israel and Palestine, 2006-2007. Transboundary and Emerging Diseases. 56: 99-107. PMID 19245666 DOI: 10.1111/J.1865-1682.2009.01066.X  0.567
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