Year |
Citation |
Score |
2024 |
Wagner T, Priyanka P, Micheletti R, Friedman MJ, Nair SJ, Gamliel A, Taylor H, Song X, Cho M, Oh S, Li W, Han J, Ohgi KA, Abrass M, D'Antonio-Chronowska A, et al. Recruitment of CTCF to the SIRT1 promoter after Oxidative Stress mediates Cardioprotective Transcription. Biorxiv : the Preprint Server For Biology. PMID 38798402 DOI: 10.1101/2024.05.17.594600 |
0.77 |
|
2023 |
Zheng C, Wei Y, Zhang P, Lin K, He D, Teng H, Manyam G, Zhang Z, Liu W, Lee HRL, Tang X, He W, Islam N, Jain A, Chiu Y, ... ... Li W, et al. CRISPR-Cas9-based functional interrogation of unconventional translatome reveals human cancer dependency on cryptic non-canonical open reading frames. Nature Structural & Molecular Biology. PMID 37932451 DOI: 10.1038/s41594-023-01117-1 |
0.302 |
|
2023 |
Pulecio J, Tayyebi Z, Liu D, Wong W, Luo R, Damodaran JR, Kaplan S, Cho H, Yan J, Murphy D, Rickert RW, Shukla A, Zhong A, González F, Yang D, ... Li W, et al. Discovery of Competent Chromatin Regions in Human Embryonic Stem Cells. Biorxiv : the Preprint Server For Biology. PMID 37398096 DOI: 10.1101/2023.06.14.544990 |
0.353 |
|
2022 |
Zhu X, Qi C, Wang R, Lee JH, Shao J, Bei L, Xiong F, Nguyen PT, Li G, Krakowiak J, Koh SP, Simon LM, Han L, Moore TI, Li W. Acute depletion of human core nucleoporin reveals direct roles in transcription control but dispensability for 3D genome organization. Cell Reports. 41: 111576. PMID 36323253 DOI: 10.1016/j.celrep.2022.111576 |
0.4 |
|
2021 |
Lee JH, Wang R, Xiong F, Krakowiak J, Liao Z, Nguyen PT, Moroz-Omori EV, Shao J, Zhu X, Bolt MJ, Wu H, Singh PK, Bi M, Shi CJ, Jamal N, ... ... Li W, et al. Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation. Molecular Cell. PMID 34375583 DOI: 10.1016/j.molcel.2021.07.024 |
0.345 |
|
2021 |
Oh S, Shao J, Mitra J, Xiong F, D'Antonio M, Wang R, Garcia-Bassets I, Ma Q, Zhu X, Lee JH, Nair SJ, Yang F, Ohgi K, Frazer KA, Zhang ZD, ... Li W, et al. Enhancer release and retargeting activates disease-susceptibility genes. Nature. PMID 34040254 DOI: 10.1038/s41586-021-03577-1 |
0.744 |
|
2020 |
González-Rodríguez P, Cheray M, Füllgrabe J, Salli M, Engskog-Vlachos P, Keane L, Cunha V, Lupa A, Li W, Ma Q, Dreij K, Rosenfeld MG, Joseph B. The DNA methyltransferase DNMT3A contributes to autophagy long-term memory. Autophagy. PMID 32876528 DOI: 10.1080/15548627.2020.1816664 |
0.443 |
|
2020 |
Yang M, Lee JH, Zhang Z, De La Rosa R, Bi M, Tan Y, Liao Y, Hong J, Du B, Wu Y, Scheirer J, Hong T, Li W, Fei T, Hsieh CL, ... ... Li W, et al. Enhancer RNAs Mediate Estrogen-Induced Decommissioning of Selective Enhancers by Recruiting ERα and Its Cofactor. Cell Reports. 31: 107803. PMID 32579929 DOI: 10.1016/j.celrep.2020.107803 |
0.621 |
|
2020 |
Liao Z, Lee JH, Krakowiak J, Wang R, Li W. Enforced Activation of Enhancer RNAs In Situ through the dCas9 Synergistic Activation Mediator System. Journal of Visualized Experiments : Jove. PMID 32568241 DOI: 10.3791/61460 |
0.427 |
|
2020 |
Luo Z, Wang X, Jiang H, Wang R, Chen J, Chen Y, Xu Q, Cao J, Gong X, Wu J, Yang Y, Li W, Han C, Cheng CY, Rosenfeld MG, et al. Reorganized 3D Genome Structures Support Transcriptional Regulation in Mouse Spermatogenesis. Iscience. 23: 101034. PMID 32315832 DOI: 10.1016/J.Isci.2020.101034 |
0.607 |
|
2020 |
Lee JH, Xiong F, Li W. Enhancer RNAs in Cancer: Regulation, Mechanisms and Therapeutic Potential. Rna Biology. PMID 31916476 DOI: 10.1080/15476286.2020.1712895 |
