Ross D. King - Publications

Affiliations: 
Computer Sciences University of Wales, Lampeter, Wales, United Kingdom 

60/162 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Grinberg NF, Orhobor OI, King RD. An evaluation of machine-learning for predicting phenotype: studies in yeast, rice, and wheat. Machine Learning. 109: 251-277. PMID 32174648 DOI: 10.1007/S10994-019-05848-5  0.384
2019 Sadawi N, Olier I, Vanschoren J, van Rijn JN, Besnard J, Bickerton R, Grosan C, Soldatova L, King RD. Multi-task learning with a natural metric for quantitative structure activity relationship learning Journal of Cheminformatics. 11. DOI: 10.1186/S13321-019-0392-1  0.336
2018 Olier I, Sadawi N, Bickerton GR, Vanschoren J, Grosan C, Soldatova L, King RD. Meta-QSAR: a large-scale application of meta-learning to drug design and discovery. Machine Learning. 107: 285-311. PMID 31997851 DOI: 10.1007/S10994-017-5685-X  0.327
2017 Currin A, Korovin K, Ababi M, Roper K, Kell DB, Day PJ, King RD. Computing exponentially faster: implementing a non-deterministic universal Turing machine using DNA. Journal of the Royal Society, Interface. 14. PMID 28250099 DOI: 10.1098/Rsif.2016.0990  0.302
2015 Williams K, Bilsland E, Sparkes A, Aubrey W, Young M, Soldatova LN, De Grave K, Ramon J, de Clare M, Sirawaraporn W, Oliver SG, King RD. Cheaper faster drug development validated by the repositioning of drugs against neglected tropical diseases. Journal of the Royal Society, Interface / the Royal Society. 12: 20141289. PMID 25652463 DOI: 10.1098/Rsif.2014.1289  0.32
2014 Soldatova LN, Nadis D, King RD, Basu PS, Haddi E, Baumlé V, Saunders NJ, Marwan W, Rudkin BB. EXACT2: the semantics of biomedical protocols. Bmc Bioinformatics. 15: S5. PMID 25472549 DOI: 10.1186/1471-2105-15-S14-S5  0.313
2014 Zhou F, Toivonen H, King RD. The use of weighted graphs for large-scale genome analysis. Plos One. 9: e89618. PMID 24619061 DOI: 10.1371/Journal.Pone.0089618  0.3
2013 Scott IM, Lin W, Liakata M, Wood JE, Vermeer CP, Allaway D, Ward JL, Draper J, Beale MH, Corol DI, Baker JM, King RD. Merits of random forests emerge in evaluation of chemometric classifiers by external validation. Analytica Chimica Acta. 801: 22-33. PMID 24139571 DOI: 10.1016/J.Aca.2013.09.027  0.311
2013 Soldatova LN, Rzhetsky A, De Grave K, King RD. Representation of probabilistic scientific knowledge. Journal of Biomedical Semantics. 4: S7. PMID 23734675 DOI: 10.1186/2041-1480-4-S1-S7  0.369
2011 Whelan K, Ray O, King RD. Representation, simulation, and hypothesis generation in graph and logical models of biological networks. Methods in Molecular Biology (Clifton, N.J.). 759: 465-82. PMID 21863503 DOI: 10.1007/978-1-61779-173-4_26  0.333
2011 King RD. Rise of the robo scientists. Scientific American. 304: 72-7. PMID 21265330 DOI: 10.1038/Scientificamerican0111-72  0.304
2010 Scott IM, Vermeer CP, Liakata M, Corol DI, Ward JL, Lin W, Johnson HE, Whitehead L, Kular B, Baker JM, Walsh S, Dave A, Larson TR, Graham IA, Wang TL, ... King RD, et al. Enhancement of plant metabolite fingerprinting by machine learning. Plant Physiology. 153: 1506-20. PMID 20566707 DOI: 10.1104/Pp.109.150524  0.335
2010 Qi D, King RD, Hopkins AL, Bickerton GR, Soldatova LN. An ontology for description of drug discovery investigations. Journal of Integrative Bioinformatics. 7. PMID 20375446 DOI: 10.2390/Biecoll-Jib-2010-126  0.301
2010 Sparkes A, Aubrey W, Byrne E, Clare A, Khan MN, Liakata M, Markham M, Rowland J, Soldatova LN, Whelan KE, Young M, King RD. Towards Robot Scientists for autonomous scientific discovery. Automated Experimentation. 2: 1. PMID 20119518 DOI: 10.1186/1759-4499-2-1  0.322
2009 King RD, Rowland J, Oliver SG, Young M, Aubrey W, Byrne E, Liakata M, Markham M, Pir P, Soldatova LN, Sparkes A, Whelan KE, Clare A. The automation of science. Science (New York, N.Y.). 324: 85-9. PMID 19342587 DOI: 10.1126/Science.1165620  0.353
2008 Whelan KE, King RD. Using a logical model to predict the growth of yeast. Bmc Bioinformatics. 9: 97. PMID 18269749 DOI: 10.1186/1471-2105-9-97  0.344
2008 Coghill GM, Srinivasan A, King RD. Qualitative system identification from imperfect data Journal of Artificial Intelligence Research. 32: 825-877. DOI: 10.1613/Jair.2374  0.34
2008 Srinivasan A, King RD. Incremental Identification of Qualitative Models of Biological Systems using Inductive Logic Programming Journal of Machine Learning Research. 9: 1475-1533. DOI: 10.1145/1390681.1442781  0.336
2007 Buttingsrud B, King RD, Alsberg BK. An alignment-free methodology for modelling field-based 3D-structure activity relationships using inductive logic programming Journal of Chemometrics. 21: 509-519. DOI: 10.1002/Cem.1056  0.395
2006 Buttingsrud B, Ryeng E, King RD, Alsberg BK. Representation of molecular structure using quantum topology with inductive logic programming in structure-activity relationships. Journal of Computer-Aided Molecular Design. 20: 361-73. PMID 17054018 DOI: 10.1007/S10822-006-9058-Y  0.348
