| Year |
Citation |
Score |
| 2024 |
Lu X, Chandravanshi M, Sabbasani VR, Gaikwad S, Hughitt VK, Gyabaah-Kessie N, Scroggins BT, Das S, Myint W, Clapp ME, Schwieters CD, Dyba MA, Bolhuis DL, Koscielniak JW, Andresson T, ... ... Walters KJ, et al. A structure-based designed small molecule depletes hRpn13 and a select group of KEN box proteins. Nature Communications. 15: 2485. PMID 38509117 DOI: 10.1038/s41467-024-46644-7 |
0.401 |
|
| 2023 |
Osei-Amponsa V, Chandravanshi M, Lu X, Magidson V, Das S, Andresson T, Dyba M, Sabbasani VR, Swenson RE, Fromont C, Shrestha B, Zhao Y, Clapp ME, Chari R, Walters KJ. hRpn13 shapes the proteome and transcriptome through epigenetic factors HDAC8, PADI4, and transcription factor NF-κB p50. Molecular Cell. 84: 522-537.e8. PMID 38151017 DOI: 10.1016/j.molcel.2023.11.035 |
0.311 |
|
| 2023 |
Chen X, Walters KJ. H, N, C resonance assignments for proteasome shuttle factor hHR23a. Biomolecular Nmr Assignments. PMID 37812322 DOI: 10.1007/s12104-023-10157-z |
0.364 |
|
| 2023 |
Chen X, Walters K. 1H, 15N, 13C resonance assignments for proteasome shuttle factor hHR23a. Research Square. PMID 37645848 DOI: 10.21203/rs.3.rs-3256627/v1 |
0.364 |
|
| 2023 |
Negi H, Osei-Amponsa V, Ibrahim B, Evans CN, Sullenberger C, Loncarek J, Chari R, Walters KJ. An engineered cell line with a hRpn1-attached handle to isolate proteasomes. The Journal of Biological Chemistry. 104948. PMID 37354974 DOI: 10.1016/j.jbc.2023.104948 |
0.358 |
|
| 2023 |
Buel GR, Chen X, Myint W, Kayode O, Folimonova V, Cruz A, Skorupka KA, Matsuo H, Walters KJ. E6AP AZUL interaction with UBQLN1/2 in cells, condensates, and an AlphaFold-NMR integrated structure. Structure (London, England : 1993). PMID 36827983 DOI: 10.1016/j.str.2023.01.012 |
0.439 |
|
| 2022 |
Osei-Amponsa V, Walters KJ. Proteasome substrate receptors and their therapeutic potential. Trends in Biochemical Sciences. PMID 35817651 DOI: 10.1016/j.tibs.2022.06.006 |
0.511 |
|
| 2022 |
Cable J, Weber-Ban E, Clausen T, Walters KJ, Sharon M, Finley DJ, Gu Y, Hanna J, Feng Y, Martens S, Simonsen A, Hansen M, Zhang H, Goodwin JM, Reggio A, et al. Targeted protein degradation: from small molecules to complex organelles-a Keystone Symposia report. Annals of the New York Academy of Sciences. PMID 35000205 DOI: 10.1111/nyas.14745 |
0.328 |
|
| 2021 |
Lu X, Sabbasani VR, Osei-Amponsa V, Evans CN, King JC, Tarasov SG, Dyba M, Das S, Chan KC, Schwieters CD, Choudhari S, Fromont C, Zhao Y, Tran B, Chen X, ... ... Walters KJ, et al. Structure-guided bifunctional molecules hit a DEUBAD-lacking hRpn13 species upregulated in multiple myeloma. Nature Communications. 12: 7318. PMID 34916494 DOI: 10.1038/s41467-021-27570-4 |
0.334 |
|
| 2020 |
Chen X, Htet ZM, López-Alfonzo E, Martin A, Walters KJ. Proteasome interaction with ubiquitinated substrates: from mechanisms to therapies. The Febs Journal. PMID 33211406 DOI: 10.1111/febs.15638 |
0.423 |
|
| 2020 |
Chen X, Dorris Z, Shi D, Huang RK, Khant H, Fox T, de Val N, Williams D, Zhang P, Walters KJ. Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome. Structure (London, England : 1993). PMID 32783951 DOI: 10.1016/j.str.2020.07.011 |
0.4 |
|
| 2020 |
