Holly C. Beale - Publications

Affiliations: 
California Institute of Technology, Pasadena, CA 

1/18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2005 Shimoide A, Yoon I, Fuse M, Beale HC, Singh R. Automated behavioral phenotype detection and analysis using color-based motion tracking Proceedings - 2nd Canadian Conference On Computer and Robot Vision, Crv 2005. 370-377. DOI: 10.1109/CRV.2005.20  0.312
Low-probability matches (unlikely to be authored by this person)
2005 Kennedy MB, Beale HC, Carlisle HJ, Washburn LR. Integration of biochemical signalling in spines. Nature Reviews. Neuroscience. 6: 423-34. PMID 15928715 DOI: 10.1038/Nrn1685  0.205
2012 Schoenebeck JJ, Hutchinson SA, Byers A, Beale HC, Carrington B, Faden DL, Rimbault M, Decker B, Kidd JM, Sood R, Boyko AR, Fondon JW, Wayne RK, Bustamante CD, Ciruna B, et al. Variation of BMP3 contributes to dog breed skull diversity. Plos Genetics. 8: e1002849. PMID 22876193 DOI: 10.1371/Journal.Pgen.1002849  0.143
2020 Pfeil J, Sanders LM, Anastopoulos I, Lyle AG, Weinstein AS, Xue Y, Blair A, Beale HC, Lee A, Leung SG, Dinh PT, Shah AT, Breese MR, Devine WP, Bjork I, et al. Hydra: A mixture modeling framework for subtyping pediatric cancer cohorts using multimodal gene expression signatures. Plos Computational Biology. 16: e1007753. PMID 32275708 DOI: 10.1371/Journal.Pcbi.1007753  0.102
2022 Sanders LM, Chandra R, Zebarjadi N, Beale HC, Lyle AG, Rodriguez A, Kephart ET, Pfeil J, Cheney A, Learned K, Currie R, Gitlin L, Vengerov D, Haussler D, Salama SR, et al. Machine learning multi-omics analysis reveals cancer driver dysregulation in pan-cancer cell lines compared to primary tumors. Communications Biology. 5: 1367. PMID 36513728 DOI: 10.1038/s42003-022-04075-4  0.1
2012 Beale H, Ostrander EA. Sizing up dogs. Current Biology : Cb. 22: R315-6. PMID 22575471 DOI: 10.1016/J.Cub.2012.02.013  0.089
2020 Sanders LM, Cheney A, Seninge L, van den Bout A, Chen M, Beale HC, Kephart ET, Pfeil J, Learned K, Lyle AG, Bjork I, Haussler D, Salama SR, Vaske OM. Identification of a differentiation stall in epithelial mesenchymal transition in histone H3-mutant diffuse midline glioma. Gigascience. 9. PMID 33319914 DOI: 10.1093/gigascience/giaa136  0.089
2019 Learned K, Durbin A, Currie R, Kephart ET, Beale HC, Sanders LM, Pfeil J, Goldstein TC, Salama SR, Haussler D, Vaske OM, Bjork IM. Barriers to accessing public cancer genomic data. Scientific Data. 6: 98. PMID 31222016 DOI: 10.1038/S41597-019-0096-4  0.085
2012 Ostrander EA, Beale HC. Leading the way: finding genes for neurologic disease in dogs using genome-wide mRNA sequencing. Bmc Genetics. 13: 56. PMID 22781504 DOI: 10.1186/1471-2156-13-56  0.083
2022 Chun-On P, Hinchie AM, Beale HC, Gil Silva AA, Rush E, Sander C, Connelly CJ, Seynnaeve BKN, Kirkwood JM, Vaske OM, Greider CW, Alder JK. TPP1 promoter mutations cooperate with TERT promoter mutations to lengthen telomeres in melanoma. Science (New York, N.Y.). 378: 664-668. PMID 36356143 DOI: 10.1126/science.abq0607  0.08
2014 Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Beale H, Ramirez O, Hormozdiari F, Alkan C, Vilà C, et al. Genome sequencing highlights the dynamic early history of dogs. Plos Genetics. 10: e1004016. PMID 24453982 DOI: 10.1371/Journal.Pgen.1004016  0.078
2021 Reed MR, Lyle AG, De Loose A, Maddukuri L, Learned K, Beale HC, Kephart ET, Cheney A, van den Bout A, Lee MP, Hundley KN, Smith AM, DesRochers TM, Vibat CRT, Gokden M, et al. A Functional Precision Medicine Pipeline Combines Comparative Transcriptomics and Tumor Organoid Modeling to Identify Bespoke Treatment Strategies for Glioblastoma. Cells. 10. PMID 34943910 DOI: 10.3390/cells10123400  0.076
2013 Rimbault M, Beale HC, Schoenebeck JJ, Hoopes BC, Allen JJ, Kilroy-Glynn P, Wayne RK, Sutter NB, Ostrander EA. Derived variants at six genes explain nearly half of size reduction in dog breeds. Genome Research. 23: 1985-95. PMID 24026177 DOI: 10.1101/Gr.157339.113  0.076
2016 Lyons LA, Creighton EK, Alhaddad H, Beale HC, Grahn RA, Rah H, Maggs DJ, Helps CR, Gandolfi B. Whole genome sequencing in cats, identifies new models for blindness in AIPL1 and somite segmentation in HES7. Bmc Genomics. 17: 265. PMID 27030474 DOI: 10.1186/S12864-016-2595-4  0.048
2019 Vaske OM, Bjork I, Salama SR, Beale H, Tayi Shah A, Sanders L, Pfeil J, Lam DL, Learned K, Durbin A, Kephart ET, Currie R, Newton Y, Swatloski T, McColl D, et al. Comparative Tumor RNA Sequencing Analysis for Difficult-to-Treat Pediatric and Young Adult Patients With Cancer. Jama Network Open. 2: e1913968. PMID 31651965 DOI: 10.1001/jamanetworkopen.2019.13968  0.047
2021 Beale HC, Roger JM, Cattle MA, McKay LT, Thompson DKA, Learned K, Lyle AG, Kephart ET, Currie R, Lam DL, Sanders L, Pfeil J, Vivian J, Bjork I, Salama SR, et al. The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets. Gigascience. 10. PMID 33712853 DOI: 10.1093/gigascience/giab011  0.041
2020 Vivian J, Eizenga JM, Beale HC, Vaske OM, Paten B. Bayesian Framework for Detecting Gene Expression Outliers in Individual Samples. Jco Clinical Cancer Informatics. 4: 160-170. PMID 32097024 DOI: 10.1200/CCI.19.00095  0.036
2019 Sanders LM, Rangaswami A, Bjork I, Lam DL, Beale HC, Kephart ET, Durbin A, Learned K, Currie R, Lyle AG, Pfeil J, Shah AT, Lee AG, Leung SG, Behroozfard IH, et al. Comparative RNA-seq analysis aids in diagnosis of a rare pediatric tumor. Cold Spring Harbor Molecular Case Studies. 5. PMID 31645344 DOI: 10.1101/mcs.a004317  0.027
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