Nicolas Philippe - Publications

Affiliations: 
Univ. Montpellier 2, France 
Area:
Transcriptomic, Genomic, Next Generation Sequencer, RNA-Sequencing, Bioinformatic, Cancer

15/22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Boidot R, Blum MGB, Wissler MP, Gottin C, Ruzicka J, Chevrier S, Delhomme TM, Audoux J, Jeanniard A, Just PA, Harter P, Pignata S, González-Martin A, Marth C, Mäenpää J, ... ... Philippe N, et al. Clinical evaluation of a low-coverage whole-genome test for detecting homologous recombination deficiency in ovarian cancer. European Journal of Cancer (Oxford, England : 1990). 202: 113978. PMID 38471290 DOI: 10.1016/j.ejca.2024.113978  0.301
2022 Yauy K, Lecoquierre F, Baert-Desurmont S, Trost D, Boughalem A, Luscan A, Costa JM, Geromel V, Raymond L, Richard P, Coutant S, Broutin M, Lanos R, Fort Q, Cackowski S, ... ... Philippe N, et al. Genome Alert!: A standardized procedure for genomic variant reinterpretation and automated gene-phenotype reassessment in clinical routine. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 35311657 DOI: 10.1016/j.gim.2022.02.008  0.335
2017 Rufflé F, Audoux J, Boureux A, Beaumeunier S, Gaillard JB, Bou Samra E, Megarbane A, Cassinat B, Chomienne C, Alves R, Riquier S, Gilbert N, Lemaitre JM, Bacq-Daian D, Bougé AL, ... Philippe N, et al. New chimeric RNAs in acute myeloid leukemia. F1000research. 6. PMID 29623188 DOI: 10.12688/F1000Research.11352.1  0.509
2017 Audoux J, Philippe N, Chikhi R, Salson M, Gallopin M, Gabriel M, Le Coz J, Drouineau E, Commes T, Gautheret D. DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition. Genome Biology. 18: 243. PMID 29284518 DOI: 10.1186/S13059-017-1372-2  0.474
2017 Audoux J, Salson M, Grosset CF, Beaumeunier S, Holder JM, Commes T, Philippe N. SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines. Bmc Bioinformatics. 18: 428. PMID 28969586 DOI: 10.1186/S12859-017-1831-5  0.44
2016 Beaumeunier S, Audoux J, Boureux A, Ruffle F, Commes T, Philippe N, Alves R. On the evaluation of the fidelity of supervised classifiers in the prediction of chimeric RNAs. Biodata Mining. 9: 34. PMID 27822312 DOI: 10.1186/S13040-016-0112-6  0.469
2016 Bouckenheimer J, Assou S, Riquier S, Hou C, Philippe N, Sansac C, Lavabre-Bertrand T, Commes T, Lemaître JM, Boureux A, De Vos J. Long non-coding RNAs in human early embryonic development and their potential in ART. Human Reproduction Update. PMID 27655590 DOI: 10.1093/Humupd/Dmw035  0.389
2014 Philippe N, Bou Samra E, Boureux A, Mancheron A, Rufflé F, Bai Q, De Vos J, Rivals E, Commes T. Combining DGE and RNA-sequencing data to identify new polyA+ non-coding transcripts in the human genome. Nucleic Acids Research. 42: 2820-32. PMID 24357408 DOI: 10.1093/Nar/Gkt1300  0.696
2013 Assou S, Al-edani T, Haouzi D, Philippe N, Lecellier CH, Piquemal D, Commes T, Aït-Ahmed O, Dechaud H, Hamamah S. MicroRNAs: new candidates for the regulation of the human cumulus-oocyte complex. Human Reproduction (Oxford, England). 28: 3038-49. PMID 23904466 DOI: 10.1093/Humrep/Det321  0.318
2013 Philippe N, Salson M, Commes T, Rivals E. CRAC: an integrated approach to the analysis of RNA-seq reads. Genome Biology. 14: R30. PMID 23537109 DOI: 10.1186/Gb-2013-14-3-R30  0.656
