| Year |
Citation |
Score |
| 2024 |
Johnson BS, Allen DK, Bates PD. Triacylglycerol stability limits futile cycles and inhibition of carbon capture in oil-accumulating leaves. Plant Physiology. PMID 38431525 DOI: 10.1093/plphys/kiae121 |
0.58 |
|
| 2024 |
Kambhampati S, Hubbard AH, Koley S, Gomez JD, Marsolais F, Evans BS, Young JD, Allen DK. SIMPEL: using stable isotopes to elucidate dynamics of context specific metabolism. Communications Biology. 7: 172. PMID 38347116 DOI: 10.1038/s42003-024-05844-z |
0.396 |
|
| 2023 |
Xu Y, Kambhampati S, Morley SA, Cook R, Froehlich J, Allen DK, Benning C. Arabidopsis ACYL CARRIER PROTEIN4 and RHOMBOID LIKE10 act independently in chloroplast phosphatidate synthesis. Plant Physiology. PMID 37658850 DOI: 10.1093/plphys/kiad483 |
0.394 |
|
| 2023 |
Morley SA, Ma F, Alazem M, Frankfater C, Yi H, Burch-Smith T, Clemente TE, Veena V, Nguyen H, Allen DK. Expression of malic enzyme reveals subcellular carbon partitioning for storage reserve production in soybeans. The New Phytologist. PMID 36829298 DOI: 10.1111/nph.18835 |
0.496 |
|
| 2022 |
Koley S, Chu KL, Mukherjee T, Morley SA, Klebanovych A, Czymmek KJ, Allen DK. Metabolic synergy in Camelina reproductive tissues for seed development. Science Advances. 8: eabo7683. PMID 36306367 DOI: 10.1126/sciadv.abo7683 |
0.372 |
|
| 2022 |
Wang J, Kambhampati S, Allen DK, Chen LQ. Comparative Metabolic Analysis Reveals a Metabolic Switch in Mature, Hydrated, and Germinated Pollen in . Frontiers in Plant Science. 13: 836665. PMID 35665175 DOI: 10.3389/fpls.2022.836665 |
0.471 |
|
| 2022 |
Koley S, Chu KL, Gill SS, Allen DK. An efficient LC-MS method for isomer separation and detection of sugars, phosphorylated sugars, and organic acids. Journal of Experimental Botany. 73: 2938-2952. PMID 35560196 DOI: 10.1093/jxb/erac062 |
0.373 |
|
| 2022 |
Koley S, Chu KL, Gill SS, Allen DK. An efficient LC-MS method for isomer separation and detection of sugars, phosphorylated sugars, and organic acids. Journal of Experimental Botany. 73: 2938-2952. PMID 35560196 DOI: 10.1093/jxb/erac062 |
0.373 |
|
| 2022 |
Aznar-Moreno JA, Mukherjee T, Morley SA, Duressa D, Kambhampati S, Chu KL, Koley S, Allen DK, Durrett TP. Suppression of Improves Soybean Seed Composition by Increasing Oil and Reducing Undigestible Oligosaccharides. Frontiers in Plant Science. 13: 863254. PMID 35401590 DOI: 10.3389/fpls.2022.863254 |
0.365 |
|
| 2021 |
Chu KL, Koley S, Jenkins LM, Bailey SR, Kambhampati S, Foley K, Arp JJ, Morley SA, Czymmek KJ, Bates PD, Allen DK. Metabolic flux analysis of the non-transitory starch tradeoff for lipid production in mature tobacco leaves. Metabolic Engineering. PMID 34920088 DOI: 10.1016/j.ymben.2021.12.003 |
0.642 |
|
| 2021 |
Jenkins LM, Nam JW, Evans BS, Allen DK. Quantification of Acyl-Acyl Carrier Proteins for Fatty Acid Synthesis Using LC-MS/MS. Methods in Molecular Biology (Clifton, N.J.). 2295: 219-247. PMID 34047980 DOI: 10.1007/978-1-0716-1362-7_13 |
0.34 |
|
| 2021 |
Romsdahl TB, Kambhampati S, Koley S, Yadav UP, Alonso AP, Allen DK, Chapman KD. Analyzing Mass Spectrometry Imaging Data of C-Labeled Phospholipids in and (Pennycress) Embryos. Metabolites. 11. PMID 33806402 DOI: 10.3390/metabo11030148 |
0.426 |
|
| 2021 |
Kambhampati S, Aznar-Moreno JA, Bailey SR, Arp JJ, Chu KL, Bilyeu KD, Durrett TP, Allen DK. Temporal changes in metabolism late in seed development affect biomass composition. Plant Physiology. PMID 33693938 DOI: 10.1093/plphys/kiab116 |