Osei-Amponsa V, Sridharan V, Tandon M, Evans CN, Klarmann K, Cheng KT, Lack J, Chari R, Walters KJ. Impact of losing hRpn13 Pru or UCHL5 on proteasome clearance of ubiquitinated proteins and RA190 cytotoxicity. Molecular and Cellular Biology. PMID 32631902 DOI: 10.1128/Mcb.00122-20 |
0.438 |
|
| 2020 |
Lu X, Ebelle DL, Matsuo H, Walters KJ. An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure. Structure (London, England : 1993). PMID 32160516 DOI: 10.1016/j.str.2020.02.007 |
0.363 |
|
| 2020 |
Buel GR, Chen X, Chari R, O'Neill MJ, Ebelle DL, Jenkins C, Sridharan V, Tarasov SG, Tarasova NI, Andresson T, Walters KJ. Structure of E3 ligase E6AP with a proteasome-binding site provided by substrate receptor hRpn10. Nature Communications. 11: 1291. PMID 32157086 DOI: 10.1038/s41467-020-15073-7 |
0.448 |
|
| 2019 |
Chen X, Ebelle DL, Wright BJ, Sridharan V, Hooper E, Walters KJ. Structure of hRpn10 Bound to UBQLN2 UBL Illustrates Basis for Complementarity between Shuttle Factors and Substrates at the Proteasome. Journal of Molecular Biology. PMID 30664872 DOI: 10.1016/j.jmb.2019.01.021 |
0.508 |
|
| 2017 |
Lu X, Nowicka U, Sridharan V, Liu F, Randles L, Hymel D, Dyba M, Tarasov SG, Tarasova NI, Zhao XZ, Hamazaki J, Murata S, Burke TR, Walters KJ. Structure of the Rpn13-Rpn2 complex provides insights for Rpn13 and Uch37 as anticancer targets. Nature Communications. 8: 15540. PMID 28598414 DOI: 10.1038/Ncomms15540 |
0.772 |
|
| 2016 |
Chen X, Randles L, Shi K, Tarasov SG, Aihara H, Walters KJ. Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure (London, England : 1993). PMID 27396824 DOI: 10.1016/J.Str.2016.05.018 |
0.813 |
|
| 2016 |
Chen X, Walters KJ. (1)H, (15)N, (13)C resonance assignments for Saccharomyces cerevisiae Rad23 UBL domain. Biomolecular Nmr Assignments. PMID 27188292 DOI: 10.1007/s12104-016-9686-7 |
0.426 |
|
| 2016 |
Yu C, Yang Y, Wang X, Guan S, Fang L, Liu F, Walters KJ, Kaiser P, Huang L. Characterization of Dynamic UbR-Proteasome Subcomplexes by In vivo Cross-linking (X) Assisted Bimolecular Tandem Affinity Purification (XBAP) and Label-free Quantitation. Molecular & Cellular Proteomics : McP. PMID 27114451 DOI: 10.1074/Mcp.M116.058271 |
0.508 |
|
| 2016 |
He F, Wollscheid HP, Nowicka U, Biancospino M, Valentini E, Ehlinger A, Acconcia F, Magistrati E, Polo S, Walters KJ. Myosin VI Contains a Compact Structural Motif that Binds to Ubiquitin Chains. Cell Reports. 14: 2683-94. PMID 26971995 DOI: 10.1016/J.Celrep.2016.01.079 |
0.811 |
|
| 2016 |
Shi Y, Chen X, Elsasser S, Stocks BB, Tian G, Lee BH, Shi Y, Zhang N, de Poot SA, Tuebing F, Sun S, Vannoy J, Tarasov SG, Engen JR, Finley D, ... Walters KJ, et al. Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science (New York, N.Y.). 351. PMID 26912900 DOI: 10.1126/Science.Aad9421 |
0.432 |
|
| 2016 |
Randles L, Anchoori RK, Roden RB, Walters KJ. Proteasome Ubiquitin Receptor hRpn13 and its Interacting Deubiquitinating Enzyme Uch37 are Required for Proper Cell Cycle Progression. The Journal of Biological Chemistry. PMID 26907685 DOI: 10.1074/Jbc.M115.694588 |
0.795 |
|
| 2015 |
Nowicka U, Hoffman M, Randles L, Shi X, Khavrutskii L, Stefanisko K, Tarasova NI, Darwin KH, Walters KJ. Mycobacterium tuberculosis copper-regulated protein SocB is an intrinsically disordered protein that folds upon interaction with a synthetic phospholipid bilayer. Proteins. PMID 26650755 DOI: 10.1002/Prot.24970 |