2006 Ferré S, King RD. Finding motifs in protein secondary structure for use in function prediction. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 13: 719-31. PMID 16706721 DOI: 10.1089/Cmb.2006.13.719  0.376
2006 Clare A, Karwath A, Ougham H, King RD. Functional bioinformatics for Arabidopsis thaliana. Bioinformatics (Oxford, England). 22: 1130-6. PMID 16481336 DOI: 10.1093/Bioinformatics/Btl169  0.391
2005 King RD, Garrett SM, Coghill GM. On the use of qualitative reasoning to simulate and identify metabolic pathways. Bioinformatics (Oxford, England). 21: 2017-26. PMID 15647297 DOI: 10.1093/Bioinformatics/Bti255  0.351
2004 Whelan KE, King RD. Intelligent software for laboratory automation. Trends in Biotechnology. 22: 440-5. PMID 15331223 DOI: 10.1016/J.Tibtech.2004.07.010  0.314
2004 King RD, Wise PH, Clare A. Confirmation of data mining based predictions of protein function. Bioinformatics (Oxford, England). 20: 1110-8. PMID 14764546 DOI: 10.1093/Bioinformatics/Bth047  0.398
2004 King RD, Whelan KE, Jones FM, Reiser PG, Bryant CH, Muggleton SH, Kell DB, Oliver SG. Functional genomic hypothesis generation and experimentation by a robot scientist. Nature. 427: 247-52. PMID 14724639 DOI: 10.1038/Nature02236  0.335
2004 King RD. Applying inductive logic programming to predicting gene function Ai Magazine. 25: 57-68. DOI: 10.1609/Aimag.V25I1.1747  0.411
2003 Toivonen H, Srinivasan A, King RD, Kramer S, Helma C. Statistical evaluation of the Predictive Toxicology Challenge 2000-2001. Bioinformatics (Oxford, England). 19: 1183-93. PMID 12835260 DOI: 10.1093/Bioinformatics/Btg130  0.373
2002 Karwath A, King RD. Homology induction: the use of machine learning to improve sequence similarity searches. Bmc Bioinformatics. 3: 11. PMID 11972320 DOI: 10.1186/1471-2105-3-11  0.372
2002 Clare A, King RD. Machine learning of functional class from phenotype data. Bioinformatics (Oxford, England). 18: 160-6. PMID 11836224 DOI: 10.1093/Bioinformatics/18.1.160  0.39
2002 Marchand-Geneste N, Watson KA, Alsberg BK, King RD. New approach to pharmacophore mapping and QSAR analysis using inductive logic programming. Application to thermolysin inhibitors and glycogen phosphorylase B inhibitors. Journal of Medicinal Chemistry. 45: 399-409. PMID 11784144 DOI: 10.1021/Jm0155244  0.38
2001 King RD, Karwath A, Clare A, Dehaspe L. The utility of different representations of protein sequence for predicting functional class. Bioinformatics (Oxford, England). 17: 445-54. PMID 11331239 DOI: 10.1093/Bioinformatics/17.5.445  0.372
2001 King RD, Srinivasan A, Dehaspe L. Warmr: a data mining tool for chemical data. Journal of Computer-Aided Molecular Design. 15: 173-81. PMID 11272703 DOI: 10.1023/A:1008171016861  0.388
2001 Helma C, King RD, Kramer S, Srinivasan A. The predictive toxicology challenge 2000-2001 Bioinformatics. 17: 107-108. DOI: 10.1093/Bioinformatics/17.1.107  0.342
2000 King RD, Karwath A, Clare A, Dehaspe L. Accurate prediction of protein functional class from sequence in the Mycobacterium tuberculosis and Escherichia coli genomes using data mining. Yeast (Chichester, England). 17: 283-93. PMID 11119305 DOI: 10.1002/1097-0061(200012)17:4<283::Aid-Yea52>3.0.Co;2-F  0.365
2000 Ouali M, King RD. Cascaded multiple classifiers for secondary structure prediction. Protein Science : a Publication of the Protein Society. 9: 1162-76. PMID 10892809 DOI: 10.1110/Ps.9.6.1162  0.374
2000 King RD, Ouali M, Strong AT, Aly A, Elmaghraby A, Kantardzic M, Page D. Is it better to combine predictions? Protein Engineering. 13: 15-9. PMID 10679525 DOI: 10.1093/Protein/13.1.15  0.363
2000 Kell DB, King RD. On the optimization of classes for the assignment of unidentified reading frames in functional genomics programmes: the need for machine learning. Trends in Biotechnology. 18: 93-8. PMID 10675895 DOI: 10.1016/S0167-7799(99)01407-9  0.347
2000 Alsberg BK, Marchand-Geneste N, King RD. A new 3D molecular structure representation using quantum topology with application to structure–property relationships Chemometrics and Intelligent Laboratory Systems. 54: 75-91. DOI: 10.1016/S0169-7439(00)00101-5  0.347
1999 Srinivasan A, King RD. Feature construction with Inductive Logic Programming: A Study of Quantitative Predictions of Biological Activity Aided by Structural Attributes Data Mining and Knowledge Discovery. 3: 37-57. DOI: 10.1023/A:1009815821645  0.371
1998 King RD. Drug design, protein secondary structure prediction and functional genomics Acm Sigbio Newsletter. 18: 5-5. DOI: 10.1145/956034.956040  0.376
1997 King RD, Srinivasan A. The discovery of indicator variables for QSAR using inductive logic programming. Journal of Computer-Aided Molecular Design. 11: 571-80. PMID 9491349 DOI: 10.1023/A:1007967728701  0.362
