| Year |
Citation |
Score |
| 2023 |
Beagrie RA, Thieme CJ, Annunziatella C, Baugher C, Zhang Y, Schueler M, Kukalev A, Kempfer R, Chiariello AM, Bianco S, Li Y, Davis T, Scialdone A, Welch LR, Nicodemi M, et al. Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C. Nature Methods. PMID 37336949 DOI: 10.1038/s41592-023-01903-1 |
0.556 |
|
| 2023 |
Vermunt MW, Luan J, Zhang Z, Thrasher AJ, Huang A, Saari MS, Khandros E, Beagrie RA, Zhang S, Vemulamada P, Brilleman M, Lee K, Yano JA, Giardine BM, Keller CA, et al. Gene silencing dynamics are modulated by transiently active regulatory elements. Molecular Cell. 83: 715-730.e6. PMID 36868189 DOI: 10.1016/j.molcel.2023.02.006 |
0.385 |
|
| 2021 |
King AJ, Songdej D, Downes DJ, Beagrie RA, Liu S, Buckley M, Hua P, Suciu MC, Marieke Oudelaar A, Hanssen LLP, Jeziorska D, Roberts N, Carpenter SJ, Francis H, Telenius J, et al. Reactivation of a developmentally silenced embryonic globin gene. Nature Communications. 12: 4439. PMID 34290235 DOI: 10.1038/s41467-021-24402-3 |
0.317 |
|
| 2021 |
Larke MSC, Schwessinger R, Nojima T, Telenius J, Beagrie RA, Downes DJ, Oudelaar AM, Truch J, Graham B, Bender MA, Proudfoot NJ, Higgs DR, Hughes JR. Enhancers predominantly regulate gene expression during differentiation via transcription initiation. Molecular Cell. PMID 33539786 DOI: 10.1016/j.molcel.2021.01.002 |
0.375 |
|
| 2021 |
Downes DJ, Beagrie RA, Gosden ME, Telenius J, Carpenter SJ, Nussbaum L, De Ornellas S, Sergeant M, Eijsbouts CQ, Schwessinger R, Kerry J, Roberts N, Shivalingam A, El-Sagheer A, Oudelaar AM, et al. High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale. Nature Communications. 12: 531. PMID 33483495 DOI: 10.1038/s41467-020-20809-6 |
0.366 |
|
| 2020 |
Oudelaar AM, Beagrie RA, Gosden M, de Ornellas S, Georgiades E, Kerry J, Hidalgo D, Carrelha J, Shivalingam A, El-Sagheer AH, Telenius JM, Brown T, Buckle VJ, Socolovsky M, Higgs DR, et al. Dynamics of the 4D genome during in vivo lineage specification and differentiation. Nature Communications. 11: 2722. PMID 32483172 DOI: 10.1038/S41467-020-16598-7 |
0.411 |
|
| 2017 |
Beagrie RA, Pombo A. Cell cycle: Continuous chromatin changes. Nature. 547: 34-35. PMID 28682328 DOI: 10.1038/547034a |
0.464 |
|
| 2017 |
Beagrie RA, Scialdone A, Schueler M, Kraemer DC, Chotalia M, Xie SQ, Barbieri M, de Santiago I, Lavitas LM, Branco MR, Fraser J, Dostie J, Game L, Dillon N, Edwards PA, et al. Complex multi-enhancer contacts captured by genome architecture mapping. Nature. PMID 28273065 DOI: 10.1038/Nature21411 |
0.581 |
|
| 2016 |
Beagrie RA, Pombo A. Examining Topological Domain Influence on Enhancer Function. Developmental Cell. 39: 523-524. PMID 27923117 DOI: 10.1016/j.devcel.2016.11.011 |
0.521 |
|
| 2016 |
Beagrie RA, Pombo A. Gene activation by metazoan enhancers: Diverse mechanisms stimulate distinct steps of transcription. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 38: 881-93. PMID 27452946 DOI: 10.1002/bies.201600032 |
0.518 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2023 |
Jung MM, Shen S, Botten GA, Olender T, Katsumura KR, Johnson KD, Soukup AA, Liu P, Zhang Q, Jensvold ZD, Lewis PW, Beagrie RA, Low JK, Yang L, Mackay JP, et al. Pathogenic human variant that dislocates GATA2 zinc fingers disrupts hematopoietic gene expression and signaling networks. The Journal of Clinical Investigation. PMID 36809258 DOI: 10.1172/JCI162685 |
0.275 |
|
| 2020 |
Scott C, Downes DJ, Brown JM, Beagrie R, Olijnik AA, Gosden M, Schwessinger R, Fisher CA, Rose A, Ferguson DJP, Johnson E, Hill QA, Okoli S, Renella R, Ryan K, et al. Recapitulation of erythropoiesis in congenital dyserythropoietic anaemia type I (CDA-I) identifies defects in differentiation and nucleolar abnormalities. Haematologica. 0. PMID 33121234 DOI: 10.3324/haematol.2020.260158 |
0.216 |
|
| 2022 |
Francis HS, Harold CL, Beagrie RA, King AJ, Gosden ME, Blayney JW, Jeziorska DM, Babbs C, Higgs DR, Kassouf MT. Scalable in vitro production of defined mouse erythroblasts. Plos One. 17: e0261950. PMID 34995303 DOI: 10.1371/journal.pone.0261950 |
0.21 |
|
| 2020 |
Miar A, Arnaiz E, Bridges E, Beedie S, Cribbs AP, Downes DJ, Beagrie RA, Rehwinkel J, Harris AL. Hypoxia induces transcriptional and translational downregulation of the type I interferon (IFN) pathway in multiple cancer cell types. Cancer Research. PMID 33115807 DOI: 10.1158/0008-5472.CAN-19-2306 |
0.199 |
|
| 2021 |
Herrmann JC, Beagrie RA, Hughes JR. Making connections: enhancers in cellular differentiation. Trends in Genetics : Tig. PMID 34753603 DOI: 10.1016/j.tig.2021.10.008 |
0.12 |
|
| 2020 |
Oudelaar AM, Beagrie RA, Kassouf MT, Higgs DR. The mouse alpha-globin cluster: a paradigm for studying genome regulation and organization. Current Opinion in Genetics & Development. 67: 18-24. PMID 33221670 DOI: 10.1016/j.gde.2020.10.003 |
0.12 |
|
| Hide low-probability matches. |