0.764 |
|
| 2015 |
Lu X, Liu F, Durham SE, Tarasov SG, Walters KJ. A High Affinity hRpn2-Derived Peptide That Displaces Human Rpn13 from Proteasome in 293T Cells. Plos One. 10: e0140518. PMID 26466095 DOI: 10.1371/Journal.Pone.0140518 |
0.506 |
|
| 2015 |
Liu F, Koepp DM, Walters KJ. Artificial targeting of misfolded cytosolic proteins to endoplasmic reticulum as a mechanism for clearance. Scientific Reports. 5: 12088. PMID 26168740 DOI: 10.1038/Srep12088 |
0.558 |
|
| 2013 |
Anchoori RK, Karanam B, Peng S, Wang JW, Jiang R, Tanno T, Orlowski RZ, Matsui W, Zhao M, Rudek MA, Hung CF, Chen X, Walters KJ, Roden RB. A bis-benzylidine piperidone targeting proteasome ubiquitin receptor RPN13/ADRM1 as a therapy for cancer. Cancer Cell. 24: 791-805. PMID 24332045 DOI: 10.1016/J.Ccr.2013.11.001 |
0.308 |
|
| 2013 |
Ehlinger A, Walters KJ. Structural insights into proteasome activation by the 19S regulatory particle. Biochemistry. 52: 3618-28. PMID 23672618 DOI: 10.1021/Bi400417A |
0.786 |
|
| 2013 |
Ehlinger A, Park S, Fahmy A, Lary JW, Cole JL, Finley D, Walters KJ. Conformational dynamics of the Rpt6 ATPase in proteasome assembly and Rpn14 binding. Structure (London, England : 1993). 21: 753-65. PMID 23562395 DOI: 10.1016/J.Str.2013.02.021 |
0.808 |
|
| 2012 |
Hennig J, de Vries SJ, Hennig KD, Randles L, Walters KJ, Sunnerhagen M, Bonvin AM. MTMDAT-HADDOCK: high-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometry. Bmc Structural Biology. 12: 29. PMID 23153250 DOI: 10.1186/1472-6807-12-29 |
0.772 |
|
| 2012 |
Randles L, Walters KJ. Ubiquitin and its binding domains. Frontiers in Bioscience (Landmark Edition). 17: 2140-57. PMID 22652769 DOI: 10.2741/4042 |
0.817 |
|
| 2012 |
Chen X, Walters KJ. Identifying and studying ubiquitin receptors by NMR. Methods in Molecular Biology (Clifton, N.J.). 832: 279-303. PMID 22350893 DOI: 10.1007/978-1-61779-474-2_20 |
0.515 |
|
| 2011 |
Liu F, Walters KJ. Policing Parkin with a UblD. The Embo Journal. 30: 2757-8. PMID 21772326 DOI: 10.1038/Emboj.2011.223 |
0.537 |
|
| 2010 |
Chen X, Lee BH, Finley D, Walters KJ. Structure of proteasome ubiquitin receptor hRpn13 and its activation by the scaffolding protein hRpn2. Molecular Cell. 38: 404-15. PMID 20471946 DOI: 10.1016/J.Molcel.2010.04.019 |
0.6 |
|
| 2010 |
Liu F, Walters KJ. Multitasking with ubiquitin through multivalent interactions. Trends in Biochemical Sciences. 35: 352-60. PMID 20181483 DOI: 10.1016/J.Tibs.2010.01.002 |
0.56 |
|
| 2009 |
Zhou X, Zhang N, Liu L, Walters KJ, Hanna PE, Wagner CR. Probing the catalytic potential of the hamster arylamine N-acetyltransferase 2 catalytic triad by site-directed mutagenesis of the proximal conserved residue, Tyr190. The Febs Journal. 276: 6928-41. PMID 19860825 DOI: 10.1111/J.1742-4658.2009.07389.X |
0.397 |
|
| 2009 |
Dikic I, Wakatsuki S, Walters KJ. Ubiquitin-binding domains - from structures to functions. Nature Reviews. Molecular Cell Biology. 10: 659-71. PMID 19773779 DOI: 10.1038/Nrm2767 |
0.583 |
|
| 2009 |
Walters KJ, Chen X. Measuring ubiquitin chain linkage: Rap80 uses a molecular ruler mechanism for ubiquitin linkage specificity. The Embo Journal. 28: 2307-8. PMID 19690555 DOI: 10.1038/Emboj.2009.221 |