1997 King RD, Saqi M, Sayle R, Sternberg MJ. DSC: public domain protein secondary structure predication. Computer Applications in the Biosciences : Cabios. 13: 473-4. PMID 9283763 DOI: 10.1093/Bioinformatics/13.4.473  0.359
1996 King RD, Srinivasan A. Prediction of rodent carcinogenicity bioassays from molecular structure using inductive logic programming. Environmental Health Perspectives. 104: 1031-40. PMID 8933051 DOI: 10.1289/Ehp.96104S51031  0.391
1996 King RD, Sternberg MJ. Identification and application of the concepts important for accurate and reliable protein secondary structure prediction. Protein Science : a Publication of the Protein Society. 5: 2298-310. PMID 8931148 DOI: 10.1002/Pro.5560051116  0.38
1996 King RD, Muggleton SH, Srinivasan A, Sternberg MJ. Structure-activity relationships derived by machine learning: the use of atoms and their bond connectivities to predict mutagenicity by inductive logic programming. Proceedings of the National Academy of Sciences of the United States of America. 93: 438-42. PMID 8552655 DOI: 10.1073/Pnas.93.1.438  0.363
1996 Srinivasan A, Muggleton SH, Sternberg MJE, King RD. Theories for mutagenicity: a study in first-order and feature-based induction Artificial Intelligence. 85: 277-299. DOI: 10.1016/0004-3702(95)00122-0  0.364
1995 King RD, Feng C, Sutherland A. Statlog: Comparison Of Classification Algorithms On Large Real-World Problems Applied Artificial Intelligence. 9: 289-333. DOI: 10.1080/08839519508945477  0.305
1995 King RD, Hirst JD, Sternberg MJE. Comparison of artificial intelligence methods for modeling pharmaceutical QSARS Applied Artificial Intelligence. 9: 213-233. DOI: 10.1080/08839519508945474  0.381
1995 King RD, Sternberg MJE, Srinivasan A. Relating chemical activity to structure: An examination of ILP successes New Generation Computing. 13: 411-433. DOI: 10.1007/Bf03037220  0.37
1994 Hirst JD, King RD, Sternberg MJ. Quantitative structure-activity relationships by neural networks and inductive logic programming. I. The inhibition of dihydrofolate reductase by pyrimidines. Journal of Computer-Aided Molecular Design. 8: 405-20. PMID 7815092 DOI: 10.1007/Bf00125375  0.352
1994 Sternberg MJ, King RD, Lewis RA, Muggleton S. Application of machine learning to structural molecular biology. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 344: 365-71. PMID 7800706 DOI: 10.1098/Rstb.1994.0075  0.415
1994 King RD, Clark DA, Shirazi J, Sternberg MJ. On the use of machine learning to identify topological rules in the packing of beta-strands. Protein Engineering. 7: 1295-303. PMID 7700861 DOI: 10.1093/Protein/7.11.1295  0.32
1994 Bratko I, King R. Applications of inductive logic programming Intelligence\/Sigart Bulletin. 5: 43-49. DOI: 10.1145/181668.181678  0.334
1993 King RD, Hirst JD, Sternberg MJE. New approaches to QSAR: Neural networks and machine learning Perspectives in Drug Discovery and Design. 1: 279-290. DOI: 10.1007/Bf02174529  0.33
1992 Schulze-Kremer S, King RD. IPSA-Inductive Protein Structure Analysis. Protein Engineering. 5: 377-90. PMID 1518785 DOI: 10.1093/Protein/5.5.377  0.333
1992 Muggleton S, King RD, Sternberg MJ. Protein secondary structure prediction using logic-based machine learning. Protein Engineering. 5: 647-57. PMID 1480619 DOI: 10.1093/Protein/5.7.647  0.398
1992 King RD, Muggleton S, Lewis RA, Sternberg MJ. Drug design by machine learning: the use of inductive logic programming to model the structure-activity relationships of trimethoprim analogues binding to dihydrofolate reductase. Proceedings of the National Academy of Sciences of the United States of America. 89: 11322-6. PMID 1454814 DOI: 10.1073/Pnas.89.23.11322  0.381
1992 Sternberg MJ, Lewis RA, King RD, Muggleton S. Modelling the structure and function of enzymes by machine learning. Faraday Discussions. 269-80. PMID 1290938 DOI: 10.1039/Fd9929300269  0.407
1990 King RD, Sternberg MJ. Machine learning approach for the prediction of protein secondary structure. Journal of Molecular Biology. 216: 441-57. PMID 2254939 DOI: 10.1016/S0022-2836(05)80333-X  0.364
Low-probability matches (unlikely to be authored by this person)
2016 Grinberg NF, Lovatt A, Hegarty M, Lovatt A, Skøt KP, Kelly R, Blackmore T, Thorogood D, King RD, Armstead I, Powell W, Skøt L. Implementation of Genomic Prediction in Lolium perenne (L.) Breeding Populations. Frontiers in Plant Science. 7: 133. PMID 26904088 DOI: 10.3389/Fpls.2016.00133  0.299
2006 Soldatova LN, King RD. An ontology of scientific experiments. Journal of the Royal Society, Interface / the Royal Society. 3: 795-803. PMID 17015305 DOI: 10.1098/Rsif.2006.0134  0.298
2003 Clare A, King RD. Predicting gene function in Saccharomyces cerevisiae. Bioinformatics (Oxford, England). 19: ii42-9. PMID 14534170  0.296
