Nikki Shariat - Publications

Affiliations: 
University of California, San Francisco, San Francisco, CA 

1/48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Khan IS, Park CY, Mavropoulos A, Shariat N, Pollack JL, Barczak AJ, Erle DJ, McManus MT, Anderson MS, Jeker LT. Identification of MiR-205 As a MicroRNA That Is Highly Expressed in Medullary Thymic Epithelial Cells. Plos One. 10: e0135440. PMID 26270036 DOI: 10.1371/Journal.Pone.0135440  0.694
Low-probability matches (unlikely to be authored by this person)
2013 Farmer DT, Shariat N, Park CY, Liu HJ, Mavropoulos A, McManus MT. Partially penetrant postnatal lethality of an epithelial specific MicroRNA in a mouse knockout. Plos One. 8: e76634. PMID 24116130 DOI: 10.1371/Journal.Pone.0076634  0.218
2005 Liu L, Cañizares MC, Monger W, Perrin Y, Tsakiris E, Porta C, Shariat N, Nicholson L, Lomonossoff GP. Cowpea mosaic virus-based systems for the production of antigens and antibodies in plants. Vaccine. 23: 1788-92. PMID 15734042 DOI: 10.1016/J.VACCINE.2004.11.006  0.203
2008 Shariat N, Ryther RC, Phillips JA, Robinson IC, Patton JG. Rescue of pituitary function in a mouse model of isolated growth hormone deficiency type II by RNA interference. Endocrinology. 149: 580-6. PMID 18006625 DOI: 10.1210/en.2007-1360  0.196
2008 Solis AS, Shariat N, Patton JG. Splicing fidelity, enhancers, and disease. Frontiers in Bioscience : a Journal and Virtual Library. 13: 1926-42. PMID 17981680 DOI: 10.2741/2812  0.181
2024 Raccoursier M, Siceloff AT, Shariat NW. and PCR Screening for a Live Attenuated Typhimurium Vaccine Strain. Avian Diseases. 68: 18-24. PMID 38687103 DOI: 10.1637/aviandiseases-D-23-00051  0.12
2008 Shariat N, Holladay CD, Cleary RK, Phillips JA, Patton JG. Isolated growth hormone deficiency type II caused by a point mutation that alters both splice site strength and splicing enhancer function. Clinical Genetics. 74: 539-45. PMID 18554279 DOI: 10.1111/j.1399-0004.2008.01042.x  0.104
2020 Richards AK, Hopkins BA, Shariat NW. Conserved CRISPR arrays in Salmonella enterica serovar Infantis can serve as qPCR targets to detect Infantis in mixed serovar populations. Letters in Applied Microbiology. PMID 32333808 DOI: 10.1111/lam.13296  0.103
2004 Oswald-Richter K, Grill SM, Shariat N, Leelawong M, Sundrud MS, Haas DW, Unutmaz D. HIV infection of naturally occurring and genetically reprogrammed human regulatory T-cells. Plos Biology. 2: E198. PMID 15252446 DOI: 10.1371/Journal.Pbio.0020198  0.095
2022 Siceloff AT, Waltman D, Shariat NW. Regional Differences in United States Broiler Production from 2016 to 2020 and the Contribution of Multiserovar Populations to Surveillance. Applied and Environmental Microbiology. 88: e0020422. PMID 35384708 DOI: 10.1128/aem.00204-22  0.092
2023 Obe T, Siceloff AT, Crowe MG, Scott HM, Shariat NW. Combined Quantification and Deep Serotyping for Salmonella Risk Profiling in Broiler Flocks. Applied and Environmental Microbiology. e0203522. PMID 36920215 DOI: 10.1128/aem.02035-22  0.087
2023 Hegde S, Rauch HE, Hughes GL, Shariat N. Identification and characterization of two CRISPR/Cas systems associated with the mosquito microbiome. Access Microbiology. 5. PMID 37691844 DOI: 10.1099/acmi.0.000599.v4  0.084
