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Naoshige Uchida - Publications

Affiliations: 
Molecular & Cellular Biology Harvard University, Cambridge, MA, United States 
Area:
Olfaction
Website:
http://www.fas.harvard.edu/~biophys/Naoshige_Uchida.htm
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85 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Gershman SJ, Assad JA, Datta SR, Linderman SW, Sabatini BL, Uchida N, Wilbrecht L. Explaining dopamine through prediction errors and beyond. Nature Neuroscience. PMID 39054370 DOI: 10.1038/s41593-024-01705-4  0.723
2024 Qian L, Burrell M, Hennig JA, Matias S, Murthy VN, Gershman SJ, Uchida N. The role of prospective contingency in the control of behavior and dopamine signals during associative learning. Biorxiv : the Preprint Server For Biology. PMID 38370735 DOI: 10.1101/2024.02.05.578961  0.842
2024 Amo R, Uchida N, Watabe-Uchida M. Glutamate inputs send prediction error of reward, but not negative value of aversive stimuli, to dopamine neurons. Neuron. 112: 1001-1019.e6. PMID 38278147 DOI: 10.1016/j.neuron.2023.12.019  0.379
2024 Tolooshams B, Matias S, Wu H, Temereanca S, Uchida N, Murthy VN, Masset P, Ba D. Interpretable deep learning for deconvolutional analysis of neural signals. Biorxiv : the Preprint Server For Biology. PMID 38260512 DOI: 10.1101/2024.01.05.574379  0.638
2024 Lowet AS, Zheng Q, Meng M, Matias S, Drugowitsch J, Uchida N. An opponent striatal circuit for distributional reinforcement learning. Biorxiv : the Preprint Server For Biology. PMID 38260354 DOI: 10.1101/2024.01.02.573966  0.836
2023 Masset P, Tano P, Kim HR, Malik AN, Pouget A, Uchida N. Multi-timescale reinforcement learning in the brain. Biorxiv : the Preprint Server For Biology. PMID 38014166 DOI: 10.1101/2023.11.12.566754  0.783
2023 Romero Pinto S, Uchida N. Tonic dopamine and biases in value learning linked through a biologically inspired reinforcement learning model. Biorxiv : the Preprint Server For Biology. PMID 38014087 DOI: 10.1101/2023.11.10.566580  0.821
2023 Amo R, Uchida N, Watabe-Uchida M. Glutamate inputs send prediction error of reward but not negative value of aversive stimuli to dopamine neurons. Biorxiv : the Preprint Server For Biology. PMID 37986868 DOI: 10.1101/2023.11.09.566472  0.376
2023 Bukwich M, Campbell MG, Zoltowski D, Kingsbury L, Tomov MS, Stern J, Kim HR, Drugowitsch J, Linderman SW, Uchida N. Competitive integration of time and reward explains value-sensitive foraging decisions and frontal cortex ramping dynamics. Biorxiv : the Preprint Server For Biology. PMID 37732217 DOI: 10.1101/2023.09.05.556267  0.739
2023 Hennig JA, Romero Pinto SA, Yamaguchi T, Linderman SW, Uchida N, Gershman SJ. Emergence of belief-like representations through reinforcement learning. Plos Computational Biology. 19: e1011067. PMID 37695776 DOI: 10.1371/journal.pcbi.1011067  0.804
2023 Liu D, Rahman M, Johnson A, Tsutsui-Kimura I, Pena N, Talay M, Logeman BL, Finkbeiner S, Choi S, Capo-Battaglia A, Abdus-Saboor I, Ginty DD, Uchida N, Watabe-Uchida M, Dulac C. A Hypothalamic Circuit Underlying the Dynamic Control of Social Homeostasis. Biorxiv : the Preprint Server For Biology. PMID 37293031 DOI: 10.1101/2023.05.19.540391  0.52