2012 Philippe N, Salson M, Commes T, Rivals E. A combinatorial and integrated method to analyse RNA-seq reads Embnet.Journal. 17: 11. DOI: 10.14806/Ej.17.B.290  0.697
2012 Philippe N, Ruffle F, Bou-Samra E, Boureux A, Commes T, Rivals E. Digital gene expression data, cross-species conservation and noncoding RNA Embnet.Journal. 17: 32. DOI: 10.14806/Ej.17.B.288  0.68
2011 Philippe N, Salson M, Lecroq T, Léonard M, Commes T, Rivals E. Querying large read collections in main memory: a versatile data structure. Bmc Bioinformatics. 12: 242. PMID 21682852 DOI: 10.1186/1471-2105-12-242  0.659
2010 Philippe N, Ruffle F, Bou-Samra, Boureux, Commes T, Rivals E. R76: Séquençage d’ARN, conservation et ARN non codants Bulletin Du Cancer. 97. DOI: 10.1016/S0007-4551(15)30993-0  0.531
2009 Philippe N, Boureux A, Bréhélin L, Tarhio J, Commes T, Rivals E. Using reads to annotate the genome: influence of length, background distribution, and sequence errors on prediction capacity. Nucleic Acids Research. 37: e104. PMID 19531739 DOI: 10.1093/Nar/Gkp492  0.676
Low-probability matches (unlikely to be authored by this person)
2002 Brohm D, Philippe N, Metzger S, Bhargava A, Müller O, Lieb F, Waldmann H. Solid-phase synthesis of dysidiolide-derived protein phosphatase inhibitors. Journal of the American Chemical Society. 124: 13171-8. PMID 12405845 DOI: 10.1021/Ja027609F  0.174
2022 Pujol P, Yauy K, Coffy A, Duforet-Frebourg N, Gabteni S, Daurès JP, Penault Llorca F, Thomas F, Hughes K, Turnbull C, Galibert V, Rideau C, Corsini C, Collet L, You B, ... ... Philippe N, et al. Predominance of Mutation and Estrogen Receptor Positivity in Unselected Breast Cancer with or Mutation. Cancers. 14. PMID 35805038 DOI: 10.3390/cancers14133266  0.066
2022 Davarzani H, Philippe N, Cochennec M, Colombano S, Dierick M, Ataie-Ashtiani B, Klein PY, Marcoux M. Numerical simulations of high viscosity DNAPL recovery in highly permeable porous media under isothermal and non-isothermal conditions. Journal of Contaminant Hydrology. 251: 104073. PMID 36137463 DOI: 10.1016/j.jconhyd.2022.104073  0.064
2018 Philippe N, Rivron L, De Bruin B, Schofield J, Roy S. Two new convenient syntheses of 14C-squalene from turbinaric acid. Journal of Labelled Compounds & Radiopharmaceuticals. PMID 30066967 DOI: 10.1002/jlcr.3672  0.053
2017 Cobo-Calvo Á, Ruiz A, D'Indy H, Poulat AL, Carneiro M, Philippe N, Durand-Dubief F, Deiva K, Vukusic S, Desportes V, Marignier R. MOG antibody-related disorders: common features and uncommon presentations. Journal of Neurology. PMID 28770374 DOI: 10.1007/S00415-017-8583-Z  0.049
2021 Philippe N, Davarzani H, Colombano S, Dierick M, Klein PY, Marcoux M. Experimental study of thermally enhanced recovery of high-viscosity DNAPL in saturated porous media under non-isothermal conditions. Journal of Contaminant Hydrology. 243: 103861. PMID 34391967 DOI: 10.1016/j.jconhyd.2021.103861  0.046
2018 Duran GE, Derdau V, Weitz D, Philippe N, Blankenstein J, Atzrodt J, Sémiond D, Gianolio DA, Macé S, Sikic BI. Cabazitaxel is more active than first-generation taxanes in ABCB1(+) cell lines due to its reduced affinity for P-glycoprotein. Cancer Chemotherapy and Pharmacology. PMID 29675746 DOI: 10.1007/S00280-018-3572-1  0.027
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