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Giri Athrey, Ph.D - Publications

Affiliations: 
2002-2009 Biology University of Louisiana - Lafayette 
 2010-2015 Entomology Texas A & M University, College Station, TX, United States 
 2015- Ecology & Evolutionary Biology Texas A & M University, College Station, TX, United States 
Area:
Evolutionary Genetics, Vector Biology, Livestock Genomics
Website:
https://www.giriathrey.com
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Huang X, Athrey GN, Kaufman PE, Fredregill C, Slotman MA. Effective population size of under insecticide-based vector management and following Hurricane Harvey in Harris County, Texas. Frontiers in Genetics. 14: 1297271. PMID 38075683 DOI: 10.3389/fgene.2023.1297271  0.79
2023 Rice ES, Alberdi A, Alfieri J, Athrey G, Balacco JR, Bardou P, Blackmon H, Charles M, Cheng HH, Fedrigo O, Fiddaman SR, Formenti G, Frantz LAF, Gilbert MTP, Hearn CJ, et al. A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants. Bmc Biology. 21: 267. PMID 37993882 DOI: 10.1186/s12915-023-01758-0  0.748
2023 Alfieri JM, Hingoranee R, Athrey GN, Blackmon H. Domestication is Associated with Increased Interspecific Hybrid Compatibility in Landfowl (Order: Galliformes). The Journal of Heredity. PMID 37769441 DOI: 10.1093/jhered/esad059  0.772
2023 Johnson JA, Novak B, Athrey G, Sharo AG, Chase T, Toepfer J. Phylogenomics of the extinct Heath Hen provides support for sex-biased introgression among extant prairie grouse. Molecular Phylogenetics and Evolution. 107927. PMID 37714443 DOI: 10.1016/j.ympev.2023.107927  0.721
2023 Johnson JA, Athrey G, Anderson CM, Bell DA, Dixon A, Kumazawa Y, Maechtle T, Meeks GW, Mindell D, Nakajima K, Novak B, Talbot S, White C, Zhan X. Whole-genome survey reveals extensive variation in genetic diversity and inbreeding levels among peregrine falcon subspecies. Ecology and Evolution. 13: e10347. PMID 37484928 DOI: 10.1002/ece3.10347  0.737
2023 Huang X, Kaufman PE, Athrey GN, Fredregill C, Alvarez C, Shetty V, Slotman MA. Potential key genes involved in metabolic resistance to malathion in the southern house mosquito, Culex quinquefasciatus, and functional validation of CYP325BC1 and CYP9M12 as candidate genes using RNA interference. Bmc Genomics. 24: 160. PMID 36991322 DOI: 10.1186/s12864-023-09241-4  0.765
2023 Smith J, Alfieri JM, Anthony N, Arensburger P, Athrey GN, Balacco J, Balic A, Bardou P, Barela P, Bigot Y, Blackmon H, Borodin PM, Carroll R, Casono MC, Charles M, et al. Fourth Report on Chicken Genes and Chromosomes 2022. Cytogenetic and Genome Research. PMID 36716736 DOI: 10.1159/000529376  0.734
2023 Alfieri JM, Johnson T, Linderholm A, Blackmon H, Athrey GN. Genomic investigation refutes record of most diverged avian hybrid. Ecology and Evolution. 13: e9689. PMID 36620416 DOI: 10.1002/ece3.9689  0.761
2022 Hubert S, Athrey G. Transcriptomic signals of mitochondrial dysfunction and OXPHOS dynamics in fast-growth chicken. Peerj. 10: e13364. PMID 35535239 DOI: 10.7717/peerj.13364  0.656
2022 Alfieri JM, Wang G, Jonika MM, Gill CA, Blackmon H, Athrey GN. A Primer for Single-Cell Sequencing in Non-Model Organisms. Genes. 13. PMID 35205423 DOI: 10.3390/genes13020380  0.734
2021 Hauser SS, Athrey G, Leberg PL. Waste not, want not: Microsatellites remain an economical and informative technology for conservation genetics. Ecology and Evolution. 11: 15800-15814. PMID 34824791 DOI: 10.1002/ece3.8250  0.793
2021 Ibrahim MMA, Nelson JR, Archer GS, Athrey G. Effects of Monochromatic Lighting During Incubation and Vaccination on the Splenic Transcriptome Profiles of Chicken. Frontiers in Genetics. 12: 628041. PMID 34093639 DOI: 10.3389/fgene.2021.628041  0.656
2021 Athrey G, Popkin-Hall ZR, Takken W, Slotman MA. The Expression of Chemosensory Genes in Male Maxillary Palps of Anopheles coluzzii (Diptera: Culicidae) and An. quadriannulatus. Journal of Medical Entomology. PMID 33576414 DOI: 10.1093/jme/tjaa290  0.789