2018 Thompson CP, Doak AN, Amirani N, Schroeder EA, Wright J, Kariyawasam S, Lamendella R, Shariat NW. High-resolution identification of multiple serovars in a single sample using CRISPR-SeroSeq. Applied and Environmental Microbiology. PMID 30170999 DOI: 10.1128/Aem.01859-18  0.083
2021 Obe T, Richards AK, Shariat NW. Differences in biofilm formation of Salmonella serovars on two surfaces under two temperature conditions. Journal of Applied Microbiology. PMID 34821433 DOI: 10.1111/jam.15381  0.082
2021 Shariat NW, Timme RE, Walters AT. Phylogeny of subspecies by whole-genome sequencing reveals high incidence of polyphyly and low phase 1 H antigen variability. Microbial Genomics. PMID 33539276 DOI: 10.1099/mgen.0.000522  0.081
2023 Gorski L, Shariat NW, Richards AK, Siceloff AT, Aviles Noriega A, Harhay DM. Growth assessment of Salmonella enterica multi-serovar populations in poultry rinsates with commonly used enrichment and plating media. Food Microbiology. 119: 104431. PMID 38225041 DOI: 10.1016/j.fm.2023.104431  0.081
2021 Rasamsetti S, Berrang M, Cox NA, Shariat NW. Selective pre-enrichment method to lessen time needed to recover Salmonella from commercial poultry processing samples. Food Microbiology. 99: 103818. PMID 34119103 DOI: 10.1016/j.fm.2021.103818  0.08
2022 Fu Y, M'ikanatha NM, Lorch JM, Blehert DS, Berlowski-Zier B, Whitehouse CA, Li S, Deng X, Smith JC, Shariat NW, Nawrocki EM, Dudley EG. serovar Typhimurium from Wild Birds in the United States Represent Distinct Lineages Defined by Bird Type. Applied and Environmental Microbiology. AEM0197921. PMID 35108089 DOI: 10.1128/AEM.01979-21  0.078
2022 Rasamsetti S, Berrang ME, Cox NA, Shariat NW. Assessing Salmonella prevalence and complexity through processing using different culture methods. Poultry Science. 101: 101949. PMID 35688029 DOI: 10.1016/j.psj.2022.101949  0.075
2020 Tracy LM, Hicks JA, Grogan KB, Nicholds JA, Morningstar-Shaw BR, Shariat NW. Molecular Detection of Salmonella enterica subsp. arizonae by Quantitative PCR. Avian Diseases. 64: 305-309. PMID 33205175 DOI: 10.1637/aviandiseases-D-19-00197  0.075
2016 Very KJ, Kirchner MK, Shariat N, Cottrell W, Sandt CH, Dudley EG, Kariyawasam S, Jayarao BM. Prevalence and Spatial Distribution of Salmonella Infections in the Pennsylvania Raccoon (Procyon lotor) Zoonoses and Public Health. 63: 223-233. DOI: 10.1111/zph.12222  0.072
2014 Shariat N, Dudley EG. CRISPRs: molecular signatures used for pathogen subtyping. Applied and Environmental Microbiology. 80: 430-9. PMID 24162568 DOI: 10.1128/Aem.02790-13  0.072
2023 Richards AK, Kue S, Norris CG, Shariat NW. Genomic and phenotypic characterization of serovar Kentucky. Microbial Genomics. 9. PMID 37750759 DOI: 10.1099/mgen.0.001089  0.069
2023 Richards AK, Siceloff AT, Simmons M, Tillman GE, Shariat NW. Poultry processing interventions reduce Salmonella serovar complexity on post-chill young chicken carcasses as determined by deep serotyping. Journal of Food Protection. 100208. PMID 38142825 DOI: 10.1016/j.jfp.2023.100208  0.069