2023 Hennig JA, Romero Pinto SA, Yamaguchi T, Linderman SW, Uchida N, Gershman SJ. Emergence of belief-like representations through reinforcement learning. Biorxiv : the Preprint Server For Biology. PMID 37066383 DOI: 10.1101/2023.04.04.535512  0.804
2023 Markowitz JE, Gillis WF, Jay M, Wood J, Harris RW, Cieszkowski R, Scott R, Brann D, Koveal D, Kula T, Weinreb C, Osman MAM, Pinto SR, Uchida N, Linderman SW, et al. Spontaneous behaviour is structured by reinforcement without explicit reward. Nature. PMID 36653449 DOI: 10.1038/s41586-022-05611-2  0.613
2022 Akiti K, Tsutsui-Kimura I, Xie Y, Mathis A, Markowitz JE, Anyoha R, Datta SR, Mathis MW, Uchida N, Watabe-Uchida M. Striatal dopamine explains novelty-induced behavioral dynamics and individual variability in threat prediction. Neuron. PMID 36130595 DOI: 10.1016/j.neuron.2022.08.022  0.772
2022 Amo R, Matias S, Yamanaka A, Tanaka KF, Uchida N, Watabe-Uchida M. A gradual temporal shift of dopamine responses mirrors the progression of temporal difference error in machine learning. Nature Neuroscience. PMID 35798979 DOI: 10.1038/s41593-022-01109-2  0.826
2022 Mikhael JG, Kim HR, Uchida N, Gershman SJ. The role of state uncertainty in the dynamics of dopamine. Current Biology : Cb. PMID 35114098 DOI: 10.1016/j.cub.2022.01.025  0.752
2020 Tsutsui-Kimura I, Matsumoto H, Akiti K, Yamada MM, Uchida N, Watabe-Uchida M. Distinct temporal difference error signals in dopamine axons in three regions of the striatum in a decision-making task. Elife. 9. PMID 33345774 DOI: 10.7554/eLife.62390  0.391
2020 Kim HR, Malik AN, Mikhael JG, Bech P, Tsutsui-Kimura I, Sun F, Zhang Y, Li Y, Watabe-Uchida M, Gershman SJ, Uchida N. A Unified Framework for Dopamine Signals across Timescales. Cell. PMID 33248024 DOI: 10.1016/j.cell.2020.11.013  0.808
2020 Starkweather CK, Uchida N. Dopamine signals as temporal difference errors: recent advances. Current Opinion in Neurobiology. 67: 95-105. PMID 33186815 DOI: 10.1016/j.conb.2020.08.014  0.838
2020 Lowet AS, Zheng Q, Matias S, Drugowitsch J, Uchida N. Distributional Reinforcement Learning in the Brain. Trends in Neurosciences. PMID 33092893 DOI: 10.1016/j.tins.2020.09.004  0.797
2020 Lak A, Hueske E, Hirokawa J, Masset P, Ott T, Urai AE, Donner TH, Carandini M, Tonegawa S, Uchida N, Kepecs A. Confidence-guided updating of choice bias during perceptual decisions is a widespread behavioral phenomenon. Elife. 9. PMID 32286227 DOI: 10.7554/Elife.49834  0.712
2020 Dabney W, Kurth-Nelson Z, Uchida N, Starkweather CK, Hassabis D, Munos R, Botvinick M. A distributional code for value in dopamine-based reinforcement learning. Nature. 577: 671-675. PMID 31942076 DOI: 10.1038/S41586-019-1924-6  0.836
2020 Uchida N, Ikemoto S. Decision letter: Distinct signals in medial and lateral VTA dopamine neurons modulate fear extinction at different times Elife. DOI: 10.7554/Elife.54936.Sa1  0.466
2020 Lak A, Hueske E, Hirokawa J, Masset P, Ott T, Urai AE, Donner TH, Carandini M, Tonegawa S, Uchida N, Kepecs A. Author response: Reinforcement biases subsequent perceptual decisions when confidence is low, a widespread behavioral phenomenon Elife. DOI: 10.7554/Elife.49834.Sa2  0.657
2019 Gershman SJ, Uchida N. Believing in dopamine. Nature Reviews. Neuroscience. PMID 31570826 DOI: 10.1038/s41583-019-0220-7  0.682
