Sandhya P. Koushika - Publications

Department of Biolgical Sciences Tata Institute of Fundamental Research, Mumbai, India 

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Nadiminti SSP, Dixit SB, Ratnakaran N, Deb A, Hegde S, Boyanapalli SPP, Swords S, Grant BD, Koushika SP. LRK-1/LRRK2 and AP-3 regulate trafficking of synaptic vesicle precursors through active zone protein SYD-2/Liprin-α. Plos Genetics. 20: e1011253. PMID 38722918 DOI: 10.1371/journal.pgen.1011253  0.419
2024 Sabharwal V, Boyanapalli SPP, Shee A, Nonet ML, Nandi A, Chaudhuri D, Koushika SP. F-box protein FBXB-65 regulates anterograde transport of a Kinesin-3 motor UNC-104 through a PTM near its cargo-binding PH domain. Journal of Cell Science. PMID 38477340 DOI: 10.1242/jcs.261553  0.736
2024 Vasudevan A, Ratnakaran N, Murthy K, Kumari S, Hall DH, Koushika SP. Preferential transport of synaptic vesicles across neuronal branches is regulated by the levels of the anterograde motor UNC-104/KIF1A in vivo. Genetics. PMID 38467475 DOI: 10.1093/genetics/iyae021  0.503
2023 Vasudevan A, Maiya R, Venkatesh K, Kumar V, Sood P, Murthy K, Koushika SP, Menon GI. Anterograde transport of synaptic vesicles is modulated by vesicular reversals and stationary cargo clusters. Journal of Cell Science. PMID 37194499 DOI: 10.1242/jcs.261223  0.405
2023 Nadiminti SSP, Dixit SB, Ratnakaran N, Hegde S, Swords S, Grant BD, Koushika SP. Active zone protein SYD-2/Liprin-α acts downstream of LRK-1/LRRK2 to regulate polarized trafficking of synaptic vesicle precursors through clathrin adaptor protein complexes. Biorxiv : the Preprint Server For Biology. PMID 36865111 DOI: 10.1101/2023.02.26.530068  0.333
2022 Mathew A, Koushika SP. Transport-dependent maturation of organelles in neurons. Current Opinion in Cell Biology. 78: 102121. PMID 36030563 DOI: 10.1016/  0.509
2022 Teoh JS, Vasudevan A, Wang W, Dhananjay S, Chandhok G, Pocock R, Koushika SP, Neumann B. Synaptic branch stability is mediated by non-enzymatic functions of MEC-17/αTAT1 and ATAT-2. Scientific Reports. 12: 14003. PMID 35977998 DOI: 10.1038/s41598-022-18333-2  0.443
2022 Nadiminti SSP, Koushika SP. Imaging Intracellular Trafficking in Neurons of C. elegans. Methods in Molecular Biology (Clifton, N.J.). 2431: 499-530. PMID 35412295 DOI: 10.1007/978-1-0716-1990-2_27  0.503
2021 Kulkarni SS, Sabharwal V, Sheoran S, Basu A, Matsumoto K, Hisamoto N, Ghosh-Roy A, Koushika SP. UNC-16 alters DLK-1 localization and negatively regulates actin and microtubule dynamics in Caenorhabditis elegans regenerating neurons. Genetics. 219. PMID 34740241 DOI: 10.1093/genetics/iyab139  0.73
2021 Mondal S, Dubey J, Awasthi A, Sure GR, Vasudevan A, Koushika SP. Tracking mitochondrial density and positioning along a growing neuronal process in individual neuron using a long-term growth and imaging microfluidic device. Eneuro. PMID 34035072 DOI: 10.1523/ENEURO.0360-20.2021  0.465
2020 Vasudevan A, Koushika SP. Molecular mechanisms governing axonal transport: a perspective. Journal of Neurogenetics. 34: 282-297. PMID 33030066 DOI: 10.1080/01677063.2020.1823385  0.535
2019 Venkatesh K, Mathew A, Koushika SP. Role of actin in organelle trafficking in neurons. Cytoskeleton (Hoboken, N.J.). 77: 97-109. PMID 31725955 DOI: 10.1002/cm.21580  0.449
2019 Sabharwal V, Koushika SP. Crowd Control: Effects of Physical Crowding on Cargo Movement in Healthy and Diseased Neurons. Frontiers in Cellular Neuroscience. 13: 470. PMID 31708745 DOI: 10.3389/fncel.2019.00470  0.745
2018 Sure GR, Chatterjee A, Mishra N, Sabharwal V, Devireddy S, Awasthi A, Mohan S, Koushika SP. UNC-16/JIP3 and UNC-76/FEZ1 limit the density of mitochondria in C. elegans neurons by maintaining the balance of anterograde and retrograde mitochondrial transport. Scientific Reports. 8: 8938. PMID 29895958 DOI: 10.1038/s41598-018-27211-9  0.735
2018 Thapliyal S, Vasudevan A, Dong Y, Bai J, Koushika SP, Babu K. The C-terminal of CASY-1/Calsyntenin regulates GABAergic synaptic transmission at the Caenorhabditis elegans neuromuscular junction. Plos Genetics. 14: e1007263. PMID 29529030 DOI: 10.1371/journal.pgen.1007263  0.307
2017 Sood P, Murthy K, Kumar TV, Nonet ML, Menon GI, Koushika SP. Cargo crowding at actin-rich regions along axons causes local traffic jams. Traffic (Copenhagen, Denmark). PMID 29178177 DOI: 10.1111/tra.12544  0.725