2019 Cox NA, Berrang ME, House SL, Medina D, Cook KL, Shariat NW. Population Analyses Reveal Preenrichment Method and Selective Enrichment Media Affect Serovars Detected on Broiler Carcasses. Journal of Food Protection. 1688-1696. PMID 31536420 DOI: 10.4315/0362-028X.JFP-19-166  0.069
2022 McMillan EA, Berrang ME, Read QD, Rasamsetti S, Richards AK, Shariat NW, Frye JG. Buffered Peptone Water Formulation Does Not Influence Growth of pESI-positive Salmonella enterica Serovar Infantis. Journal of Food Protection. 86: 100033. PMID 36916571 DOI: 10.1016/j.jfp.2022.100033  0.068
2013 Shariat N, DiMarzio MJ, Yin S, Dettinger L, Sandt CH, Lute JR, Barrangou R, Dudley EG. The combination of CRISPR-MVLST and PFGE provides increased discriminatory power for differentiating human clinical isolates of Salmonella enterica subsp. enterica serovar Enteritidis. Food Microbiology. 34: 164-73. PMID 23498194 DOI: 10.1016/J.Fm.2012.11.012  0.067
2022 Rasamsetti S, Shariat NW. Biomapping salmonella serovar complexity in broiler carcasses and parts during processing. Food Microbiology. 110: 104149. PMID 36462810 DOI: 10.1016/j.fm.2022.104149  0.067
2023 Meinersmann RJ, Berrang ME, Shariat NW, Richards A, Miller WG. Despite Shared Geography, Campylobacter Isolated from Surface Water Are Genetically Distinct from Campylobacter Isolated from Chickens. Microbiology Spectrum. e0414722. PMID 36861983 DOI: 10.1128/spectrum.04147-22  0.066
2018 Rauch HE, Vosik D, Kariyawasam S, M'ikanatha N, Shariat NW. Prevalence of Group I Salmonella Kentucky in domestic food animals from Pennsylvania and overlap with human clinical CRISPR sequence types. Zoonoses and Public Health. PMID 30014599 DOI: 10.1111/zph.12506  0.064
2015 Shariat N, Timme RE, Pettengill JB, Barrangou R, Dudley EG. Characterization and evolution of Salmonella CRISPR-Cas systems. Microbiology (Reading, England). 161: 374-386. PMID 28206902 DOI: 10.1099/Mic.0.000005  0.062
2015 Shariat N, Timme RE, Pettengill JB, Barrangou R, Dudley EG. Characterization and evolution of Salmonella CRISPR-Cas systems. Microbiology (Reading, England). 161: 374-86. PMID 25479838 DOI: 10.1099/mic.0.000005  0.062
2013 Dimarzio M, Shariat N, Kariyawasam S, Barrangou R, Dudley EG. Antibiotic resistance in Salmonella Typhimurium associates with CRISPR sequence type. Antimicrobial Agents and Chemotherapy. PMID 23796925 DOI: 10.1128/Aac.00913-13  0.061
2013 Shariat N, Kirchner MK, Sandt CH, Trees E, Barrangou R, Dudley EG. Subtyping of Salmonella enterica serovar Newport outbreak isolates by CRISPR-MVLST and determination of the relationship between CRISPR-MVLST and PFGE results. Journal of Clinical Microbiology. 51: 2328-36. PMID 23678062 DOI: 10.1128/Jcm.00608-13  0.061
2022 Fu Y, Smith JC, Shariat NW, M'ikanatha NM, Dudley EG. Evidence for common ancestry and microevolution of passerine-adapted serovar Typhimurium in the UK and USA. Microbial Genomics. 8. PMID 35195512 DOI: 10.1099/mgen.0.000775  0.057
2020 Shariat NW, Feye KM, Richards AK, Booher B, Flores Z, Rubinelli PM, Olson EG, Ricke SC. Incidence ofSalmonella serovars isolated from commercial animal feed mills in the United States and serovar identification using CRISPR analysis. Journal of Applied Microbiology. PMID 33190398 DOI: 10.1111/jam.14933  0.057
