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Jessica E. Prenni - Publications

Affiliations: 
2009-2013 Biochemistry and Molecular Biology Colorado State University, Fort Collins, CO 
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54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Brasier N, Widmer A, Osthoff M, Mutke M, De Ieso F, Brasier-Lutz P, Wolfe L, Aithal V, Broeckling CD, Prenni J, Eckstein J. Non-invasive Drug Monitoring of β-Lactam Antibiotics Using Sweat Analysis-A Pilot Study. Frontiers in Medicine. 7: 476. PMID 32984371 DOI: 10.3389/Fmed.2020.00476  0.303
2020 Zhai C, Djimsa BA, Brown K, Prenni JE, Woerner DR, Belk KE, Nair MN. Tandem mass tagged dataset used to characterize muscle-specific proteome changes in beef during early postmortem period. Data in Brief. 32: 106064. PMID 32775575 DOI: 10.1016/J.Dib.2020.106064  0.418
2020 Le CH, Benage LG, Specht KS, Li Puma LC, Mulligan CM, Heuberger AL, Prenni JE, Claypool SM, Chatfield KC, Sparagna GC, Chicco AJ. Tafazzin deficiency impairs CoA-dependent oxidative metabolism in cardiac mitochondria. The Journal of Biological Chemistry. PMID 32665401 DOI: 10.1074/Jbc.Ra119.011229  0.311
2020 Zhai C, Djimsa BA, Prenni JE, Woerner DR, Belk KE, Nair MN. Tandem mass tag labeling to characterize muscle-specific proteome changes in beef during early postmortem period. Journal of Proteomics. 222: 103794. PMID 32330628 DOI: 10.1016/J.Jprot.2020.103794  0.378
2019 Davis HE, Badger CD, Brophy P, Geornaras I, Burnett TJ, Scanga J, Belk K, Prenni J. Quantification of ractopamine residues on and in beef digestive tract tissues. Journal of Animal Science. PMID 31410462 DOI: 10.1093/Jas/Skz263  0.301
2019 Yao L, Sheflin AM, Broeckling CD, Prenni JE. Data Processing for GC-MS- and LC-MS-Based Untargeted Metabolomics. Methods in Molecular Biology (Clifton, N.J.). 1978: 287-299. PMID 31119670 DOI: 10.1007/978-1-4939-9236-2_18  0.427
2019 Gredell DA, Schroeder AR, Belk KE, Broeckling CD, Heuberger AL, Kim SY, King DA, Shackelford SD, Sharp JL, Wheeler TL, Woerner DR, Prenni JE. Comparison of Machine Learning Algorithms for Predictive Modeling of Beef Attributes Using Rapid Evaporative Ionization Mass Spectrometry (REIMS) Data. Scientific Reports. 9: 5721. PMID 30952873 DOI: 10.1038/S41598-019-40927-6  0.315
2019 Sheflin AM, Kirkwood JS, Wolfe LM, Jahn CE, Broeckling CD, Schachtman DP, Prenni JE. High-throughput quantitative analysis of phytohormones in sorghum leaf and root tissue by ultra-performance liquid chromatography-mass spectrometry. Analytical and Bioanalytical Chemistry. PMID 30879116 DOI: 10.1007/S00216-019-01658-9  0.396
2018 Salihovic S, Fall T, Ganna A, Broeckling CD, Prenni JE, Hyötyläinen T, Kärrman A, Lind PM, Ingelsson E, Lind L. Identification of metabolic profiles associated with human exposure to perfluoroalkyl substances. Journal of Exposure Science & Environmental Epidemiology. PMID 30185940 DOI: 10.1038/S41370-018-0060-Y  0.411
2018 Broeckling CD, Hoyes E, Richardson K, Brown JM, Prenni JE. DataSet-Dependent Acquisition enables comprehensive tandem mass spectrometry coverage of complex samples. Analytical Chemistry. PMID 29846054 DOI: 10.1021/Acs.Analchem.8B00929  0.435
2018 Nieto R LM, Mehaffy C, Islam MN, Fitzgerald B, Belisle J, Prenni J, Dobos KM. Biochemical characterization of isoniazid resistant : can the analysis of clonal strains reveal novel targetable pathways? Molecular & Cellular Proteomics : McP. PMID 29844232 DOI: 10.1074/Mcp.Ra118.000821  0.401
2018 Chicco AJ, Le CH, Gnaiger E, Dreyer HC, Muyskens JB, D'Alessandro A, Nemkov T, Hocker AD, Prenni JE, Wolfe LM, Sindt NM, Lovering AT, Subudhi AW, Roach RC. Adaptive remodeling of skeletal muscle energy metabolism in high-altitude hypoxia: Lessons from AltitudeOmics. The Journal of Biological Chemistry. PMID 29540485 DOI: 10.1074/Jbc.Ra117.000470  0.34