2006 Soldatova LN, Clare A, Sparkes A, King RD. An ontology for a Robot Scientist. Bioinformatics (Oxford, England). 22: e464-71. PMID 16873508 DOI: 10.1093/Bioinformatics/Btl207  0.292
2007 Riley MC, Clare A, King RD. Locational distribution of gene functional classes in Arabidopsis thaliana. Bmc Bioinformatics. 8: 112. PMID 17397552 DOI: 10.1186/1471-2105-8-112  0.287
2007 Schierz AC, Soldatova LN, King RD. Overhauling the PDB. Nature Biotechnology. 25: 437-42. PMID 17420753 DOI: 10.1038/Nbt0407-437  0.286
2011 Liu Y, Aubrey W, Martin K, Sparkes A, Lu C, King RD. The analysis of yeast cell morphology features in exponential and stationary phase Journal of Biological Systems. 19: 561-575. DOI: 10.1142/S0218339011003968  0.285
1996 King RD, Angus CG. PM—Protein music Bioinformatics. 12: 251-252. DOI: 10.1093/Bioinformatics/12.3.251  0.283
2011 King RD, Liakata M, Lu C, Oliver SG, Soldatova LN. On the formalization and reuse of scientific research. Journal of the Royal Society, Interface / the Royal Society. 8: 1440-8. PMID 21490004 DOI: 10.1098/Rsif.2011.0029  0.28
2009 King RD, Rowland J, Oliver SG, Young M, Aubrey W, Byrne E, Liakata M, Markham M, Pir P, Soldatova LN, Sparkes A, Whelan KE, Clare A. Make way for robot scientists. Science (New York, N.Y.). 325: 945. PMID 19696334 DOI: 10.1126/Science.325_945A  0.28
2005 Catchpole GS, Beckmann M, Enot DP, Mondhe M, Zywicki B, Taylor J, Hardy N, Smith A, King RD, Kell DB, Fiehn O, Draper J. Hierarchical metabolomics demonstrates substantial compositional similarity between genetically modified and conventional potato crops. Proceedings of the National Academy of Sciences of the United States of America. 102: 14458-62. PMID 16186495 DOI: 10.1073/Pnas.0503955102  0.279
2018 King RD, Costa VS, Mellingwood C, Soldatova LN. Automating Sciences: Philosophical and Social Dimensions Ieee Technology and Society Magazine. 37: 40-46. DOI: 10.1109/Mts.2018.2795097  0.276
2001 Alsberg BK, Marchand-Geneste N, King RD. Modeling quantitative structure-property relationships in calculated reaction pathways using a new 3D quantum topological representation Analytica Chimica Acta. 446: 3-13. DOI: 10.1016/S0003-2670(01)00984-9  0.276
2015 Zhou F, Claire Q, King RD. Predicting the Geographical Origin of Music Proceedings - Ieee International Conference On Data Mining, Icdm. 2015: 1115-1120. DOI: 10.1109/ICDM.2014.73  0.275
2015 Aubrey W, Riley MC, Young M, King RD, Oliver SG, Clare A. A Tool for Multiple Targeted Genome Deletions that Is Precise, Scar-Free, and Suitable for Automation. Plos One. 10: e0142494. PMID 26630677 DOI: 10.1371/Journal.Pone.0142494  0.273
2010 Dobson PD, Smallbone K, Jameson D, Simeonidis E, Lanthaler K, Pir P, Lu C, Swainston N, Dunn WB, Fisher P, Hull D, Brown M, Oshota O, Stanford NJ, Kell DB, ... King RD, et al. Further developments towards a genome-scale metabolic model of yeast. Bmc Systems Biology. 4: 145. PMID 21029416 DOI: 10.1186/1752-0509-4-145  0.272
2022 Al Taweraqi N, King RD. Improved prediction of gene expression through integrating cell signalling models with machine learning. Bmc Bioinformatics. 23: 323. PMID 35933367 DOI: 10.1186/s12859-022-04787-8  0.269
2011 Bilsland E, Pir P, Gutteridge A, Johns A, King RD, Oliver SG. Functional expression of parasite drug targets and their human orthologs in yeast. Plos Neglected Tropical Diseases. 5: e1320. PMID 21991399 DOI: 10.1371/Journal.Pntd.0001320  0.266
2013 King RD. Semantic technologies for the automation of research in biomedicine Embnet.Journal. 19: 13. DOI: 10.14806/Ej.19.B.743  0.266
2021 Olier I, Orhobor OI, Dash T, Davis AM, Soldatova LN, Vanschoren J, King RD. Transformational machine learning: Learning how to learn from many related scientific problems. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34845013 DOI: 10.1073/pnas.2108013118  0.265
2005 Soldatova LN, King RD. Are the current ontologies in biology good ontologies? Nature Biotechnology. 23: 1095-8. PMID 16151402 DOI: 10.1038/Nbt0905-1095  0.259
2009 King RD, Rowland J, Aubrey W, Liakata M, Markham M, Soldatova LN, Whelan KE, Clare A, Young M, Sparkes A, Oliver SG, Pir P. The robot scientist adam Computer. 42: 46-54. DOI: 10.1109/Mc.2009.270  0.257
2013 Bilsland E, Sparkes A, Williams K, Moss HJ, de Clare M, Pir P, Rowland J, Aubrey W, Pateman R, Young M, Carrington M, King RD, Oliver SG. Yeast-based automated high-throughput screens to identify anti-parasitic lead compounds. Open Biology. 3: 120158. PMID 23446112 DOI: 10.1098/Rsob.120158  0.254
2009 Lu C, King RD. An investigation into the population abundance distribution of mRNAs, proteins, and metabolites in biological systems. Bioinformatics (Oxford, England). 25: 2020-7. PMID 19535531 DOI: 10.1093/Bioinformatics/Btp360  0.253
2014 King RD, Lu C. An investigation into eukaryotic pseudouridine synthases. Journal of Bioinformatics and Computational Biology. 12: 1450015. PMID 25152040 DOI: 10.1142/S0219720014500152  0.248
