Year |
Citation |
Score |
2023 |
Mahlich Y, Zhu C, Chung H, Velaga PK, De Paolis Kaluza MC, Radivojac P, Friedberg I, Bromberg Y. Learning from the unknown: exploring the range of bacterial functionality. Nucleic Acids Research. 51: 10162-10175. PMID 37739408 DOI: 10.1093/nar/gkad757 |
0.755 |
|
2022 |
Bromberg Y, Aptekmann AA, Mahlich Y, Cook L, Senn S, Miller M, Nanda V, Ferreiro DU, Falkowski PG. Quantifying structural relationships of metal-binding sites suggests origins of biological electron transfer. Science Advances. 8: eabj3984. PMID 35030025 DOI: 10.1126/sciadv.abj3984 |
0.524 |
|
2021 |
Mahlich Y, Miller M, Zeng Z, Bromberg Y. Low Diversity of Human Variation Despite Mostly Mild Functional Impact of De Novo Variants. Frontiers in Molecular Biosciences. 8: 635382. PMID 33816556 DOI: 10.3389/fmolb.2021.635382 |
0.756 |
|
2020 |
Zhu C, Miller M, Zeng Z, Wang Y, Mahlich Y, Aptekmann A, Bromberg Y. Computational Approaches for Unraveling the Effects of Variation in the Human Genome and Microbiome Annual Review of Biomedical Data Science. 3: 411-432. DOI: 10.1146/annurev-biodatasci-030320-041014 |
0.638 |
|
2019 |
Zhu C, Miller M, Lusskin N, Mahlich Y, Wang Y, Zeng Z, Bromberg Y. Fingerprinting cities: differentiating subway microbiome functionality. Biology Direct. 14: 19. PMID 31666099 DOI: 10.1186/S13062-019-0252-Y |
0.638 |
|
2018 |
Mahlich Y, Steinegger M, Rost B, Bromberg Y. HFSP: high speed homology-driven function annotation of proteins. Bioinformatics (Oxford, England). 34: i304-i312. PMID 29950013 DOI: 10.1093/bioinformatics/bty262 |
0.709 |
|
2017 |
Zhu C, Mahlich Y, Miller M, Bromberg Y. fusionDB: assessing microbial diversity and environmental preferences via functional similarity networks. Nucleic Acids Research. PMID 29194481 DOI: 10.1093/Nar/Gkx1212 |
0.77 |
|
2017 |
Mahlich Y, Reeb J, Hecht M, Schelling M, De Beer TAP, Bromberg Y, Rost B. Common sequence variants affect molecular function more than rare variants? Scientific Reports. 7: 1608. PMID 28487536 DOI: 10.1038/S41598-017-01054-2 |
0.737 |
|
2016 |
Reeb J, Hecht M, Mahlich Y, Bromberg Y, Rost B. Predicted Molecular Effects of Sequence Variants Link to System Level of Disease. Plos Computational Biology. 12: e1005047. PMID 27536940 DOI: 10.1371/Journal.Pcbi.1005047 |
0.722 |
|
2013 |
Hamp T, Kassner R, Seemayer S, Vicedo E, Schaefer C, Achten D, Auer F, Boehm A, Braun T, Hecht M, Heron M, Hönigschmid P, Hopf TA, Kaufmann S, Kiening M, ... ... Mahlich Y, et al. Homology-based inference sets the bar high for protein function prediction. Bmc Bioinformatics. 14: S7. PMID 23514582 DOI: 10.1186/1471-2105-14-S3-S7 |
0.522 |
|
2013 |
Radivojac P, Clark WT, Oron TR, Schnoes AM, Wittkop T, Sokolov A, Graim K, Funk C, Verspoor K, Ben-Hur A, Pandey G, Yunes JM, Talwalkar AS, Repo S, Souza ML, ... ... Mahlich Y, et al. A large-scale evaluation of computational protein function prediction. Nature Methods. 10: 221-7. PMID 23353650 DOI: 10.1038/Nmeth.2340 |
0.564 |
|
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