2019 Watabe-Uchida M, Uchida N. Multiple Dopamine Systems: Weal and Woe of Dopamine. Cold Spring Harbor Symposia On Quantitative Biology. PMID 30787046 DOI: 10.1101/sqb.2018.83.037648  0.538
2019 Uchida N, Robbe D. Decision letter: Distinct recruitment of dorsomedial and dorsolateral striatum erodes with extended training Elife. DOI: 10.7554/Elife.49536.027  0.307
2019 Uchida N, Kim H. The nature of dopamine signals during spatial navigation Ibro Reports. 6: S32-S33. DOI: 10.1016/j.ibror.2019.07.095  0.376
2018 Menegas W, Akiti K, Amo R, Uchida N, Watabe-Uchida M. Dopamine neurons projecting to the posterior striatum reinforce avoidance of threatening stimuli. Nature Neuroscience. PMID 30177795 DOI: 10.1038/S41593-018-0222-1  0.84
2018 Babayan BM, Uchida N, Gershman SJ. Belief state representation in the dopamine system. Nature Communications. 9: 1891. PMID 29760401 DOI: 10.1038/S41467-018-04397-0  0.841
2018 Starkweather CK, Gershman SJ, Uchida N. The Medial Prefrontal Cortex Shapes Dopamine Reward Prediction Errors under State Uncertainty. Neuron. PMID 29656872 DOI: 10.1016/J.Neuron.2018.03.036  0.828
2018 Kohl J, Babayan BM, Rubinstein ND, Autry AE, Marin-Rodriguez B, Kapoor V, Miyamishi K, Zweifel LS, Luo L, Uchida N, Dulac C. Functional circuit architecture underlying parental behaviour. Nature. PMID 29643503 DOI: 10.1038/S41586-018-0027-0  0.772
2018 Witten I, Uchida N. Decision letter: Rat behavior and dopamine release are modulated by conspecific distress Elife. DOI: 10.7554/Elife.38090.019  0.391
2017 Menegas W, Uchida N, Watabe-Uchida M. A Self-Killing Rabies Virus That Leaves a Trace on the DNA. Trends in Neurosciences. PMID 28890212 DOI: 10.1016/J.Tins.2017.08.005  0.766
2017 Watabe-Uchida M, Eshel N, Uchida N. Neural Circuitry of Reward Prediction Error. Annual Review of Neuroscience. PMID 28441114 DOI: 10.1146/Annurev-Neuro-072116-031109  0.775
2017 Mathis MW, Mathis A, Uchida N. Somatosensory Cortex Plays an Essential Role in Forelimb Motor Adaptation in Mice. Neuron. 93: 1493-1503.e6. PMID 28334611 DOI: 10.1016/J.Neuron.2017.02.049  0.725
2017 Starkweather CK, Babayan BM, Uchida N, Gershman SJ. Dopamine reward prediction errors reflect hidden-state inference across time. Nature Neuroscience. PMID 28263301 DOI: 10.1038/Nn.4520  0.825
2017 Uchida N, Cohen JY. Slow motion. Elife. 6. PMID 28193318 DOI: 10.7554/eLife.24792  0.622
2017 Menegas W, Babayan BM, Uchida N, Watabe-Uchida M. Opposite initialization to novel cues in dopamine signaling in ventral and posterior striatum in mice. Elife. 6. PMID 28054919 DOI: 10.7554/Elife.21886  0.818
2016 Matsumoto H, Tian J, Uchida N, Watabe-Uchida M. Midbrain dopamine neurons signal aversion in a reward-context-dependent manner. Elife. 5. PMID 27760002 DOI: 10.7554/Elife.17328  0.685
2016 Tian J, Huang R, Cohen JY, Osakada F, Kobak D, Machens CK, Callaway EM, Uchida N, Watabe-Uchida M. Distributed and Mixed Information in Monosynaptic Inputs to Dopamine Neurons. Neuron. PMID 27618675 DOI: 10.1016/J.Neuron.2016.08.018  0.773
2016 Kobak D, Brendel W, Constantinidis C, Feierstein CE, Kepecs A, Mainen ZF, Romo R, Qi XL, Uchida N, Machens CK. Demixed principal component analysis of neural population data. Elife. 5. PMID 27067378 DOI: 10.7554/eLife.10989  0.783