2010 Sparkes A, King RD, Aubrey W, Benway M, Byrne E, Clare A, Liakata M, Markham M, Whelan KE, Young M, Rowland J. An Integrated Laboratory Robotic System for Autonomous Discovery of Gene Function Jala - Journal of the Association For Laboratory Automation. 15: 33-40. DOI: 10.1016/J.Jala.2009.10.001  0.248
1994 Hirst JD, King RD, Sternberg MJ. Quantitative structure-activity relationships by neural networks and inductive logic programming. II. The inhibition of dihydrofolate reductase by triazines. Journal of Computer-Aided Molecular Design. 8: 421-32. PMID 7815093 DOI: 10.1007/BF00125376  0.237
2023 Brunnsåker D, Reder GK, Soni NK, Savolainen OI, Gower AH, Tiukova IA, King RD. High-throughput metabolomics for the design and validation of a diauxic shift model. Npj Systems Biology and Applications. 9: 11. PMID 37029131 DOI: 10.1038/s41540-023-00274-9  0.223
2024 Brunnsåker D, Kronström F, Tiukova IA, King RD. Interpreting protein abundance in Saccharomyces cerevisiae through relational learning. Bioinformatics (Oxford, England). PMID 38273672 DOI: 10.1093/bioinformatics/btae050  0.222
2018 Bilsland E, van Vliet L, Williams K, Feltham J, Carrasco MP, Fotoran WL, Cubillos EFG, Wunderlich G, Grøtli M, Hollfelder F, Jackson V, King RD, Oliver SG. Plasmodium dihydrofolate reductase is a second enzyme target for the antimalarial action of triclosan. Scientific Reports. 8: 1038. PMID 29348637 DOI: 10.1038/S41598-018-19549-X  0.22
2018 King RD, Courtney P. Dilemma over AI and drug patenting already under debate. Nature. 560: 307. PMID 30108355 DOI: 10.1038/D41586-018-05955-8  0.218
2019 Sadawi N, Olier I, Vanschoren J, van Rijn JN, Besnard J, Bickerton R, Grosan C, Soldatova L, King RD. Multi-task learning with a natural metric for quantitative structure activity relationship learning. Journal of Cheminformatics. 11: 68. PMID 33430958 DOI: 10.1186/s13321-019-0392-1  0.217
2023 Reder GK, Gower AH, Kronström F, Halle R, Mahamuni V, Patel A, Hayatnagarkar H, Soldatova LN, King RD. Genesis-DB: a database for autonomous laboratory systems. Bioinformatics Advances. 3: vbad102. PMID 37600845 DOI: 10.1093/bioadv/vbad102  0.214
2022 Orhobor OI, Rehim AA, Lou H, Ni H, King RD. A simple spatial extension to the extended connectivity interaction features for binding affinity prediction. Royal Society Open Science. 9: 211745. PMID 35573039 DOI: 10.1098/rsos.211745  0.209
2019 Coutant A, Roper K, Trejo-Banos D, Bouthinon D, Carpenter M, Grzebyta J, Santini G, Soldano H, Elati M, Ramon J, Rouveirol C, Soldatova LN, King RD. Closed-loop cycles of experiment design, execution, and learning accelerate systems biology model development in yeast. Proceedings of the National Academy of Sciences of the United States of America. PMID 31420515 DOI: 10.1073/pnas.1900548116  0.208
2021 Wang K, Stevens R, Alachram H, Li Y, Soldatova L, King R, Ananiadou S, Schoene AM, Li M, Christopoulou F, Ambite JL, Matthew J, Garg S, Hermjakob U, Marcu D, et al. NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding. Npj Systems Biology and Applications. 7: 38. PMID 34671039 DOI: 10.1038/s41540-021-00200-x  0.207
2017 King RD. Intercept: the secret history of computers and spies Intelligence & National Security. 32: 875-878. DOI: 10.1080/02684527.2016.1262503  0.2
2000 Lytras GN, King RD, Ledward DA. Prediction of the soluble myoglobin content of cooked burgers. Meat Science. 55: 247-50. PMID 22061091  0.195
2009 King RD. An interview with Ross D. King, Ph.D. (by Vicki Glaser). Assay and Drug Development Technologies. 7: 329-33. PMID 19689203 DOI: 10.1089/Adt.2009.0704.Pr  0.18
1994 King RD, Clark DA, Shirazi J, Sternberg MJ. Inductive logic programming used to discover topological constraints in protein structures. Proceedings / ... International Conference On Intelligent Systems For Molecular Biology ; Ismb. International Conference On Intelligent Systems For Molecular Biology. 2: 219-26. PMID 7584394  0.177
2002 Taylor J, King RD, Altmann T, Fiehn O. Application of metabolomics to plant genotype discrimination using statistics and machine learning. Bioinformatics (Oxford, England). 18: S241-8. PMID 12386008  0.156
2023 Abdel-Rehim A, Orhobor O, Hang L, Ni H, King RD. Protein-ligand binding affinity prediction exploiting sequence constituent homology. Bioinformatics (Oxford, England). 39. PMID 37572302 DOI: 10.1093/bioinformatics/btad502  0.152
2008 Soldatova LN, Aubrey W, King RD, Clare A. The EXACT description of biomedical protocols. Bioinformatics (Oxford, England). 24: i295-303. PMID 18586727 DOI: 10.1093/bioinformatics/btn156  0.151
2022 Roper K, Abdel-Rehim A, Hubbard S, Carpenter M, Rzhetsky A, Soldatova L, King RD. Testing the reproducibility and robustness of the cancer biology literature by robot. Journal of the Royal Society, Interface. 19: 20210821. PMID 35382578 DOI: 10.1098/rsif.2021.0821  0.146