2018 Robison FM, Turner M, Jahn CE, Schwartz HF, Prenni JE, Brick MA, Heuberger AL. Common bean varieties demonstrate differential physiological and metabolic responses to the pathogenic fungus Sclerotinia sclerotiorum. Plant, Cell & Environment. PMID 29476531 DOI: 10.1111/Pce.13176  0.322
2018 Brophy P, Broeckling CD, Murphy J, Prenni JE. Ion-neutral Clustering of Bile Acids in Electrospray Ionization Across UPLC Flow Regimes. Journal of the American Society For Mass Spectrometry. PMID 29427066 DOI: 10.1007/S13361-017-1878-6  0.352
2018 Broeckling CD, Prenni JE. Stacked Injections of Biphasic Extractions for Improved Metabolomic Coverage and Sample Throughput. Analytical Chemistry. PMID 29231702 DOI: 10.1021/Acs.Analchem.7B03654  0.355
2017 Sindt NM, Robison F, Brick MA, Schwartz HF, Heuberger AL, Prenni JE. MALDI-TOF-MS with PLS Modeling Enables Strain Typing of the Bacterial Plant Pathogen Xanthomonas axonopodis. Journal of the American Society For Mass Spectrometry. PMID 29181812 DOI: 10.1007/S13361-017-1839-0  0.411
2017 Romero JJ, Liebig BE, Broeckling CD, Prenni JE, Hansen TR. Pregnancy-induced changes in metabolome and proteome in ovine uterine flushings. Biology of Reproduction. 97: 273-287. PMID 29044433 DOI: 10.1093/Biolre/Iox078  0.421
2017 Hoxmeier JC, Fleshman AC, Broeckling CD, Prenni JE, Dolan MC, Gage KL, Eisen L. Metabolomics of the tick-Borrelia interaction during the nymphal tick blood meal. Scientific Reports. 7: 44394. PMID 28287618 DOI: 10.1038/Srep44394  0.332
2016 Kirkwood JS, Broeckling CD, Donahue S, Prenni JE. A novel microflow LC-MS method for the quantitation of endocannabinoids in serum. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1033: 271-277. PMID 27592285 DOI: 10.1016/J.Jchromb.2016.08.035  0.389
2016 Broeckling CD, Ganna A, Layer MC, Brown K, Sutton B, Ingelsson E, Peers G, Prenni JE. The 1-SToP Approach to Annotation of LC-MS Metabolomics Data. Analytical Chemistry. PMID 27560453 DOI: 10.1021/Acs.Analchem.6B02479  0.441
2016 Turner MF, Heuberger AL, Kirkwood JS, Collins CC, Wolfrum EJ, Broeckling CD, Prenni JE, Jahn CE. Non-targeted Metabolomics in Diverse Sorghum Breeding Lines Indicates Primary and Secondary Metabolite Profiles Are Associated with Plant Biomass Accumulation and Photosynthesis. Frontiers in Plant Science. 7: 953. PMID 27462319 DOI: 10.3389/Fpls.2016.00953  0.309
2016 Krisher RL, Lyons S, Greene A, Stevens JM, Herrick J, Kirkwood J, Prenni J, Broeckling C, Schoolcraft WB. A novel, highly sensitive tandem mass spectrometry metabolomics approach predicts outcome of poor quality day 5 blastocysts Fertility and Sterility. 106. DOI: 10.1016/J.Fertnstert.2016.07.1016  0.311
2016 Ganna A, Fall T, Salihovic S, Lee W, Broeckling CD, Kumar J, Hägg S, Stenemo M, Magnusson PKE, Prenni JE, Lind L, Pawitan Y, Ingelsson E. Large-scale non-targeted metabolomic profiling in three human population-based studies Metabolomics. 12: 1-13. DOI: 10.1007/S11306-015-0893-5  0.39
2015 Robison FM, Heuberger AL, Brick MA, Prenni JE. Proteome Characterization of Leaves in Common Bean. Proteomes. 3: 236-248. PMID 28248269 DOI: 10.3390/Proteomes3030236  0.36
2015 Abate-Pella D, Freund DM, Ma Y, Simón-Manso Y, Hollender J, Broeckling CD, Huhman DV, Krokhin OV, Stoll DR, Hegeman AD, Kind T, Fiehn O, Schymanski EL, Prenni JE, Sumner LW, et al. Retention projection enables accurate calculation of liquid chromatographic retention times across labs and methods. Journal of Chromatography. A. 1412: 43-51. PMID 26292625 DOI: 10.1016/J.Chroma.2015.07.108  0.721
2015 Szerlong HJ, Herman JA, Krause CM, DeLuca JG, Skoultchi A, Winger QA, Prenni JE, Hansen JC. Proteomic characterization of the nucleolar linker histone H1 interaction network. Journal of Molecular Biology. 427: 2056-71. PMID 25584861 DOI: 10.1016/J.Jmb.2015.01.001  0.316