0.364 |
|
2019 |
Nguyen TM, Kabotyanski EB, Reineke LC, Shao J, Xiong F, Lee JH, Dubrulle J, Johnson H, Stossi F, Tsoi PS, Choi KJ, Ellis AG, Zhao N, Cao J, Adewunmi O, ... ... Li W, et al. The SINEB1 element in the long non-coding RNA Malat1 is necessary for TDP-43 proteostasis. Nucleic Acids Research. PMID 31863590 DOI: 10.1093/Nar/Gkz1176 |
0.321 |
|
2019 |
Zhang Z, Lee JH, Ruan H, Ye Y, Krakowiak J, Hu Q, Xiang Y, Gong J, Zhou B, Wang L, Lin C, Diao L, Mills GB, Li W, Han L. Transcriptional landscape and clinical utility of enhancer RNAs for eRNA-targeted therapy in cancer. Nature Communications. 10: 4562. PMID 31594934 DOI: 10.1038/s41467-019-12543-5 |
0.301 |
|
2018 |
Bai S, Fu K, Yin H, Cui Y, Yue Q, Li W, Cheng L, Tan H, Liu X, Guo Y, Zhang Y, Xie J, He W, Wang Y, Feng H, et al. Sox30 initiates transcription of haploid genes during late meiosis and spermiogenesis in mouse testes. Development (Cambridge, England). PMID 29866902 DOI: 10.1242/dev.164855 |
0.338 |
|
2018 |
Cardamone MD, Tanasa B, Cederquist CT, Huang J, Mahdaviani K, Li W, Rosenfeld MG, Liesa M, Perissi V. Mitochondrial Retrograde Signaling in Mammals Is Mediated by the Transcriptional Cofactor GPS2 via Direct Mitochondria-to-Nucleus Translocation. Molecular Cell. 69: 757-772.e7. PMID 29499132 DOI: 10.1016/J.Molcel.2018.01.037 |
0.718 |
|
2017 |
Gao X, Lee HY, Li W, Platt RJ, Barrasa MI, Ma Q, Elmes RR, Rosenfeld MG, Lodish HF. Thyroid hormone receptor beta and NCOA4 regulate terminal erythrocyte differentiation. Proceedings of the National Academy of Sciences of the United States of America. PMID 28864529 DOI: 10.1073/Pnas.1711058114 |
0.506 |
|
2017 |
Yang F, Ma Q, Liu Z, Li W, Tan Y, Jin C, Ma W, Hu Y, Shen J, Ohgi KA, Telese F, Liu W, Rosenfeld MG. Glucocorticoid Receptor:MegaTrans Switching Mediates the Repression of an ERα-Regulated Transcriptional Program. Molecular Cell. 66: 321-331.e6. PMID 28475868 DOI: 10.1016/j.molcel.2017.03.019 |
0.558 |
|
2017 |
Füllgrabe J, Lynch-Day MA, Heldring N, Li W, Struijk RB, Ma Q, Hermanson O, Rosenfeld MG, Klionsky DJ, Joseph B. Corrigendum: The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy. Nature. PMID 28297710 DOI: 10.1038/Nature22027 |
0.379 |
|
2016 |
Li W, Notani D, Rosenfeld MG. Enhancers as non-coding RNA transcription units: recent insights and future perspectives. Nature Reviews. Genetics. PMID 26948815 DOI: 10.1038/nrg.2016.4 |
0.572 |
|
2015 |
Wang J, Telese F, Tan Y, Li W, Jin C, He X, Basnet H, Ma Q, Merkurjev D, Zhu X, Liu Z, Zhang J, Ohgi K, Taylor H, White RR, et al. LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control. Nature Neuroscience. PMID 26214369 DOI: 10.1038/Nn.4069 |
0.649 |
|
2015 |
Li W, Hu Y, Oh S, Ma Q, Merkurjev D, Song X, Zhou X, Liu Z, Tanasa B, He X, Chen AY, Ohgi K, Zhang J, Liu W, Rosenfeld MG. Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation. Molecular Cell. 59: 188-202. PMID 26166704 DOI: 10.1016/J.Molcel.2015.06.002 |
0.776 |
|
2015 |
Telese F, Ma Q, Perez PM, Notani D, Oh S, Li W, Comoletti D, Ohgi KA, Taylor H, Rosenfeld MG. LRP8-Reelin-Regulated Neuronal Enhancer Signature Underlying Learning and Memory Formation. Neuron. 86: 696-710. PMID 25892301 DOI: 10.1016/j.neuron.2015.03.033 |
0.73 |
|
2015 |
Puc J, Kozbial P, Li W, Tan Y, Liu Z, Suter T, Ohgi KA, Zhang J, Aggarwal AK, Rosenfeld MG. Ligand-dependent enhancer activation regulated by topoisomerase-I activity. Cell. 160: 367-80. PMID 25619691 DOI: 10.1016/J.Cell.2015.08.044 |
