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Victoria T. Lim, PhD - Publications

Affiliations: 
Chemistry University of California, Irvine, Irvine, CA 
Area:
computer-aided drug design
Website:
https://vtlim.github.io/
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11/18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Qiu Y, Smith DGA, Boothroyd S, Jang H, Hahn DF, Wagner J, Bannan CC, Gokey T, Lim VT, Stern CD, Rizzi A, Tjanaka B, Tresadern G, Lucas X, Shirts MR, et al. Development and Benchmarking of Open Force Field v1.0.0-the Parsley Small-Molecule Force Field. Journal of Chemical Theory and Computation. PMID 34551262 DOI: 10.1021/acs.jctc.1c00571  0.695
2021 Zhao C, Hong L, Riahi S, Lim VT, Tobias DJ, Tombola F. A novel Hv1 inhibitor reveals a new mechanism of inhibition of a voltage-sensing domain. The Journal of General Physiology. 153. PMID 34228045 DOI: 10.1085/jgp.202012833  0.498
2021 Zhao C, Hong L, Galpin JD, Riahi S, Lim VT, Webster PD, Tobias DJ, Ahern CA, Tombola F. HIFs: New arginine mimic inhibitors of the Hv1 channel with improved VSD-ligand interactions. The Journal of General Physiology. 153. PMID 34228044 DOI: 10.1085/jgp.202012832  0.498
2021 Ehrman JN, Lim VT, Bannan CC, Thi N, Kyu DY, Mobley DL. Improving small molecule force fields by identifying and characterizing small molecules with inconsistent parameters. Journal of Computer-Aided Molecular Design. PMID 33506360 DOI: 10.1007/s10822-020-00367-1  0.698
2020 Lim VT, Hahn DF, Tresadern G, Bayly CI, Mobley DL. Benchmark assessment of molecular geometries and energies from small molecule force fields. F1000research. 9. PMID 33604023 DOI: 10.12688/f1000research.27141.1  0.736
2020 Lim VT, Freites JA, Tombola F, Tobias DJ. Thermodynamics and Mechanism of the Membrane Permeation of Hv1 Channel Blockers. The Journal of Membrane Biology. PMID 33196887 DOI: 10.1007/s00232-020-00149-8  0.532
2020 Lim VT, Geragotelis AD, Lim NM, Freites JA, Tombola F, Mobley DL, Tobias DJ. Insights on small molecule binding to the Hv1 proton channel from free energy calculations with molecular dynamics simulations. Scientific Reports. 10: 13587. PMID 32788614 DOI: 10.1038/S41598-020-70369-4  0.649
2019 Lim VT, Bayly CI, Fusti-Molnar L, Mobley DL. Assessing the conformational equilibrium of carboxylic acid via QM and MD studies on acetic acid. Journal of Chemical Information and Modeling. PMID 30742770 DOI: 10.1021/Acs.Jcim.8B00835  0.539
2019 Lim VT, Lim NM, Geragotelis AD, Freites JA, Tombola F, Mobley DL, Tobias DJ. Computational Insights on Small Molecule Binding to the Hv1 Proton Channel Biophysical Journal. 116: 432a. DOI: 10.1016/J.Bpj.2018.11.2326  0.63
2018 Mobley DL, Bannan CC, Rizzi A, Bayly CI, Chodera JD, Lim VT, Lim NM, Beauchamp KA, Slochower DR, Shirts MR, Eastman PK. Escaping atom types in force fields using direct chemical perception. Journal of Chemical Theory and Computation. PMID 30351006 DOI: 10.1021/Acs.Jctc.8B00640  0.685
2016 Lim VT, Tsukanov SV, Stephens AB, Johnston JN. Enantioselective Synthesis of α-Bromonitroalkanes for Umpolung Amide Synthesis: Preparation of tert-Butyl ((1R)-1-(4-(benzyloxy)phenyl)-2-bromo-2-nitroethyl)carbamate. Organic Syntheses; An Annual Publication of Satisfactory Methods For the Preparation of Organic Chemicals. 93: 88-99. PMID 28579652 DOI: 10.15227/Orgsyn.093.0088  0.405
Low-probability matches (unlikely to be authored by this person)
2017 Crespo A, Rodriguez-Granillo A, Lim VT. Quantum-Mechanics Methodologies in Drug Discovery: Applications of Docking and Scoring in Lead Optimization. Current Topics in Medicinal Chemistry. PMID 28685695 DOI: 10.2174/1568026617666170707120609  0.256
2020 Rovsnik U, Lim V, Blau C, Howard RJ, Lindahl E. Cryo-EM Structure Determination and Model Fitting of the Proton-Gated Ligand-Gated Ion Channel glic at Multiple pH States Biophysical Journal. 118: 581a-582a. DOI: 10.1016/J.Bpj.2019.11.3155  0.144
2021 Axelsson LS, Rovsnik U, Blau C, Lycksell M, Lim V, Howard RJ, Lindahl ER. Balancing Stereochemistry and Goodness-of-Fit for Automated Simulation-Based Refinement into Cryo-EM Maps Biophysical Journal. 120: 173a. DOI: 10.1016/J.BPJ.2020.11.1220  0.093
2016 Wang MX, Hsieh S, Maranda EL, Lim V, Jimenez J. The Emperor's Itch. Jama Dermatology. 152: 451. PMID 27074361 DOI: 10.1001/jamadermatol.2015.4241  0.012
2016 Lim V, Simmons BJ, Maranda EL, Afifi L, Kallis PJ, Jimenez J. Sugaring-Modern Revival of an Ancient Egyptian Technique for Hair Removal. Jama Dermatology. 152: 660. PMID 27276351 DOI: 10.1001/jamadermatol.2015.4864  0.01
2016 Hsiao C, Hsieh S, Maranda EL, Lim V, Zullo J, Jimenez J. Syphilis, a Disfiguring Disease. Jama Dermatology. 152: 404. PMID 27074359 DOI: 10.1001/jamadermatol.2015.4242  0.01
2016 Wang MX, Maranda EL, Cortizo J, Lim V, Jimenez J. Henna-A Temporary Body of Art. Jama Dermatology. 152: 290. PMID 26964052 DOI: 10.1001/jamadermatol.2015.4237  0.01
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