0.437 |
|
| 2020 |
Nam JW, Jenkins LM, Li J, Evans B, Jaworski JG, Allen DK. A General Method for Quantification and Discovery of Acyl Groups Attached to Acyl Carrier Proteins in Fatty Acid Metabolism using LC-MS/MS. The Plant Cell. PMID 32060179 DOI: 10.1105/Tpc.19.00954 |
0.419 |
|
| 2020 |
Czajka JJ, Kambhampati S, Tang YJ, Wang Y, Allen DK. Application of Stable Isotope Tracing to Elucidate Metabolic Dynamics During Yarrowia lipolytica α-Ionone Fermentation. Iscience. 23: 100854. PMID 32058965 DOI: 10.1016/j.isci.2020.100854 |
0.369 |
|
| 2019 |
Kambhampati S, Aznar-Moreno JA, Hostetler C, Caso T, Bailey SR, Hubbard AH, Durrett TP, Allen DK. On the Inverse Correlation of Protein and Oil: Examining the Effects of Altered Central Carbon Metabolism on Seed Composition Using Soybean Fast Neutron Mutants. Metabolites. 10. PMID 31905618 DOI: 10.3390/metabo10010018 |
0.37 |
|
| 2019 |
Allen DK, Young JD. Tracing metabolic flux through time and space with isotope labeling experiments. Current Opinion in Biotechnology. 64: 92-100. PMID 31864070 DOI: 10.1016/J.Copbio.2019.11.003 |
0.342 |
|
| 2019 |
Zhou XR, Bhandari S, Johnson BS, Kotapati HK, Allen DK, Vanhercke T, Bates PD. Reorganization of acyl flux through the lipid metabolic network in oil-accumulating tobacco leaves. Plant Physiology. PMID 31792147 DOI: 10.1104/Pp.19.00667 |
0.628 |
|
| 2018 |
Bilyeu K, Škrabišová M, Allen D, Rajcan I, Palmquist DE, Gillen A, Mian R, Jo H. The Interaction of the Soybean Seed High Oleic Acid Oil Trait With Other Fatty Acid Modifications Journal of the American Oil Chemists' Society. 95: 39-49. DOI: 10.1002/Aocs.12025 |
0.436 |
|
| 2017 |
Abernathy MH, Yu J, Ma F, Liberton M, Ungerer J, Hollinshead WD, Gopalakrishnan S, He L, Maranas CD, Pakrasi HB, Allen DK, Tang YJ. Deciphering cyanobacterial phenotypes for fast photoautotrophic growth via isotopically nonstationary metabolic flux analysis. Biotechnology For Biofuels. 10: 273. PMID 29177008 DOI: 10.1186/S13068-017-0958-Y |
0.312 |
|
| 2017 |
Ma F, Jazmin LJ, Young JD, Allen DK. Isotopically Nonstationary Metabolic Flux Analysis (INST-MFA) of Photosynthesis and Photorespiration in Plants. Methods in Molecular Biology (Clifton, N.J.). 1653: 167-194. PMID 28822133 DOI: 10.1007/978-1-4939-7225-8_12 |
0.478 |
|
| 2017 |
Hendry JI, Prasannan C, Ma F, Möllers KB, Jaiswal D, Digmurti M, Allen DK, Frigaard NU, Dasgupta S, Wangikar PP. Rerouting of carbon flux in a glycogen mutant of cyanobacteria assessed via isotopically non-stationary (13) C metabolic flux analysis. Biotechnology and Bioengineering. PMID 28600876 DOI: 10.1002/Bit.26350 |
0.396 |
|
| 2017 |
Yang W, Wang G, Li J, Bates PD, Wang X, Allen DK. Phospholipase Dζ enhances diacylglycerol flux into triacylglycerol. Plant Physiology. PMID 28325849 DOI: 10.1104/Pp.17.00026 |
0.617 |
|
| 2016 |
Hodges M, Dellero Y, Keech O, Betti M, Raghavendra AS, Sage R, Zhu XG, Allen DK, Weber AP. Perspectives for a better understanding of the metabolic integration of photorespiration within a complex plant primary metabolism network. Journal of Experimental Botany. PMID 27053720 DOI: 10.1093/Jxb/Erw145 |
0.423 |
|
| 2016 |
Allen DK. Assessing compartmentalized flux in lipid metabolism with isotopes. Biochimica Et Biophysica Acta. PMID 27003250 DOI: 10.1016/j.bbalip.2016.03.017 |
0.474 |
|
| 2015 |
Allen DK. Quantifying plant phenotypes with isotopic labeling & metabolic flux analysis. Current Opinion in Biotechnology. 37: 45-52. PMID 26613198 DOI: 10.1016/j.copbio.2015.10.002 |