2020 Aguirre ME, Leyva-Jimenez H, Travis R, Lee JT, Athrey G, Alvarado CZ. Evaluation of growth production factors as predictors of the incidence and severity of white striping and woody breast in broiler chickens. Poultry Science. 99: 3723-3732. PMID 32616268 DOI: 10.1016/J.Psj.2020.03.026  0.646
2020 Nelson JR, Sobotik EB, Athrey G, Archer GS. Effects of supplementing yeast fermentate in the feed or drinking water on stress susceptibility, plasma chemistry, cytokine levels, antioxidant status, and stress- and immune-related gene expression of broiler chickens. Poultry Science. 99: 3312-3318. PMID 32616224 DOI: 10.1016/J.Psj.2020.03.037  0.652
2020 Williams T, Athrey G. Cloacal Swabs Are Unreliable Sources for Estimating Lower Gastro-Intestinal Tract Microbiota Membership and Structure in Broiler Chickens. Microorganisms. 8. PMID 32408567 DOI: 10.3390/microorganisms8050718  0.676
2020 Athrey G, Popkin-Hall Z, Cosme LV, Takken W, Slotman MA. Species and sex-specific chemosensory gene expression in Anopheles coluzzii and An. quadriannulatus antennae. Parasites & Vectors. 13: 212. PMID 32321556 DOI: 10.1186/S13071-020-04085-3  0.784
2020 Al-Ajeeli MN, Hubert SM, Leyva-Jimenez H, Hashim MM, Abdaljaleel RA, Alsadwi AM, Athrey G, Bailey CA. Impacts of Dietary Protein and Prebiotic Inclusion on Liver and Spleen Gene Expression in Hy-Line Brown Caged Layers. Animals : An Open Access Journal From Mdpi. 10. PMID 32182781 DOI: 10.3390/Ani10030453  0.665
2019 Hubert SM, Al-Ajeeli M, Bailey CA, Athrey G. The Role of Housing Environment and Dietary Protein Source on the Gut Microbiota of Chicken. Animals : An Open Access Journal From Mdpi. 9. PMID 31817422 DOI: 10.3390/Ani9121085  0.66
2019 Shivanagoudra SR, Perera WH, Perez JL, Athrey G, Sun Y, Wu CS, Jayaprakasha GK, Patil BS. In vitro and in silico elucidation of antidiabetic and anti-inflammatory activities of bioactive compounds from Momordica charantia L. Bioorganic & Medicinal Chemistry. PMID 31196754 DOI: 10.1016/J.Bmc.2019.05.035  0.639
2019 Hieke AC, Hubert SM, Athrey G. Circadian disruption and divergent microbiota acquisition under extended photoperiod regimens in chicken. Peerj. 7: e6592. PMID 30886778 DOI: 10.7717/Peerj.6592  0.668
2019 Shivanagoudra R, Perera WH, Perez JL, Athrey G, Sun Y, Jayaprakasha GK, Patil BS. Cucurbitane-type compounds from Momordica charantia: Isolation, in vitro antidiabetic, anti-inflammatory activities and in silico modeling approaches. Bioorganic Chemistry. 87: 31-42. PMID 30856374 DOI: 10.1016/J.Bioorg.2019.02.040  0.637
2018 Athrey G, Faust N, Hieke AC, Brisbin IL. Effective population sizes and adaptive genetic variation in a captive bird population. Peerj. 6. PMID 30356989 DOI: 10.7717/Peerj.5803  0.725
2018 Levy J, Tamborindeguy C, Athrey G, Scheuring DC, Koym JW, Miller JC. Transcriptome of Russet Norkotah and its clonal selection, TXNS278. Bmc Research Notes. 11: 160. PMID 29490684 DOI: 10.1186/S13104-018-3254-4  0.696
2017 Athrey G, Cosme LV, Popkin-Hall Z, Pathikonda S, Takken W, Slotman MA. Chemosensory gene expression in olfactory organs of the anthropophilic Anopheles coluzzii and zoophilic Anopheles quadriannulatus. Bmc Genomics. 18: 751. PMID 28938869 DOI: 10.1186/S12864-017-4122-7  0.786
2016 Deitz KC, Athrey GA, Jawara M, Overgaard HJ, Matias A, Slotman MA. Genome-Wide Divergence in the West-African Malaria Vector Anopheles melas. G3 (Bethesda, Md.). PMID 27466271 DOI: 10.1534/G3.116.031906  0.703
2015 Athrey G, Lance RF, Leberg PL. Using Genealogical Mapping and Genetic Neighborhood Sizes to Quantify Dispersal Distances in the Neotropical Passerine, the Black-Capped Vireo. Plos One. 10: e0140115. PMID 26461257 DOI: 10.1371/Journal.Pone.0140115  0.8
2015 Hodges TK, Cosme LV, Athrey G, Pathikonda S, Takken W, Slotman MA. Retraction Note: Species-specific chemosensory gene expression in the olfactory organs of the malaria vector Anopheles gambiae. Bmc Genomics. 16: 572. PMID 26238716 DOI: 10.1186/s12864-015-1802-z  0.788