2016 Eshel N, Tian J, Bukwich M, Uchida N. Dopamine neurons share common response function for reward prediction error. Nature Neuroscience. PMID 26854803 DOI: 10.1038/Nn.4239  0.806
2016 Menegas W, Babayan BM, Uchida N, Watabe-Uchida M. Author response: Opposite initialization to novel cues in dopamine signaling in ventral and posterior striatum in mice Elife. DOI: 10.7554/Elife.21886.029  0.797
2016 Matsumoto H, Tian J, Uchida N, Watabe-Uchida M. Author response: Midbrain dopamine neurons signal aversion in a reward-context-dependent manner Elife. DOI: 10.7554/Elife.17328.021  0.66
2016 Kobak D, Brendel W, Constantinidis C, Feierstein CE, Kepecs A, Mainen ZF, Qi X, Romo R, Uchida N, Machens CK. Author response: Demixed principal component analysis of neural population data Elife. DOI: 10.7554/Elife.10989.022  0.758
2015 Eshel N, Bukwich M, Rao V, Hemmelder V, Tian J, Uchida N. Erratum: Arithmetic and local circuitry underlying dopamine prediction errors. Nature. PMID 26444234 DOI: 10.1038/Nature15718  0.745
2015 Tian J, Uchida N. Habenula Lesions Reveal that Multiple Mechanisms Underlie Dopamine Prediction Errors. Neuron. 87: 1304-16. PMID 26365765 DOI: 10.1016/J.Neuron.2015.08.028  0.651
2015 Eshel N, Bukwich M, Rao V, Hemmelder V, Tian J, Uchida N. Arithmetic and local circuitry underlying dopamine prediction errors. Nature. 525: 243-6. PMID 26322583 DOI: 10.1038/Nature14855  0.812
2015 Menegas W, Bergan JF, Ogawa SK, Isogai Y, Umadevi Venkataraju K, Osten P, Uchida N, Watabe-Uchida M. Dopamine neurons projecting to the posterior striatum form an anatomically distinct subclass. Elife. 4. PMID 26322384 DOI: 10.7554/Elife.10032  0.824
2015 Tian J, Uchida N. Monkeys in a prisoner's dilemma. Cell. 160: 1046-8. PMID 25768902 DOI: 10.1016/J.Cell.2015.02.049  0.546
2015 Cohen JY, Amoroso MW, Uchida N. Serotonergic neurons signal reward and punishment on multiple timescales. Elife. 4. PMID 25714923 DOI: 10.7554/eLife.06346  0.706
2015 Menegas W, Bergan JF, Ogawa SK, Isogai Y, Venkataraju KU, Osten P, Uchida N, Watabe-Uchida M. Author response: Dopamine neurons projecting to the posterior striatum form an anatomically distinct subclass Elife. DOI: 10.7554/Elife.10032.021  0.814
2015 Cohen JY, Amoroso MW, Uchida N. Author response: Serotonergic neurons signal reward and punishment on multiple timescales Elife. DOI: 10.7554/Elife.06346.023  0.686
2014 Ogawa SK, Cohen JY, Hwang D, Uchida N, Watabe-Uchida M. Organization of monosynaptic inputs to the serotonin and dopamine neuromodulatory systems. Cell Reports. 8: 1105-18. PMID 25108805 DOI: 10.1016/j.celrep.2014.06.042  0.701
2014 Uchida N, Poo C, Haddad R. Coding and transformations in the olfactory system. Annual Review of Neuroscience. 37: 363-85. PMID 24905594 DOI: 10.1146/Annurev-Neuro-071013-013941  0.797
2014 Krashes MJ, Shah BP, Madara JC, Olson DP, Strochlic DE, Garfield AS, Vong L, Pei H, Watabe-Uchida M, Uchida N, Liberles SD, Lowell BB. An excitatory paraventricular nucleus to AgRP neuron circuit that drives hunger. Nature. 507: 238-42. PMID 24487620 DOI: 10.1038/Nature12956  0.355
2013 Uchida N, Eshel N, Watabe-Uchida M. Division of labor for division: inhibitory interneurons with different spatial landscapes in the olfactory system. Neuron. 80: 1106-9. PMID 24314722 DOI: 10.1016/J.Neuron.2013.11.013  0.685
