| Year |
Citation |
Score |
| 2021 |
Nguyen NTT, Vincens P, Dufayard JF, Roest Crollius H, Louis A. Genomicus in 2022: comparative tools for thousands of genomes and reconstructed ancestors. Nucleic Acids Research. PMID 34792170 DOI: 10.1093/nar/gkab1091 |
0.463 |
|
| 2021 |
Dufayard JF, Bocs S, Guignon V, Larivière D, Louis A, Oubda N, Rouard M, Ruiz M, de Lamotte F. RapGreen, an interactive software and web package to explore and analyze phylogenetic trees. Nar Genomics and Bioinformatics. 3: lqab088. PMID 34568824 DOI: 10.1093/nargab/lqab088 |
0.477 |
|
| 2020 |
Chabannes M, Gabriel M, Aksa A, Galzi S, Dufayard JF, Iskra-Caruana ML, Muller E. Badnaviruses and banana genomes: a long association sheds light on Musa phylogeny and origin. Molecular Plant Pathology. PMID 33231927 DOI: 10.1111/mpp.13019 |
0.439 |
|
| 2020 |
Hennet L, Berger A, Trabanco N, Ricciuti E, Dufayard JF, Bocs S, Bastianelli D, Bonnal L, Roques S, Rossini L, Luquet D, Terrier N, Pot D. Transcriptional Regulation of Sorghum Stem Composition: Key Players Identified Through Co-expression Gene Network and Comparative Genomics Analyses. Frontiers in Plant Science. 11: 224. PMID 32194601 DOI: 10.3389/fpls.2020.00224 |
0.584 |
|
| 2019 |
Fleury C, Gracy J, Gautier MF, Pons JL, Dufayard JF, Labesse G, Ruiz M, de Lamotte F. Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its sequence-structure-function analysis. Peerj. 7: e7504. PMID 31428542 DOI: 10.7717/peerj.7504 |
0.301 |
|
| 2015 |
Dereeper A, Homa F, Andres G, Sempere G, Sarah G, Hueber Y, Dufayard JF, Ruiz M. SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations. Nucleic Acids Research. 43: W295-300. PMID 26040700 DOI: 10.1093/nar/gkv351 |
0.346 |
|
| 2015 |
Cai J, Liu X, Vanneste K, Proost S, Tsai WC, Liu KW, Chen LJ, He Y, Xu Q, Bian C, Zheng Z, Sun F, Liu W, Hsiao YY, Pan ZJ, ... ... Dufayard JF, et al. The genome sequence of the orchid Phalaenopsis equestris. Nature Genetics. 47: 65-72. PMID 25420146 DOI: 10.1038/Ng.3149 |
0.41 |
|
| 2014 |
Fischer I, Dainat J, Ranwez V, Glémin S, Dufayard JF, Chantret N. Impact of recurrent gene duplication on adaptation of plant genomes. Bmc Plant Biology. 14: 151. PMID 24884640 DOI: 10.1186/1471-2229-14-151 |
0.335 |
|
| 2013 |
Droc G, Larivière D, Guignon V, Yahiaoui N, This D, Garsmeur O, Dereeper A, Hamelin C, Argout X, Dufayard JF, Lengelle J, Baurens FC, Cenci A, Pitollat B, D'Hont A, et al. The banana genome hub. Database : the Journal of Biological Databases and Curation. 2013: bat035. PMID 23707967 DOI: 10.1093/Database/Bat035 |
0.478 |
|
| 2009 |
Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M, Perrière G. Databases of homologous gene families for comparative genomics. Bmc Bioinformatics. 10: S3. PMID 19534752 DOI: 10.1186/1471-2105-10-S6-S3 |
0.501 |
|
| 2009 |
Guindon S, Delsuc F, Dufayard JF, Gascuel O. Estimating maximum likelihood phylogenies with PhyML. Methods in Molecular Biology (Clifton, N.J.). 537: 113-37. PMID 19378142 DOI: 10.1007/978-1-59745-251-9_6 |
0.339 |
|
| 2005 |
Dufayard JF, Duret L, Penel S, Gouy M, Rechenmann F, Perrière G. Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases. Bioinformatics (Oxford, England). 21: 2596-603. PMID 15713731 DOI: 10.1093/Bioinformatics/Bti325 |
0.474 |
|
| Show low-probability matches. |