0.503 |
|
| 2009 |
Zhang N, Wang Q, Ehlinger A, Randles L, Lary JW, Kang Y, Haririnia A, Storaska AJ, Cole JL, Fushman D, Walters KJ. Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13. Molecular Cell. 35: 280-90. PMID 19683493 DOI: 10.1016/J.Molcel.2009.06.010 |
0.748 |
|
| 2009 |
Chen X, Solomon WC, Kang Y, Cerda-Maira F, Darwin KH, Walters KJ. Prokaryotic ubiquitin-like protein pup is intrinsically disordered. Journal of Molecular Biology. 392: 208-17. PMID 19607839 DOI: 10.1016/J.Jmb.2009.07.018 |
0.697 |
|
| 2009 |
Zhang N, Walters KJ. Insights into how protein dynamics affects arylamine N-acetyltransferase catalysis. Biochemical and Biophysical Research Communications. 385: 395-401. PMID 19463782 DOI: 10.1016/J.Bbrc.2009.05.065 |
0.412 |
|
| 2008 |
Walters KJ, Zhang N. Rpn10 protects the proteasome from Dsk2. Molecular Cell. 32: 459-60. PMID 19026775 DOI: 10.1016/J.Molcel.2008.10.020 |
0.318 |
|
| 2008 |
Sim E, Walters K, Boukouvala S. Arylamine N-acetyltransferases: from structure to function. Drug Metabolism Reviews. 40: 479-510. PMID 18642144 DOI: 10.1080/03602530802186603 |
0.361 |
|
| 2008 |
Schreiner P, Chen X, Husnjak K, Randles L, Zhang N, Elsasser S, Finley D, Dikic I, Walters KJ, Groll M. Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction. Nature. 453: 548-52. PMID 18497827 DOI: 10.1038/Nature06924 |
0.828 |
|
| 2008 |
Husnjak K, Elsasser S, Zhang N, Chen X, Randles L, Shi Y, Hofmann K, Walters KJ, Finley D, Dikic I. Proteasome subunit Rpn13 is a novel ubiquitin receptor. Nature. 453: 481-8. PMID 18497817 DOI: 10.1038/Nature06926 |
0.817 |
|
| 2008 |
Kawamura A, Westwood I, Wakefield L, Long H, Zhang N, Walters K, Redfield C, Sim E. Mouse N-acetyltransferase type 2, the homologue of human N-acetyltransferase type 1. Biochemical Pharmacology. 75: 1550-60. PMID 18280460 DOI: 10.1016/J.Bcp.2007.12.012 |
0.392 |
|
| 2008 |
Goh AM, Walters KJ, Elsasser S, Verma R, Deshaies RJ, Finley D, Howley PM. Components of the ubiquitin-proteasome pathway compete for surfaces on Rad23 family proteins. Bmc Biochemistry. 9: 4. PMID 18234089 DOI: 10.1186/1471-2091-9-4 |
0.562 |
|
| 2007 |
Liu L, Von Vett A, Zhang N, Walters KJ, Wagner CR, Hanna PE. Arylamine N-acetyltransferases: characterization of the substrate specificities and molecular interactions of environmental arylamines with human NAT1 and NAT2. Chemical Research in Toxicology. 20: 1300-8. PMID 17672512 DOI: 10.1021/Tx7001614 |
0.39 |
|
| 2007 |
Kang Y, Chen X, Lary JW, Cole JL, Walters KJ. Defining how ubiquitin receptors hHR23a and S5a bind polyubiquitin. Journal of Molecular Biology. 369: 168-76. PMID 17408689 DOI: 10.1016/J.Jmb.2007.03.008 |
0.672 |
|
| 2007 |
Wang Q, Deloia MA, Kang Y, Litchke C, Zhang N, Titus MA, Walters KJ. The SH3 domain of a M7 interacts with its C-terminal proline-rich region. Protein Science : a Publication of the Protein Society. 16: 189-96. PMID 17189480 DOI: 10.1110/Ps.062496807 |
0.705 |
|
| 2007 |
Ma L, Sham YY, Walters KJ, Towle HC. A critical role for the loop region of the basic helix-loop-helix/leucine zipper protein Mlx in DNA binding and glucose-regulated transcription. Nucleic Acids Research. 35: 35-44. PMID 17148476 DOI: 10.1093/Nar/Gkl987 |