2024 Reder GK, Bjurström EY, Brunnsåker D, Kronström F, Lasin P, Tiukova I, Savolainen OI, Dodds JN, May JC, Wikswo JP, McLean JA, King RD. AutonoMS: Automated Ion Mobility Metabolomic Fingerprinting. Journal of the American Society For Mass Spectrometry. PMID 38310603 DOI: 10.1021/jasms.3c00396  0.145
2002 Clare A, King RD. How well do we understand the clusters found in microarray data? In Silico Biology. 2: 511-22. PMID 12611631  0.138
2021 Alalam H, Sigurdardóttir S, Bourgard C, Tiukova I, King RD, Grøtli M, Sunnerhagen P. A Genetic Trap in Yeast for Inhibitors of SARS-CoV-2 Main Protease. Msystems. e0108721. PMID 34812651 DOI: 10.1128/mSystems.01087-21  0.136
2014 Singh N, Fletcher PT, Preston JS, King RD, Marron JS, Weiner MW, Joshi S. Quantifying anatomical shape variations in neurological disorders. Medical Image Analysis. 18: 616-33. PMID 24667299 DOI: 10.1016/J.Media.2014.01.001  0.135
2022 Bellamy H, Rehim AA, Orhobor OI, King R. Batched Bayesian Optimization for Drug Design in Noisy Environments. Journal of Chemical Information and Modeling. 62: 3970-3981. PMID 36044048 DOI: 10.1021/acs.jcim.2c00602  0.127
2001 King RD. Description of a growth simulation model for predicting the effect of diet on broiler composition and growth. Poultry Science. 80: 245-53. PMID 11261551  0.109
2021 Pham L, Phan H, Schindler A, King R, Mertins A, McLoughlin I. Inception-Based Network and Multi-Spectrogram Ensemble Applied To Predict Respiratory Anomalies and Lung Diseases. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2021: 253-256. PMID 34891284 DOI: 10.1109/EMBC46164.2021.9629857  0.093
2002 Montague PR, Berns GS, Cohen JD, McClure SM, Pagnoni G, Dhamala M, Wiest MC, Karpov I, King RD, Apple N, Fisher RE. Hyperscanning: simultaneous fMRI during linked social interactions. Neuroimage. 16: 1159-64. PMID 12202103 DOI: 10.1006/Nimg.2002.1150  0.091
2021 Davern M, Donlon NE, Power R, Hayes C, King R, Dunne MR, Reynolds JV. The tumour immune microenvironment in oesophageal cancer. British Journal of Cancer. PMID 33903730 DOI: 10.1038/s41416-021-01331-y  0.088
2010 King RD, Brown B, Hwang M, Jeon T, George AT. Fractal dimension analysis of the cortical ribbon in mild Alzheimer's disease. Neuroimage. 53: 471-9. PMID 20600974 DOI: 10.1016/j.neuroimage.2010.06.050  0.085
2009 King RD, George AT, Jeon T, Hynan LS, Youn TS, Kennedy DN, Dickerson B. Characterization of Atrophic Changes in the Cerebral Cortex Using Fractal Dimensional Analysis. Brain Imaging and Behavior. 3: 154-166. PMID 20740072 DOI: 10.1007/S11682-008-9057-9  0.079
1998 King RD. Linear model of nitrogen balance and examination of the nature of true metabolisable energy and its nitrogen corrected form. British Poultry Science. 39: 70-8. PMID 9568302 DOI: 10.1080/00071669889420  0.07
1995 King RD. Starting up a quality improvement program. Provider (Washington, D.C.). 21: 87-8. PMID 10143794  0.067
2000 Wiest MC, Eagleman DM, King RD, Montague PR. Dendritic spikes and their influence on extracellular calcium signaling. Journal of Neurophysiology. 83: 1329-37. PMID 10712460 DOI: 10.1152/Jn.2000.83.3.1329  0.067
1996 Person C, Egelman DM, King RD, Montague PR. Three-dimensional synaptic distributions influence neural processing through the resource consumption principle. Journal of Physiology, Paris. 90: 323-5. PMID 9089502 DOI: 10.1016/S0928-4257(97)87908-9  0.062
2001 El-Behissy EY, King RD, Ahmed MM, Youssef AM. Fate of postharvest-applied dichlorvos in stored and processed dates. Journal of Agricultural and Food Chemistry. 49: 1239-45. PMID 11312843  0.06
1998 Geileskey A, King RD, Corte D, Pinto P, Ledward DA. The kinetics of cooked meat haemoprotein formation in meat and model systems. Meat Science. 48: 189-99. PMID 22063067  0.058
2014 Smillie SJ, King R, Kodji X, Outzen E, Pozsgai G, Fernandes E, Marshall N, de Winter P, Heads RJ, Dessapt-Baradez C, Gnudi L, Sams A, Shah AM, Siow RC, Brain SD. An ongoing role of α-calcitonin gene-related peptide as part of a protective network against hypertension, vascular hypertrophy, and oxidative stress. Hypertension. 63: 1056-62. PMID 24516108 DOI: 10.1161/HYPERTENSIONAHA.113.02517  0.058
2019 Arokiasamy S, King R, Boulaghrasse H, Poston RN, Nourshargh S, Wang W, Voisin MB. Heparanase-Dependent Remodeling of Initial Lymphatic Glycocalyx Regulates Tissue-Fluid Drainage During Acute Inflammation . Frontiers in Immunology. 10: 2316. PMID 31636638 DOI: 10.3389/fimmu.2019.02316  0.057
2021 King R, Hayes C, Donohoe CL, Dunne MR, Davern M, Donlon NE. Hypoxia and its impact on the tumour microenvironment of gastroesophageal cancers. World Journal of Gastrointestinal Oncology. 13: 312-331. PMID 34040696 DOI: 10.4251/wjgo.v13.i5.312  0.057
2008 King RD. Conservatism, institutionalism, and the social control of intergroup conflict. Ajs; American Journal of Sociology. 113: 1351-93. PMID 18831129 DOI: 10.1086/525511  0.054
