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Eli R. Zunder, Ph.D. - Publications

Affiliations: 
2008 Biophysics University of California, San Francisco, San Francisco, CA 
Area:
signal transduction pathways in cells and whole organisms
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14/27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Deppmann CD, Zunder ER. The good, the bald, and the hairy: A mechanosensor meets its fate at the target. Developmental Cell. 58: 2013-2014. PMID 37875070 DOI: 10.1016/j.devcel.2023.08.027  0.587
2023 Vradenburgh SA, Van Deusen AL, Beachum AN, Moats JM, Hirt AK, Deppmann CD, Keeler AB, Zunder ER. Sexual dimorphism in the dorsal root ganglia of neonatal mice identified by protein expression profiling with single-cell mass cytometry. Molecular and Cellular Neurosciences. 103866. PMID 37263459 DOI: 10.1016/j.mcn.2023.103866  0.654
2022 Keeler AB, Van Deusen AL, Gadani IC, Williams CM, Goggin SM, Hirt AK, Vradenburgh SA, Fread KI, Puleo EA, Jin L, Calhan OY, Deppmann CD, Zunder ER. A developmental atlas of somatosensory diversification and maturation in the dorsal root ganglia by single-cell mass cytometry. Nature Neuroscience. 25: 1543-1558. PMID 36303068 DOI: 10.1038/s41593-022-01181-8  0.668
2020 Alencar GF, Owsiany KM, K S, Sukhavasi K, Mocci G, Nguyen A, Williams CM, Shamsuzzaman S, Mokry M, Henderson CA, Haskins R, Baylis RA, Finn AV, McNamara CA, Zunder ER, et al. The Stem Cell Pluripotency Genes Klf4 and Oct4 Regulate Complex SMC Phenotypic Changes Critical in Late-Stage Atherosclerotic Lesion Pathogenesis. Circulation. PMID 32674599 DOI: 10.1161/Circulationaha.120.046672  0.306
2020 Ko ME, Williams CM, Fread KI, Goggin SM, Rustagi RS, Fragiadakis GK, Nolan GP, Zunder ER. FLOW-MAP: a graph-based, force-directed layout algorithm for trajectory mapping in single-cell time course datasets. Nature Protocols. PMID 31932774 DOI: 10.1038/S41596-019-0246-3  0.321
2018 Balogh P, Capaldo B, Singh S, Elagib K, Li H, Zunder E, Figueroa ME, Pang W, Goldfarb A. Dysregulation of RUNX3 in Aged Human HSPCs May Contribute to Perturbations in Erythropoiesis and Balanced Lineage Output Blood. 132: 2553-2553. DOI: 10.1182/Blood-2018-99-115245  0.344
2016 Frei AP, Bava FA, Zunder ER, Hsieh EW, Chen SY, Nolan GP, Gherardini PF. Highly multiplexed simultaneous detection of RNAs and proteins in single cells. Nature Methods. PMID 26808670 DOI: 10.1038/Nmeth.3742  0.356
2015 Levine JH, Simonds EF, Bendall SC, Davis KL, Amir ED, Tadmor MD, Litvin O, Fienberg HG, Jager A, Zunder ER, Finck R, Gedman AL, Radtke I, Downing JR, Pe'er D, et al. Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis. Cell. PMID 26095251 DOI: 10.1016/J.Cell.2015.05.047  0.357
2015 Lujan E, Zunder ER, Ng YH, Goronzy IN, Nolan GP, Wernig M. Early reprogramming regulators identified by prospective isolation and mass cytometry. Nature. 521: 352-6. PMID 25830878 DOI: 10.1038/Nature14274  0.355
2015 Zunder ER, Lujan E, Goltsev Y, Wernig M, Nolan GP. A continuous molecular roadmap to iPSC reprogramming through progression analysis of single-cell mass cytometry. Cell Stem Cell. 16: 323-37. PMID 25748935 DOI: 10.1016/J.Stem.2015.01.015  0.307
2012 Bodenmiller B, Zunder ER, Finck R, Chen TJ, Savig ES, Bruggner RV, Simonds EF, Bendall SC, Sachs K, Krutzik PO, Nolan GP. Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators. Nature Biotechnology. 30: 858-67. PMID 22902532 DOI: 10.1038/Nbt.2317  0.376
2012 Cheng CK, Gustafson WC, Charron E, Houseman BT, Zunder E, Goga A, Gray NS, Pollok B, Oakes SA, James CD, Shokat KM, Weiss WA, Fan QW. Dual blockade of lipid and cyclin-dependent kinases induces synthetic lethality in malignant glioma. Proceedings of the National Academy of Sciences of the United States of America. 109: 12722-7. PMID 22802621 DOI: 10.1073/Pnas.1202492109  0.678
2008 Zunder ER, Knight ZA, Houseman BT, Apsel B, Shokat KM. Discovery of drug-resistant and drug-sensitizing mutations in the oncogenic PI3K isoform p110 alpha. Cancer Cell. 14: 180-92. PMID 18691552 DOI: 10.1016/J.Ccr.2008.06.014  0.657
2006 Knight ZA, Gonzalez B, Feldman ME, Zunder ER, Goldenberg DD, Williams O, Loewith R, Stokoe D, Balla A, Toth B, Balla T, Weiss WA, Williams RL, Shokat KM. A pharmacological map of the PI3-K family defines a role for p110alpha in insulin signaling. Cell. 125: 733-47. PMID 16647110 DOI: 10.1016/J.Cell.2006.03.035  0.652