0.548 |
|
2015 |
Zhang F, Tanasa B, Merkurjev D, Lin C, Song X, Li W, Tan Y, Liu Z, Zhang J, Ohgi KA, Krones A, Skowronska-Krawczyk D, Rosenfeld MG. Enhancer-bound LDB1 regulates a corticotrope promoter-pausing repression program. Proceedings of the National Academy of Sciences of the United States of America. 112: 1380-5. PMID 25605944 DOI: 10.1073/Pnas.1424228112 |
0.693 |
|
2014 |
Liu Z, Merkurjev D, Yang F, Li W, Oh S, Friedman MJ, Song X, Zhang F, Ma Q, Ohgi KA, Krones A, Rosenfeld MG. Enhancer activation requires trans-recruitment of a mega transcription factor complex. Cell. 159: 358-73. PMID 25303530 DOI: 10.1016/J.Cell.2014.08.027 |
0.779 |
|
2014 |
Skowronska-Krawczyk D, Ma Q, Schwartz M, Scully K, Li W, Liu Z, Taylor H, Tollkuhn J, Ohgi KA, Notani D, Kohwi Y, Kohwi-Shigematsu T, Rosenfeld MG. Required enhancer-matrin-3 network interactions for a homeodomain transcription program. Nature. 514: 257-61. PMID 25119036 DOI: 10.1038/Nature13573 |
0.772 |
|
2014 |
Jin C, Yang L, Xie M, Lin C, Merkurjev D, Yang JC, Tanasa B, Oh S, Zhang J, Ohgi KA, Zhou H, Li W, Evans CP, Ding S, Rosenfeld MG. Chem-seq permits identification of genomic targets of drugs against androgen receptor regulation selected by functional phenotypic screens. Proceedings of the National Academy of Sciences of the United States of America. 111: 9235-40. PMID 24928520 DOI: 10.1073/Pnas.1404303111 |
0.709 |
|
2014 |
Lam MT, Li W, Rosenfeld MG, Glass CK. Enhancer RNAs and regulated transcriptional programs. Trends in Biochemical Sciences. 39: 170-82. PMID 24674738 DOI: 10.1016/j.tibs.2014.02.007 |
0.566 |
|
2013 |
Liu W, Ma Q, Wong K, Li W, Ohgi K, Zhang J, Aggarwal AK, Rosenfeld MG. Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release. Cell. 155: 1581-95. PMID 24360279 DOI: 10.1016/J.Cell.2013.10.056 |
0.583 |
|
2013 |
Yang L, Lin C, Jin C, Yang JC, Tanasa B, Li W, Merkurjev D, Ohgi KA, Meng D, Zhang J, Evans CP, Rosenfeld MG. lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs. Nature. 500: 598-602. PMID 23945587 DOI: 10.1038/nature12451 |
0.519 |
|
2013 |
Füllgrabe J, Lynch-Day MA, Heldring N, Li W, Struijk RB, Ma Q, Hermanson O, Rosenfeld MG, Klionsky DJ, Joseph B. The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy. Nature. 500: 468-71. PMID 23863932 DOI: 10.1038/Nature12313 |
0.49 |
|
2013 |
Li W, Notani D, Ma Q, Tanasa B, Nunez E, Chen AY, Merkurjev D, Zhang J, Ohgi K, Song X, Oh S, Kim HS, Glass CK, Rosenfeld MG. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature. 498: 516-20. PMID 23728302 DOI: 10.1038/Nature12210 |
0.776 |
|
2012 |
Hu Q, Tanasa B, Trabucchi M, Li W, Zhang J, Ohgi KA, Rose DW, Glass CK, Rosenfeld MG. DICER- and AGO3-dependent generation of retinoic acid-induced DR2 Alu RNAs regulates human stem cell proliferation. Nature Structural & Molecular Biology. 19: 1168-75. PMID 23064648 DOI: 10.1038/nsmb.2400 |
0.521 |
|
2012 |
Yang L, Lin C, Nunez E, Li W, Destici E, Rosenfeld MG. Abstract IA3: Functional implications of relocation of regulated transcription units in prostate cancer Cancer Research. 72: IA3-IA3. DOI: 10.1158/1538-7445.Prca2012-Ia3 |
0.72 |
|
2011 |
Wang D, Garcia-Bassets I, Benner C, Li W, Su X, Zhou Y, Qiu J, Liu W, Kaikkonen MU, Ohgi KA, Glass CK, Rosenfeld MG, Fu XD. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature. 474: 390-4. PMID 21572438 DOI: 10.1038/Nature10006 |
0.625 |
|
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