1988 Mahomed Y, King RD, Zipes DP, Miles WM, Prystowsky EN, Heger JJ, Brown JW. Surgical division of Wolff-Parkinson-White pathways utilizing the closed-heart technique: a 2-year experience in 47 patients. The Annals of Thoracic Surgery. 45: 495-504. PMID 3365040  0.053
2001 King RD, Wiest MC, Montague PR. Extracellular calcium depletion as a mechanism of short-term synaptic depression. Journal of Neurophysiology. 85: 1952-9. PMID 11353012 DOI: 10.1152/Jn.2001.85.5.1952  0.052
1996 King RD. The 'Fulcrum for Quality'. The physics of provider reform: six key variables to achieve 'MEDQIC'. Medical Group Management Journal / Mgma. 43: 40, 42, 44-7. PMID 10154121  0.049
2010 Tawil I, Gonda JM, King RD, Marinaro JL, Crandall CS. Impact of positive pressure ventilation on thoracostomy tube removal. The Journal of Trauma. 68: 818-21. PMID 19826311 DOI: 10.1097/TA.0b013e3181a5973c  0.048
1996 King RD, Angus CG. PM--protein music. Computer Applications in the Biosciences : Cabios. 12: 251-2. PMID 8872396  0.048
1995 King RD. Are provider integrated delivery systems the final step to integration? Medical Group Management Journal / Mgma. 42: 14-6. PMID 10144806  0.047
2017 Rozenblat V, Ryan J, Wertheim EH, King R, Olsson CA, Krug I. Investigating Direct Links between Depression, Emotional Control, and Physical Punishment with Adolescent Drive for Thinness and Bulimic Behaviors, Including Possible Moderation by the Serotonin Transporter 5-HTTLPR Polymorphism. Frontiers in Psychology. 8: 1361. PMID 28848475 DOI: 10.3389/fpsyg.2017.01361  0.045
1986 Raess DH, Mahomed Y, Brown JW, King RD. Lesser saphenous vein as an alternative conduit of choice in coronary bypass operations. The Annals of Thoracic Surgery. 41: 334-6. PMID 3485416  0.043
2021 Donlon NE, Davern M, Sheppard A, Power R, O'Connell F, Heeran AB, King R, Hayes C, Bhardwaj A, Phelan JJ, Dunne MR, Ravi N, Donohoe CL, O'Sullivan J, Reynolds JV, et al. The Prognostic Value of the Lymph Node in Oesophageal Adenocarcinoma; Incorporating Clinicopathological and Immunological Profiling. Cancers. 13. PMID 34439160 DOI: 10.3390/cancers13164005  0.043
2000 King RD, Gaines LS, Lambert EW, Summerfelt WT, Bickman L. The co-occurrence of psychiatric and substance use diagnoses in adolescents in different service systems: frequency, recognition, cost, and outcomes. The Journal of Behavioral Health Services & Research. 27: 417-30. PMID 11070635 DOI: 10.1007/Bf02287823  0.04
2018 Bouguettaya A, Cruwys T, Moulding R, King R, Bliuc AM. Evidence That Frame of Reference Effects Can Reduce Socially Prescribed Perfectionism. Frontiers in Psychology. 9: 2703. PMID 30687167 DOI: 10.3389/Fpsyg.2018.02703  0.04
2022 Casey K, King R, Banner J, Fuller-Tyszkiewicz M. Romantic relationship quality and functioning for individuals with clinical and sub-clinical social anxiety: a scoping review. Journal of Mental Health (Abingdon, England). 1-29. PMID 35786177 DOI: 10.1080/09638237.2022.2091755  0.039
2022 Davern M, Donlon NE, O'Connell F, Gaughan C, O'Donovan C, McGrath J, Sheppard AD, Hayes C, King R, Temperley H, MacLean M, Bulter C, Bhardwaj A, Moore J, Donohoe C, et al. Nutrient deprivation and hypoxia alter T cell immune checkpoint expression: potential impact for immunotherapy. Journal of Cancer Research and Clinical Oncology. PMID 36445478 DOI: 10.1007/s00432-022-04440-0  0.038
1992 Mahomed Y, King RD, Zipes D, Miles WM, Klein LS, Brown JW. Surgery for atrioventricular node reentry tachycardia. Results with surgical skeletonization of the atrioventricular node and discrete perinodal cryosurgery. The Journal of Thoracic and Cardiovascular Surgery. 104: 1035-44. PMID 1405661  0.037
1998 Egelman DM, King RD, Montague PR. Interaction of nitric oxide and external calcium fluctuations: a possible substrate for rapid information retrieval. Progress in Brain Research. 118: 199-211. PMID 9932443  0.036
1991 Kesler KA, Sharp TG, King RD, Mahomed Y, Brown JW. Surgical myocardial revascularization for the 1990s. Indiana Medicine : the Journal of the Indiana State Medical Association. 84: 616-8. PMID 1940297  0.036
2000 King RD, Wiest MC, Montague PR, Eagleman DM. Do extracellular Ca2+ signals carry information through neural tissue? Trends in Neurosciences. 23: 12-3. PMID 10631782 DOI: 10.1016/S0166-2236(99)01516-7  0.035
2010 Warner MA, Youn TS, Davis T, Chandra A, Marquez de la Plata C, Moore C, Harper C, Madden CJ, Spence J, McColl R, Devous M, King RD, Diaz-Arrastia R. Regionally selective atrophy after traumatic axonal injury. Archives of Neurology. 67: 1336-44. PMID 20625067 DOI: 10.1001/Archneurol.2010.149  0.033
2005 Chang YJ, Jiang M, Lubinski JM, King RD, Friedman HM. Implications for herpes simplex virus vaccine strategies based on antibodies produced to herpes simplex virus type 1 glycoprotein gC immune evasion domains. Vaccine. 23: 4658-65. PMID 15936852 DOI: 10.1016/j.vaccine.2005.04.034  0.032