Low-probability matches (unlikely to be authored by this person)
2015 Zunder ER, Finck R, Behbehani GK, Amir el-AD, Krishnaswamy S, Gonzalez VD, Lorang CG, Bjornson Z, Spitzer MH, Bodenmiller B, Fantl WJ, Pe'er D, Nolan GP. Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm. Nature Protocols. 10: 316-33. PMID 25612231 DOI: 10.1038/Nprot.2015.020  0.295
2017 Han G, Chen SY, Gonzalez VD, Zunder ER, Fantl WJ, Nolan GP. Atomic mass tag of bismuth-209 for increasing the immunoassay multiplexing capacity of mass cytometry. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 91: 1150-1163. PMID 29205767 DOI: 10.1002/Cyto.A.23283  0.292
2019 Balogh P, Adelman ER, Pluvinage JV, Capaldo BJ, Freeman KC, Singh S, Elagib KE, Nakamura Y, Kurita R, Sashida G, Zunder ER, Li H, Gru AA, Price EA, Schrier SL, et al. RUNX3 levels in human hematopoietic progenitors are regulated by aging and dictate erythroid-myeloid balance. Haematologica. PMID 31171641 DOI: 10.3324/Haematol.2018.208918  0.283
2015 Spitzer MH, Gherardini PF, Fragiadakis GK, Bhattacharya N, Yuan RT, Hotson AN, Finck R, Carmi Y, Zunder ER, Fantl WJ, Bendall SC, Engleman EG, Nolan GP. IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system. Science (New York, N.Y.). 349: 1259425. PMID 26160952 DOI: 10.1126/Science.1259425  0.281
2014 Behbehani GK, Thom C, Zunder ER, Finck R, Gaudilliere B, Fragiadakis GK, Fantl WJ, Nolan GP. Transient partial permeabilization with saponin enables cellular barcoding prior to surface marker staining. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 85: 1011-9. PMID 25274027 DOI: 10.1002/Cyto.A.22573  0.259
2018 Lammert CR, Frost EL, Bolte AC, Paysour MJ, Shaw ME, Bellinger CE, Weigel TK, Zunder ER, Lukens JR. Cutting Edge: Critical Roles for Microbiota-Mediated Regulation of the Immune System in a Prenatal Immune Activation Model of Autism. Journal of Immunology (Baltimore, Md. : 1950). PMID 29967099 DOI: 10.4049/Jimmunol.1701755  0.207
2016 Fread KI, Strickland WD, Nolan GP, Zunder ER. AN UPDATED DEBARCODING TOOL FOR MASS CYTOMETRY WITH CELL TYPE-SPECIFIC AND CELL SAMPLE-SPECIFIC STRINGENCY ADJUSTMENT. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 22: 588-598. PMID 27897009  0.154
2023 Zimyanin VL, Pielka AM, Glaß H, Japtok J, Großmann D, Martin M, Deussen A, Szewczyk B, Deppmann C, Zunder E, Andersen PM, Boeckers TM, Sterneckert J, Redemann S, Storch A, et al. Live Cell Imaging of ATP Levels Reveals Metabolic Compartmentalization within Motoneurons and Early Metabolic Changes in ALS Motoneurons. Cells. 12. PMID 37408187 DOI: 10.3390/cells12101352  0.135
2021 Kothari H, Williams CM, McSkimming C, Drago F, Marshall MA, Garmey J, Vigneshwar M, Zunder ER, McNamara CA. Identification of human immune cell subtypes most responsive to IL-1β-induced inflammatory signaling using mass cytometry. Science Signaling. 14. PMID 33688079 DOI: 10.1126/scisignal.abc5763  0.128
2021 Le Q, Madhu V, Hart JM, Farber CR, Zunder ER, Dighe AS, Cui Q. Current evidence on potential of adipose derived stem cells to enhance bone regeneration and future projection. World Journal of Stem Cells. 13: 1248-1277. PMID 34630861 DOI: 10.4252/wjsc.v13.i9.1248  0.108
2023 Goggin SM, Zunder ER. A hyperparameter-randomized ensemble approach for robust clustering across diverse datasets. Biorxiv : the Preprint Server For Biology. PMID 38187667 DOI: 10.1101/2023.12.18.571953  0.074
2023 Karnewar S, Karnewar V, Deaton R, Shankman LS, Benavente ED, Williams CM, Bradley X, Alencar GF, Bulut GB, Kirmani S, Baylis RA, Zunder ER, den Ruijter HM, Pasterkamp G, Owens GK. IL-1β inhibition partially negates the beneficial effects of diet-induced lipid lowering. Biorxiv : the Preprint Server For Biology. PMID 37873280 DOI: 10.1101/2023.10.13.562255  0.068
2023 McColl LF, Chen X, Solga MD, Schlegel K, Haughey SP, Lobo PI, Fread K, Zunder E, Cha R, Park S, Christophel JJ, Cui Q, Dighe AS. BMP-6 promotes type 2 immune response during enhancement of rat mandibular bone defect healing. Frontiers in Immunology. 14: 1064238. PMID 36845161 DOI: 10.3389/fimmu.2023.1064238  0.061
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