2014 Webb KM, Broccardo CJ, Prenni JE, Wintermantel WM. Proteomic Profiling of Sugar Beet (Beta vulgaris) Leaves during Rhizomania Compatible Interactions. Proteomes. 2: 208-223. PMID 28250378 DOI: 10.3390/Proteomes2020208  0.363
2014 Heuberger AL, Robison FM, Lyons SM, Broeckling CD, Prenni JE. Evaluating plant immunity using mass spectrometry-based metabolomics workflows. Frontiers in Plant Science. 5: 291. PMID 25009545 DOI: 10.3389/Fpls.2014.00291  0.359
2014 Broeckling CD, Afsar FA, Neumann S, Ben-Hur A, Prenni JE. RAMClust: A novel feature clustering method enables spectral-matching-based annotation for metabolomics data Analytical Chemistry. 86: 6812-6817. PMID 24927477 DOI: 10.1021/Ac501530D  0.43
2014 Brandt LE, Ehrhart EJ, Scherman H, Olver CS, Bohn AA, Prenni JE. Characterization of the canine urinary proteome. Veterinary Clinical Pathology / American Society For Veterinary Clinical Pathology. 43: 193-205. PMID 24773128 DOI: 10.1111/Vcp.12147  0.326
2014 Heuberger AL, Broeckling CD, Kirkpatrick KR, Prenni JE. Application of nontargeted metabolite profiling to discover novel markers of quality traits in an advanced population of malting barley. Plant Biotechnology Journal. 12: 147-60. PMID 24119106 DOI: 10.1111/Pbi.12122  0.345
2014 Broccardo CJ, Hussey GS, Goehring L, Lunn P, Prenni JE. Proteomic characterization of equine cerebrospinal fluid Journal of Equine Veterinary Science. 34: 451-458. DOI: 10.1016/J.Jevs.2013.07.013  0.319
2013 Barnes BB, Wilson MB, Carr PW, Vitha MF, Broeckling CD, Heuberger AL, Prenni J, Janis GC, Corcoran H, Snow NH, Chopra S, Dhandapani R, Tawfall A, Sumner LW, Boswell PG. "Retention projection" enables reliable use of shared gas chromatographic retention data across laboratories, instruments, and methods. Analytical Chemistry. 85: 11650-7. PMID 24205931 DOI: 10.1021/Ac4033615  0.406
2013 Broccardo CJ, Schauer KL, Kohrt WM, Schwartz RS, Murphy JP, Prenni JE. Multiplexed analysis of steroid hormones in human serum using novel microflow tile technology and LC-MS/MS. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 934: 16-21. PMID 23891914 DOI: 10.1016/J.Jchromb.2013.06.031  0.432
2013 Schauer KL, Broccardo CJ, Webb KM, Covey PA, Prenni JE. Mass spectrometry contamination from Tinuvin 770, a common additive in laboratory plastics. Journal of Biomolecular Techniques : Jbt. 24: 57-61. PMID 23814497 DOI: 10.7171/Jbt.13-2402-004  0.421
2013 Schauer KL, Freund DM, Prenni JE, Curthoys NP. Proteomic profiling and pathway analysis of the response of rat renal proximal convoluted tubules to metabolic acidosis. American Journal of Physiology. Renal Physiology. 305: F628-40. PMID 23804448 DOI: 10.1152/Ajprenal.00210.2013  0.771
2013 Freund DM, Prenni JE, Curthoys NP. Proteomic profiling of the mitochondrial inner membrane of rat renal proximal convoluted tubules. Proteomics. 13: 2495-9. PMID 23780708 DOI: 10.1002/Pmic.201200558  0.761
2013 Broeckling CD, Heuberger AL, Prenni JE. Large scale non-targeted metabolomic profiling of serum by ultra performance liquid chromatography-mass spectrometry (UPLC-MS). Journal of Visualized Experiments : Jove. e50242. PMID 23524330 DOI: 10.3791/50242  0.478
2013 Shen M, Broeckling CD, Chu EY, Ziegler G, Baxter IR, Prenni JE, Hoekenga OA. Leveraging non-targeted metabolite profiling via statistical genomics. Plos One. 8: e57667. PMID 23469044 DOI: 10.1371/Journal.Pone.0057667  0.302
2013 Freund DM, Prenni JE. Improved detection of quantitative differences using a combination of spectral counting and MS/MS total ion current. Journal of Proteome Research. 12: 1996-2004. PMID 23445521 DOI: 10.1021/Pr400100K  0.774