2017 Choudhary B, Kamak M, Ratnakaran N, Kumar J, Awasthi A, Li C, Nguyen K, Matsumoto K, Hisamoto N, Koushika SP. UNC-16/JIP3 regulates early events in synaptic vesicle protein trafficking via LRK-1/LRRK2 and AP complexes. Plos Genetics. 13: e1007100. PMID 29145394 DOI: 10.1371/journal.pgen.1007100  0.453
2017 Basu A, Dey S, Puri D, Das Saha N, Sabharwal V, Thyagarajan P, Srivastava P, Koushika SP, Ghosh-Roy A. let-7 miRNA controls CED-7 homotypic adhesion and EFF-1-mediated axonal self-fusion to restore touch sensation following injury. Proceedings of the National Academy of Sciences of the United States of America. PMID 29109254 DOI: 10.1073/pnas.1704372114  0.743
2016 Zhang D, Dubey J, Koushika SP, Rongo C. RAB-6.1 and RAB-6.2 Promote Retrograde Transport in C. elegans. Plos One. 11: e0149314. PMID 26891225 DOI: 10.1371/Journal.Pone.0149314  0.422
2015 Dubey J, Ratnakaran N, Koushika SP. Neurodegeneration and microtubule dynamics: death by a thousand cuts. Frontiers in Cellular Neuroscience. 9: 343. PMID 26441521 DOI: 10.3389/fncel.2015.00343  0.368
2014 Nair A, Ramanarayanan S, Ahlawat S, Koushika S, Joshi N, Sivaprakasam M. Axonal transport velocity estimation from kymographs based on curvilinear feature extraction and spline fitting. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 4240-3. PMID 25570928 DOI: 10.1109/EMBC.2014.6944560  0.363
2014 Zheng Q, Ahlawat S, Schaefer A, Mahoney T, Koushika SP, Nonet ML. The vesicle protein SAM-4 regulates the processivity of synaptic vesicle transport. Plos Genetics. 10: e1004644. PMID 25329901 DOI: 10.1371/Journal.Pgen.1004644  0.779
2012 Monteiro MI, Ahlawat S, Kowalski JR, Malkin E, Koushika SP, Juo P. The kinesin-3 family motor KLP-4 regulates anterograde trafficking of GLR-1 glutamate receptors in the ventral nerve cord of Caenorhabditis elegans. Molecular Biology of the Cell. 23: 3647-62. PMID 22855524 DOI: 10.1091/Mbc.E12-04-0334  0.326
2012 Maniar TA, Kaplan M, Wang GJ, Shen K, Wei L, Shaw JE, Koushika SP, Bargmann CI. UNC-33 (CRMP) and ankyrin organize microtubules and localize kinesin to polarize axon-dendrite sorting. Nature Neuroscience. 15: 48-56. PMID 22101643 DOI: 10.1038/nn.2970  0.453
2011 Arimoto M, Koushika SP, Choudhary BC, Li C, Matsumoto K, Hisamoto N. The Caenorhabditis elegans JIP3 protein UNC-16 functions as an adaptor to link kinesin-1 with cytoplasmic dynein. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 2216-24. PMID 21307258 DOI: 10.1523/JNEUROSCI.2653-10.2011  0.475
2011 Mondal S, Ahlawat S, Rau K, Venkataraman V, Koushika SP. Imaging in vivo neuronal transport in genetic model organisms using microfluidic devices. Traffic (Copenhagen, Denmark). 12: 372-85. PMID 21199219 DOI: 10.1111/j.1600-0854.2010.01157.x  0.319
2011 Murthy K, Bhat JM, Koushika SP. In vivo imaging of retrogradely transported synaptic vesicle proteins in Caenorhabditis elegans neurons. Traffic (Copenhagen, Denmark). 12: 89-101. PMID 21029289 DOI: 10.1111/J.1600-0854.2010.01127.X  0.355
2010 Kumar J, Choudhary BC, Metpally R, Zheng Q, Nonet ML, Ramanathan S, Klopfenstein DR, Koushika SP. The Caenorhabditis elegans Kinesin-3 motor UNC-104/KIF1A is degraded upon loss of specific binding to cargo. Plos Genetics. 6: e1001200. PMID 21079789 DOI: 10.1371/Journal.Pgen.1001200  0.669
2008 Koushika SP. "JIP"ing along the axon: the complex roles of JIPs in axonal transport. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 30: 10-4. PMID 18081006 DOI: 10.1002/bies.20695  0.42
2004 Koushika SP, Schaefer AM, Vincent R, Willis JH, Bowerman B, Nonet ML. Mutations in Caenorhabditis elegans cytoplasmic dynein components reveal specificity of neuronal retrograde cargo. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 24: 3907-16. PMID 15102906 DOI: 10.1523/Jneurosci.5039-03.2004  0.785
2002 Simmer F, Tijsterman M, Parrish S, Koushika SP, Nonet ML, Fire A, Ahringer J, Plasterk RH. Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Current Biology : Cb. 12: 1317-9. PMID 12176360 DOI: 10.1016/S0960-9822(02)01041-2  0.573
2002 Toba G, Qui J, Koushika SP, White K. Ectopic expression of Drosophila ELAV and human HuD in Drosophila wing disc cells reveals functional distinctions and similarities. Journal of Cell Science. 115: 2413-21. PMID 12006625  0.485
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