0.467 |
|
| 2007 |
Kang Y, Zhang N, Koepp DM, Walters KJ. Ubiquitin receptor proteins hHR23a and hPLIC2 interact. Journal of Molecular Biology. 365: 1093-101. PMID 17098253 DOI: 10.1016/J.Jmb.2006.10.056 |
0.683 |
|
| 2006 |
Díaz-Martínez LA, Kang Y, Walters KJ, Clarke DJ. Yeast UBL-UBA proteins have partially redundant functions in cell cycle control. Cell Division. 1: 28. PMID 17144915 DOI: 10.1186/1747-1028-1-28 |
0.636 |
|
| 2006 |
Zhang N, Liu L, Liu F, Wagner CR, Hanna PE, Walters KJ. NMR-based model reveals the structural determinants of mammalian arylamine N-acetyltransferase substrate specificity. Journal of Molecular Biology. 363: 188-200. PMID 16959263 DOI: 10.1016/J.Jmb.2006.08.026 |
0.518 |
|
| 2006 |
Liu F, Zhang N, Zhou X, Hanna PE, Wagner CR, Koepp DM, Walters KJ. Arylamine N-acetyltransferase aggregation and constitutive ubiquitylation. Journal of Molecular Biology. 361: 482-92. PMID 16857211 DOI: 10.1016/J.Jmb.2006.06.029 |
0.485 |
|
| 2006 |
Kang Y, Vossler RA, Diaz-Martinez LA, Winter NS, Clarke DJ, Walters KJ. UBL/UBA ubiquitin receptor proteins bind a common tetraubiquitin chain. Journal of Molecular Biology. 356: 1027-35. PMID 16405905 DOI: 10.1016/J.Jmb.2005.12.001 |
0.698 |
|
| 2005 |
Walters KJ. Ufd1 exhibits dual ubiquitin binding modes. Structure (London, England : 1993). 13: 943-4. PMID 16004865 DOI: 10.1016/J.Str.2005.06.001 |
0.451 |
|
| 2005 |
Wang Q, Young P, Walters KJ. Structure of S5a bound to monoubiquitin provides a model for polyubiquitin recognition. Journal of Molecular Biology. 348: 727-39. PMID 15826667 DOI: 10.1016/J.Jmb.2005.03.007 |
0.704 |
|
| 2004 |
Wang Q, Walters KJ. Chemical shift assignments of the (poly)ubiquitin-binding region of the proteasome subunit S5a. Journal of Biomolecular Nmr. 30: 231-2. PMID 15704274 DOI: 10.1023/B:Jnmr.0000048944.73308.6C |
0.59 |
|
| 2004 |
Walters KJ, Goh AM, Wang Q, Wagner G, Howley PM. Ubiquitin family proteins and their relationship to the proteasome: a structural perspective. Biochimica Et Biophysica Acta. 1695: 73-87. PMID 15571810 DOI: 10.1016/J.Bbamcr.2004.10.005 |
0.648 |
|
| 2003 |
Wang Q, Goh AM, Howley PM, Walters KJ. Ubiquitin recognition by the DNA repair protein hHR23a. Biochemistry. 42: 13529-35. PMID 14621999 DOI: 10.1021/Bi035391J |
0.693 |
|
| 2003 |
Walters KJ, Lech PJ, Goh AM, Wang Q, Howley PM. DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a. Proceedings of the National Academy of Sciences of the United States of America. 100: 12694-9. PMID 14557549 DOI: 10.1073/Pnas.1634989100 |
0.667 |
|
| 2002 |
Walters KJ, Kleijnen MF, Goh AM, Wagner G, Howley PM. Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a. Biochemistry. 41: 1767-77. PMID 11827521 DOI: 10.1021/Bi011892Y |
0.525 |
|
| 1997 |
Walters KJ, Dayie KT, Reece RJ, Ptashne M, Wagner G. Structure and mobility of the PUT3 dimer. Nature Structural Biology. 4: 744-50. PMID 9303003 DOI: 10.1038/nsb0997-744 |
0.339 |
|
| 1997 |
Walters KJ, Matsuo H, Wagner G. A Simple Method to Distinguish Intermonomer Nuclear Overhauser Effects in Homodimeric Proteins withC2Symmetry Journal of the American Chemical Society. 119: 5958-5959. DOI: 10.1021/Ja963309K |
0.358 |
|
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