2013 Kalashnikova AA, Winkler DD, McBryant SJ, Henderson RK, Herman JA, DeLuca JG, Luger K, Prenni JE, Hansen JC. Linker histone H1.0 interacts with an extensive network of proteins found in the nucleolus. Nucleic Acids Research. 41: 4026-35. PMID 23435226 DOI: 10.1093/Nar/Gkt104  0.315
2013 Hong MG, Karlsson R, Magnusson PK, Lewis MR, Isaacs W, Zheng LS, Xu J, Grönberg H, Ingelsson E, Pawitan Y, Broeckling C, Prenni JE, Wiklund F, Prince JA. A genome-wide assessment of variability in human serum metabolism. Human Mutation. 34: 515-24. PMID 23281178 DOI: 10.1002/Humu.22267  0.348
2013 Freund DM, Prenni JE, Curthoys NP. Response of the mitochondrial proteome of rat renal proximal convoluted tubules to chronic metabolic acidosis. American Journal of Physiology. Renal Physiology. 304: F145-55. PMID 23136003 DOI: 10.1152/Ajprenal.00526.2012  0.749
2013 Broeckling CD, Heuberger AL, Prince JA, Ingelsson E, Prenni JE. Assigning precursor-product ion relationships in indiscriminant MS/MS data from non-targeted metabolite profiling studies Metabolomics. 9: 33-43. DOI: 10.1007/S11306-012-0426-4  0.455
2012 Prenni JE, Vidal M, Olver CS. Preliminary characterization of the murine membrane reticulocyte proteome. Blood Cells, Molecules & Diseases. 49: 74-82. PMID 22633119 DOI: 10.1016/J.Bcmd.2012.05.002  0.358
2012 Cho YS, Dobos KM, Prenni J, Yang H, Hess A, Rosenkrands I, Andersen P, Ryoo SW, Bai GH, Brennan MJ, Izzo A, Bielefeldt-Ohmann H, Belisle JT. Deciphering the proteome of the in vivo diagnostic reagent "purified protein derivative" from Mycobacterium tuberculosis. Proteomics. 12: 979-91. PMID 22522804 DOI: 10.1002/Pmic.201100544  0.33
2011 Goldstrohm DA, Broeckling CD, Prenni JE, Curthoys NP. Importance of manual validation for the identification of phosphopeptides using a linear ion trap mass spectrometer. Journal of Biomolecular Techniques : Jbt. 22: 10-20. PMID 21455477  0.626
2011 Ryan EP, Heuberger AL, Weir TL, Barnett B, Broeckling CD, Prenni JE. Rice bran fermented with saccharomyces boulardii generates novel metabolite profiles with bioactivity. Journal of Agricultural and Food Chemistry. 59: 1862-70. PMID 21306106 DOI: 10.1021/Jf1038103  0.383
2010 Walmsley SJ, Broeckling C, Hess A, Prenni J, Curthoys NP. Proteomic analysis of brush-border membrane vesicles isolated from purified proximal convoluted tubules. American Journal of Physiology. Renal Physiology. 298: F1323-31. PMID 20219825 DOI: 10.1152/Ajprenal.00711.2009  0.651
2010 Mehaffy C, Hess A, Prenni JE, Mathema B, Kreiswirth B, Dobos KM. Descriptive proteomic analysis shows protein variability between closely related clinical isolates of Mycobacterium tuberculosis. Proteomics. 10: 1966-84. PMID 20217870 DOI: 10.1002/Pmic.200900836  0.405
2007 Prenni JE, Avery AC, Olver CS. Proteomics: a review and an example using the reticulocyte membrane proteome. Veterinary Clinical Pathology / American Society For Veterinary Clinical Pathology. 36: 13-24. PMID 17311189 DOI: 10.1111/J.1939-165X.2007.Tb00176.X  0.389
2006 Dooley GP, Prenni JE, Prentiss PL, Cranmer BK, Andersen ME, Tessari JD. Identification of a novel hemoglobin adduct in Sprague Dawley rats exposed to atrazine. Chemical Research in Toxicology. 19: 692-700. PMID 16696572 DOI: 10.1021/Tx060023C  0.354
2003 Go EP, Prenni JE, Wei J, Jones A, Hall SC, Witkowska HE, Shen Z, Siuzdak G. Desorption/ionization on silicon time-of-flight/time-of-flight mass spectrometry. Analytical Chemistry. 75: 2504-6. PMID 12918997 DOI: 10.1021/Ac026253N  0.432
2003 Prenni JE, Shen Z, Trauger S, Chen W, Siuzdak G. Protein characterization using Liquid Chromatography Desorption Ionization on Silicon Mass Spectrometry (LC-DIOS-MS) Spectroscopy. 17: 693-698. DOI: 10.1155/2003/172838  0.448
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