2015 Hodges TK, Cosme LV, Athrey G, Pathikonda S, Takken W, Slotman MA. Retraction Note: Species-specific chemosensory gene expression in the olfactory organs of the malaria vector Anopheles gambiae [BMC Genomics, 15, (2014) 1089] Bmc Genomics. 16. DOI: 10.1186/S12864-015-1802-Z  0.788
2014 Hodges TK, Cosme LV, Athrey G, Pathikonda S, Takken W, Slotman MA. Species-specific chemosensory gene expression in the olfactory organs of the malaria vector Anopheles gambiae. Bmc Genomics. 15: 1089. PMID 25495232 DOI: 10.1186/1471-2164-15-1089  0.787
2013 Hodges TK, Athrey G, Deitz KC, Overgaard HJ, Matias A, Caccone A, Slotman MA. Large fluctuations in the effective population size of the malaria mosquito Anopheles gambiae s.s. during vector control cycle. Evolutionary Applications. 6: 1171-83. PMID 24478799 DOI: 10.1111/Eva.12094  0.785
2013 Walter ST, Carloss MR, Hess TJ, Athrey G, Leberg PL. Brown pelican (Pelecanus occidentalis) Colony initiation attempts: Translocations and decoys Waterbirds. 36: 53-62. DOI: 10.1675/063.036.0109  0.773
2013 Walter ST, Carloss MR, Hess TJ, Athrey G, Leberg PL. Movement patterns and population structure of the brown pelican Condor. 115: 788-799. DOI: 10.1525/Cond.2013.110195  0.772
2012 Athrey G, Hodges TK, Reddy MR, Overgaard HJ, Matias A, Ridl FC, Kleinschmidt I, Caccone A, Slotman MA. The effective population size of malaria mosquitoes: large impact of vector control. Plos Genetics. 8: e1003097. PMID 23271973 DOI: 10.1371/Journal.Pgen.1003097  0.788
2012 Athrey G, Barr KR, Lance RF, Leberg PL. Birds in space and time: genetic changes accompanying anthropogenic habitat fragmentation in the endangered black-capped vireo (Vireo atricapilla). Evolutionary Applications. 5: 540-52. PMID 23028396 DOI: 10.1111/J.1752-4571.2011.00233.X  0.801
2012 Deitz KC, Athrey G, Reddy MR, Overgaard HJ, Matias A, Jawara M, Della Torre A, Petrarca V, Pinto J, Kiszewski AE, Kengne P, Costantini C, Caccone A, Slotman MA. Genetic isolation within the malaria mosquito Anopheles melas. Molecular Ecology. 21: 4498-513. PMID 22882458 DOI: 10.1111/J.1365-294X.2012.05724.X  0.72
2012 Athrey G, Lance RF, Leberg PL. How far is too close? restricted, sex-biased dispersal in black-capped vireos. Molecular Ecology. 21: 4359-70. PMID 22747695 DOI: 10.1111/J.1365-294X.2012.05694.X  0.754
2011 Barr KR, Athrey G, Lindsay DL, Lance RF, Hayden TJ, Tweddale SA, Leberg PL. Missing the forest for the gene trees: Conservation genetics is more than the identification of distinct population segments Auk. 128: 792-794. DOI: 10.1525/Auk.2011.128.4.792  0.793
2011 Athrey G, Lindsay DL, Lance RF, Leberg PL. Crumbling diversity: Comparison of historical archived and contemporary natural populations indicate reduced genetic diversity and increasing genetic differentiation in the golden-cheeked warbler Conservation Genetics. 12: 1345-1355. DOI: 10.1007/S10592-011-0235-8  0.803
2010 Leberg PL, Athrey GNR, Barr KR, Lindsay DL, Lance RF. Implications of landscape alteration for the conservation of genetic diversity of endangered species Molecular Approaches in Natural Resource Conservation and Management. 212-238. DOI: 10.1017/CBO9780511777592.010  0.801
2009 Fike JA, Athrey G, Bowman R, Leberg PL, Rhodes OE. Development of twenty-five polymorphic microsatellite markers for the endangered red-cockaded woodpecker (Picoides borealis) Conservation Genetics. 10: 1021-1023. DOI: 10.1007/S10592-008-9677-Z  0.623
2008 Barr KR, Lindsay DL, Athrey G, Lance RF, Hayden TJ, Tweddale SA, Leberg PL. Population structure in an endangered songbird: maintenance of genetic differentiation despite high vagility and significant population recovery. Molecular Ecology. 17: 3628-39. PMID 18643883 DOI: 10.1111/J.1365-294X.2008.03868.X  0.807
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