0.432 |
|
| 2015 |
Allen DK, Bates PD, Tjellström H. Tracking the metabolic pulse of plant lipid production with isotopic labeling and flux analyses: Past, present and future. Progress in Lipid Research. 58: 97-120. PMID 25773881 DOI: 10.1016/J.Plipres.2015.02.002 |
0.604 |
|
| 2014 |
Ma F, Jazmin LJ, Young JD, Allen DK. Isotopically nonstationary 13C flux analysis of changes in Arabidopsis thaliana leaf metabolism due to high light acclimation. Proceedings of the National Academy of Sciences of the United States of America. 111: 16967-72. PMID 25368168 DOI: 10.1073/Pnas.1319485111 |
0.464 |
|
| 2014 |
Guo L, Ma F, Wei F, Fanella B, Allen DK, Wang X. Cytosolic phosphorylating glyceraldehyde-3-phosphate dehydrogenases affect Arabidopsis cellular metabolism and promote seed oil accumulation. The Plant Cell. 26: 3023-35. PMID 24989043 DOI: 10.1105/Tpc.114.126946 |
0.424 |
|
| 2014 |
Allen DK, Evans BS, Libourel IG. Analysis of isotopic labeling in peptide fragments by tandem mass spectrometry. Plos One. 9: e91537. PMID 24626471 DOI: 10.1371/Journal.Pone.0091537 |
0.363 |
|
| 2014 |
Mandy DE, Goldford JE, Yang H, Allen DK, Libourel IG. Metabolic flux analysis using ¹³C peptide label measurements. The Plant Journal : For Cell and Molecular Biology. 77: 476-86. PMID 24279886 DOI: 10.1111/tpj.12390 |
0.31 |
|
| 2014 |
Jazmin LJ, O'Grady JP, Ma F, Allen DK, Morgan JA, Young JD. Isotopically nonstationary MFA (INST-MFA) of autotrophic metabolism. Methods in Molecular Biology (Clifton, N.J.). 1090: 181-210. PMID 24222417 DOI: 10.1007/978-1-62703-688-7_12 |
0.382 |
|
| 2013 |
Allen DK, Young JD. Carbon and nitrogen provisions alter the metabolic flux in developing soybean embryos. Plant Physiology. 161: 1458-75. PMID 23314943 DOI: 10.1104/Pp.112.203299 |
0.453 |
|
| 2012 |
Allen DK, Laclair RW, Ohlrogge JB, Shachar-Hill Y. Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments Plant, Cell and Environment. 35: 1232-1244. PMID 22292468 DOI: 10.1111/J.1365-3040.2012.02485.X |
0.587 |
|
| 2012 |
Tjellström H, Yang Z, Allen DK, Ohlrogge JB. Rapid kinetic labeling of Arabidopsis cell suspension cultures: implications for models of lipid export from plastids. Plant Physiology. 158: 601-11. PMID 22128138 DOI: 10.1104/Pp.111.186122 |
0.593 |
|
| 2011 |
Chen X, Alonso AP, Allen DK, Reed JL, Shachar-Hill Y. Synergy between (13)C-metabolic flux analysis and flux balance analysis for understanding metabolic adaptation to anaerobiosis in E. coli. Metabolic Engineering. 13: 38-48. PMID 21129495 DOI: 10.1016/J.Ymben.2010.11.004 |
0.345 |
|
| 2009 |
Ohlrogge J, Allen D, Berguson B, Penna DD, Shachar-Hill Y, Stymne S. Driving on biomass Science. 324: 1019-1020. PMID 19460990 DOI: 10.1126/Science.1171740 |
0.463 |
|
| 2009 |
Allen DK, Libourel IGL, Shachar-Hill Y. Metabolic flux analysis in plants: Coping with complexity Plant, Cell and Environment. 32: 1241-1257. PMID 19422611 DOI: 10.1111/J.1365-3040.2009.01992.X |
0.396 |
|
| 2009 |
Allen DK, Ohlrogge JB, Shachar-Hill Y. The role of light in soybean seed filling metabolism Plant Journal. 58: 220-234. PMID 19077167 DOI: 10.1111/J.1365-313X.2008.03771.X |
0.603 |
|
| 2007 |
Allen DK, Shachar-Hill Y, Ohlrogge JB. Compartment-specific labeling information in 13C metabolic flux analysis of plants Phytochemistry. 68: 2197-2210. PMID 17532016 DOI: 10.1016/J.Phytochem.2007.04.010 |
0.625 |
|
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