| Year |
Citation |
Score |
| 2020 |
Vos RA, Katayama T, Mishima H, Kawano S, Kawashima S, Kim JD, Moriya Y, Tokimatsu T, Yamaguchi A, Yamamoto Y, Wu H, Amstutz P, Antezana E, Aoki NP, Arakawa K, ... ... Kim JH, et al. BioHackathon 2015: Semantics of data for life sciences and reproducible research. F1000research. 9: 136. PMID 32308977 DOI: 10.12688/F1000Research.18236.1 |
0.329 |
|
| 2019 |
Kim JD, Cohen KB, Collier N, Lu Z, Rinaldi F. Introduction to BLAH5 special issue: recent progress on interoperability of biomedical text mining. Genomics & Informatics. 17: e12. PMID 31307127 DOI: 10.5808/Gi.2019.17.2.E12 |
0.332 |
|
| 2019 |
Kim JD, Wang Y, Fujiwara T, Okuda S, Callahan TJ, Cohen KB. Open Agile Text Mining for Bioinformatics: The PubAnnotation Ecosystem. Bioinformatics (Oxford, England). PMID 30937439 DOI: 10.1093/Bioinformatics/Btz227 |
0.348 |
|
| 2019 |
Callahan TJ, Stefanski AL, Baumgartner WA, Hunter LE, Fujiwara T, Kim J, Cirincione A, Kann MG. Identifying and annotating uninvestigated preeclampsia-related genes using linked open biomedical data F1000research. 8. DOI: 10.7490/F1000Research.1116612.1 |
0.305 |
|
| 2019 |
Katayama T, Kawashima S, Micklem G, Kawano S, Kim J, Kocbek S, Okamoto S, Wang Y, Wu H, Yamaguchi A, Yamamoto Y, Antezana E, Aoki-Kinoshita KF, Arakawa K, Banno M, et al. BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services F1000research. 8: 1677. DOI: 10.12688/F1000Research.18238.1 |
0.35 |
|
| 2017 |
Kocbek S, Kim JD. Exploring biomedical ontology mappings with graph theory methods. Peerj. 5: e2990. PMID 28265499 DOI: 10.7717/Peerj.2990 |
0.354 |
|
| 2015 |
Verspoor K, Kim J, Dumontier M. Interoperability of text corpus annotations with the semantic web Bmc Proceedings. 9: 1-3. DOI: 10.1186/1753-6561-9-S5-A2 |
0.368 |
|
| 2015 |
Kim J, Cohen KB, Collier N, Lu Z, Stenetorp P. Introduction to the Biomedical Linked Annotation Hackathon (BLAH) 2015 Symposium Bmc Proceedings. 9: 1-1. DOI: 10.1186/1753-6561-9-S5-A1 |
0.395 |
|
| 2013 |
Aoki-Kinoshita KF, Bolleman J, Campbell MP, Kawano S, Kim JD, Lütteke T, Matsubara M, Okuda S, Ranzinger R, Sawaki H, Shikanai T, Shinmachi D, Suzuki Y, Toukach P, Yamada I, et al. Introducing glycomics data into the Semantic Web. Journal of Biomedical Semantics. 4: 39. PMID 24280648 DOI: 10.1186/2041-1480-4-39 |
0.34 |
|
| 2013 |
Hakenberg J, Nenadic G, Rebholz-Schuhmann D, Kim JD. Literature mining solutions for life science research. Advances in Bioinformatics. 2013: 320436. PMID 23365570 DOI: 10.1155/2013/320436 |
0.309 |
|
| 2012 |
Nguyen N, Kim JD, Miwa M, Matsuzaki T, Tsujii J. Improving protein coreference resolution by simple semantic classification. Bmc Bioinformatics. 13: 304. PMID 23157272 DOI: 10.1186/1471-2105-13-304 |
0.309 |
|
| 2012 |
Kim JD, Nguyen N, Wang Y, Tsujii J, Takagi T, Yonezawa A. The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011. Bmc Bioinformatics. 13: S1. PMID 22759455 DOI: 10.1186/1471-2105-13-S11-S1 |
0.315 |
|
| 2010 |
Ohta T, Pyysalo S, Kim JD, Tsujii J. A re-evaluation of biomedical named entity-term relations. Journal of Bioinformatics and Computational Biology. 8: 917-28. PMID 20981895 DOI: 10.1142/S0219720010005014 |
0.366 |
|
| 2010 |
Miwa M, Saetre R, Kim JD, Tsujii J. Event extraction with complex event classification using rich features. Journal of Bioinformatics and Computational Biology. 8: 131-46. PMID 20183879 DOI: 10.1142/S0219720010004586 |
0.327 |
|
| 2009 |
Wang Y, Kim JD, Saetre R, Pyysalo S, Tsujii J. Investigating heterogeneous protein annotations toward cross-corpora utilization. Bmc Bioinformatics. 10: 403. PMID 19995463 DOI: 10.1186/1471-2105-10-403 |
0.376 |
|
| 2008 |
Oda K, Kim JD, Ohta T, Okanohara D, Matsuzaki T, Tateisi Y, Tsujii J. New challenges for text mining: mapping between text and manually curated pathways. Bmc Bioinformatics. 9: S5. PMID 18426550 DOI: 10.1186/1471-2105-9-S3-S5 |
0.313 |
|
| 2008 |
Kim JD, Ohta T, Tsujii J. Corpus annotation for mining biomedical events from literature. Bmc Bioinformatics. 9: 10. PMID 18182099 DOI: 10.1186/1471-2105-9-10 |
0.384 |
|
| 2003 |
Kim JD, Ohta T, Tateisi Y, Tsujii J. GENIA corpus--semantically annotated corpus for bio-textmining. Bioinformatics (Oxford, England). 19: i180-2. PMID 12855455 DOI: 10.1093/Bioinformatics/Btg1023 |
0.364 |
|
| 2001 |
Ohta T, Tateisi Y, Kim J, Mima H, Tsujii J. Ontology Based Corpus Annotation and Tools Genome Informatics. 12: 469-470. DOI: 10.11234/Gi1990.12.469 |
0.328 |
|
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