2021 Deaven AM, Ferreira CM, Reed EA, Chen See JR, Lee NA, Almaraz E, Rios PC, Marogi JG, Lamendella R, Zheng J, Bell RL, Shariat NW. genomics and population analyses reveal high inter- and intra- serovar diversity in freshwater. Applied and Environmental Microbiology. PMID 33397693 DOI: 10.1128/AEM.02594-20  0.055
2023 Smith JC, Varriano S, Roach K, Snipes Z, Dawson JL, Shealy J, Dunn LL, Snyder WE, Shariat NW. Prevalence and molecular characterization of isolated from wild birds in fresh produce environments. Frontiers in Microbiology. 14: 1272916. PMID 38029194 DOI: 10.3389/fmicb.2023.1272916  0.054
2015 Ivanov YV, Shariat N, Register KB, Linz B, Rivera I, Hu K, Dudley EG, Harvill ET. A newly discovered Bordetella species carries a transcriptionally active CRISPR-Cas with a small Cas9 endonuclease. Bmc Genomics. 16: 863. PMID 26502932 DOI: 10.1186/S12864-015-2028-9  0.05
2013 Oswald-Richter K, Grill SM, Shariat N, Leelawong M, Sundrud MS, Haas DW, Unutmaz D. Cytokine Secretion by Treg T-cells Plos Biology. DOI: 10.1371/Journal.Pbio.0020198.G002  0.048
2016 Denagamage TN, Patterson P, Wallner-Pendleton E, Trampel D, Shariat N, Dudley EG, Jayarao BM, Kariyawasam S. Longitudinal Monitoring of Successive Commercial Layer Flocks for Salmonella enterica Serovar Enteritidis. Foodborne Pathogens and Disease. PMID 27792449 DOI: 10.1089/Fpd.2016.2146  0.047
2021 Shariat N, Dudley E. CRISPR Typing of Salmonella Isolates. Methods of Molecular Biology. 2182: 39-44. PMID 32894485 DOI: 10.1007/978-1-0716-0791-6_5  0.047
2018 Vosik D, Tewari D, Dettinger L, M'ikanatha NM, Shariat NW. CRISPR Typing and Antibiotic Resistance Correlates with Polyphyletic Distribution in Human Isolates of Salmonella Kentucky. Foodborne Pathogens and Disease. 15: 101-108. PMID 29394097 DOI: 10.1089/fpd.2017.2298  0.044
2015 Deng X, Shariat N, Driebe EM, Roe CC, Tolar B, Trees E, Keim P, Zhang W, Dudley EG, Fields PI, Engelthaler DM. Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis. Journal of Clinical Microbiology. 53: 212-8. PMID 25378576 DOI: 10.1128/Jcm.02332-14  0.044
2013 Shariat N, Sandt CH, DiMarzio MJ, Barrangou R, Dudley EG. CRISPR-MVLST subtyping of Salmonella enterica subsp. enterica serovars Typhimurium and Heidelberg and application in identifying outbreak isolates. Bmc Microbiology. 13: 254. PMID 24219629 DOI: 10.1186/1471-2180-13-254  0.043
2021 Siceloff AT, Ohta N, Norman KN, Loneragan GH, Norby B, Scott HM, Shariat NW. Antimicrobial resistance hidden within multi-serovar populations. Antimicrobial Agents and Chemotherapy. PMID 33782004 DOI: 10.1128/AAC.00048-21  0.042
2013 Shariat N, Dudley EG. Where are we heading with Salmonella molecular subtyping? Future Microbiology. 8: 1231-3. PMID 24059912 DOI: 10.2217/Fmb.13.107  0.036
2022 Shariat NW, Larsen BR, Schaeffer C, Richardson KE. Animal feed contains diverse populations of Salmonella. Journal of Applied Microbiology. PMID 35279932 DOI: 10.1111/jam.15525  0.028
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