1993 Krause PC, Rardon DP, Miles WM, Klein LS, Mahomed Y, King RD, Zipes DP. Characteristics of Ca(2+)-activated K+ channels isolated from the left ventricle of a patient with idiopathic long QT syndrome. American Heart Journal. 126: 1134-41. PMID 8237756 DOI: 10.1016/0002-8703(93)90665-V  0.032
1987 Markand ON, Lee BI, Warren C, Stoelting RK, King RD, Brown JW, Mahomed Y. Effects of hypothermia on brainstem auditory evoked potentials in humans. Annals of Neurology. 22: 507-13. PMID 3435069 DOI: 10.1002/ana.410220410  0.032
1990 Markand ON, Warren C, Mallik GS, King RD, Brown JW, Mahomed Y. Effects of hypothermia on short latency somatosensory evoked potentials in humans. Electroencephalography and Clinical Neurophysiology. 77: 416-24. PMID 1701704  0.032
2022 Davern M, Donlon NE, O' Connell F, Sheppard AD, Hayes C, King R, Temperley H, Butler C, Bhardwaj A, Moore J, Bracken-Clarke D, Donohoe C, Ravi N, Reynolds JV, Maher SG, et al. Cooperation between chemotherapy and immune checkpoint blockade to enhance anti-tumour T cell immunity in oesophageal adenocarcinoma. Translational Oncology. 20: 101406. PMID 35366537 DOI: 10.1016/j.tranon.2022.101406  0.031
2013 Pépin G, King R. Collaborative Care Skills Training workshops: helping carers cope with eating disorders from the UK to Australia. Social Psychiatry and Psychiatric Epidemiology. 48: 805-12. PMID 22961291 DOI: 10.1007/s00127-012-0578-6  0.031
1999 Lytras GN, Geileskey A, King RD, Ledward DA. Effect of muscle type, salt and pH on cooked meat haemoprotein formation in lamb and beef. Meat Science. 52: 189-94. PMID 22062371  0.029
2009 King RD, Lubinski JM, Friedman HM. Herpes simplex virus type 1 infection increases the carbohydrate binding activity and the secretion of cellular galectin-3. Archives of Virology. 154: 609-18. PMID 19291362 DOI: 10.1007/s00705-009-0351-7  0.028
1985 Markand ON, Moorthy SS, Mahomed Y, King RD, Brown JW. Postoperative phrenic nerve palsy in patients with open-heart surgery. The Annals of Thoracic Surgery. 39: 68-73. PMID 3966838  0.02
2017 Rozenblat V, Ryan J, Wertheim E, King R, Olsson CA, Letcher P, Krug I. Relationships Between Self-Reported and Observed Parenting Behaviour, Adolescent Disordered Eating Attitudes and Behaviours, and the 5-HTTLPR Polymorphism: Data From the Australian Temperament Project. European Eating Disorders Review : the Journal of the Eating Disorders Association. PMID 28695573 DOI: 10.1002/erv.2530  0.02
2014 Phillips J, King R, Skouteris H. The influence of psychological factors on post-partum weight retention at 9 months. British Journal of Health Psychology. 19: 751-66. PMID 25295695 DOI: 10.1111/bjhp.12074  0.019
2012 Conlon LE, King RD, Moran NE, Erdman JW. Coconut oil enhances tomato carotenoid tissue accumulation compared to safflower oil in the Mongolian gerbil ( Meriones unguiculatus ). Journal of Agricultural and Food Chemistry. 60: 8386-94. PMID 22866697 DOI: 10.1021/Jf301902K  0.017
2020 Li W, Long L, Yang X, Tong Z, Southwood M, King R, Caruso P, Upton PD, Yang P, Bocobo GA, Nikolic I, Higuera A, Salmon RM, Jiang H, Lodge KM, et al. Circulating BMP9 Protects the Pulmonary Endothelium During Inflammation-induced Lung Injury in Mice. American Journal of Respiratory and Critical Care Medicine. PMID 33320799 DOI: 10.1164/rccm.202005-1761OC  0.017
2016 Krug I, King R, Youssef GJ, Sorabji A, Wertheim E, Le Grange D, Hughes EK, Letcher P, Olsson CA. The effect of low parental warmth and low monitoring on disordered eating in mid-adolescence: Findings from the Australian Temperament Project. Appetite. PMID 27212673 DOI: 10.1016/j.appet.2016.05.015  0.013
1986 Zipes DP, Mahomed Y, King RD, Heger JJ, Miles WM, Brown J, Adams DE, Prystowsky EN. Wolff-Parkinson-White syndrome: cryosurgical treatment. Indiana Medicine : the Journal of the Indiana State Medical Association. 79: 432-7. PMID 3722800  0.011
2024 King RD, Scassa T, Kramer S, Kitano H. Stockholm declaration on AI ethics: why others should sign. Nature. 626: 716. PMID 38378827 DOI: 10.1038/d41586-024-00517-7  0.01
1988 Dusman RE, Miles WM, Mahomed Y, Heger JJ, Klein LS, Prystowsky EN, King RD, Brown JW, Adams DE, Zipes DP. Electrophysiologic directed endocardial resection and cryoablation in the treatment of ventricular tachyarrhythmias. Indiana Medicine : the Journal of the Indiana State Medical Association. 81: 242-50. PMID 3351289  0.01
1986 Potterat JJ, Markewich GS, King RD, Merecicky LR. Child-to-child transmission of gonorrhea: report of asymptomatic genital infection in a boy. Pediatrics. 78: 711-2. PMID 3763281  0.01
1986 Robison RJ, Brown JW, Deschner WP, King RD. Intraluminal shunting of operatively severed aortocoronary saphenous vein grafts. The Annals of Thoracic Surgery. 42: 475-6. PMID 3490234  0.01
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