2013 Eshel N, Tian J, Uchida N. Opening the black box: dopamine, predictions, and learning. Trends in Cognitive Sciences. 17: 430-1. PMID 23830895 DOI: 10.1016/J.Tics.2013.06.010  0.805
2013 Haddad R, Lanjuin A, Madisen L, Zeng H, Murthy VN, Uchida N. Olfactory cortical neurons read out a relative time code in the olfactory bulb. Nature Neuroscience. 16: 949-57. PMID 23685720 DOI: 10.1038/Nn.3407  0.697
2013 Wang AY, Miura K, Uchida N. The dorsomedial striatum encodes net expected return, critical for energizing performance vigor. Nature Neuroscience. 16: 639-47. PMID 23584742 DOI: 10.1038/nn.3377  0.405
2013 Zariwala HA, Kepecs A, Uchida N, Hirokawa J, Mainen ZF. The limits of deliberation in a perceptual decision task. Neuron. 78: 339-51. PMID 23541901 DOI: 10.1016/j.neuron.2013.02.010  0.776
2012 Spors H, Albeanu DF, Murthy VN, Rinberg D, Uchida N, Wachowiak M, Friedrich RW. Illuminating vertebrate olfactory processing. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 14102-8. PMID 23055479 DOI: 10.1523/Jneurosci.3328-12.2012  0.618
2012 Miura K, Mainen ZF, Uchida N. Odor representations in olfactory cortex: distributed rate coding and decorrelated population activity. Neuron. 74: 1087-98. PMID 22726838 DOI: 10.1016/j.neuron.2012.04.021  0.771
2012 Watabe-Uchida M, Zhu L, Ogawa SK, Vamanrao A, Uchida N. Whole-brain mapping of direct inputs to midbrain dopamine neurons. Neuron. 74: 858-73. PMID 22681690 DOI: 10.1016/j.neuron.2012.03.017  0.458
2012 Cohen JY, Haesler S, Vong L, Lowell BB, Uchida N. Neuron-type-specific signals for reward and punishment in the ventral tegmental area. Nature. 482: 85-8. PMID 22258508 DOI: 10.1038/Nature10754  0.823
2010 Cury KM, Uchida N. Robust odor coding via inhalation-coupled transient activity in the mammalian olfactory bulb. Neuron. 68: 570-85. PMID 21040855 DOI: 10.1016/J.Neuron.2010.09.040  0.783
2009 Quirk MC, Sosulski DL, Feierstein CE, Uchida N, Mainen ZF. A defined network of fast-spiking interneurons in orbitofrontal cortex: responses to behavioral contingencies and ketamine administration. Frontiers in Systems Neuroscience. 3: 13. PMID 20057934 DOI: 10.3389/neuro.06.013.2009  0.788
2008 Kepecs A, Uchida N, Zariwala HA, Mainen ZF. Neural correlates, computation and behavioural impact of decision confidence. Nature. 455: 227-31. PMID 18690210 DOI: 10.1038/Nature07200  0.797
2007 Uchida N, Mainen ZF. Odor concentration invariance by chemical ratio coding. Frontiers in Systems Neuroscience. 1: 3. PMID 18958244 DOI: 10.3389/neuro.06.003.2007  0.742
2007 Kepecs A, Uchida N, Mainen ZF. Rapid and precise control of sniffing during olfactory discrimination in rats. Journal of Neurophysiology. 98: 205-13. PMID 17460109 DOI: 10.1152/jn.00071.2007  0.783
2006 Gurden H, Uchida N, Mainen ZF. Sensory-evoked intrinsic optical signals in the olfactory bulb are coupled to glutamate release and uptake. Neuron. 52: 335-45. PMID 17046695 DOI: 10.1016/j.neuron.2006.07.022  0.742
2006 Feierstein CE, Quirk MC, Uchida N, Sosulski DL, Mainen ZF. Representation of spatial goals in rat orbitofrontal cortex. Neuron. 51: 495-507. PMID 16908414 DOI: 10.1016/j.neuron.2006.06.032  0.789
2006 Uchida N, Kepecs A, Mainen ZF. Seeing at a glance, smelling in a whiff: rapid forms of perceptual decision making. Nature Reviews. Neuroscience. 7: 485-91. PMID 16715056 DOI: 10.1038/nrn1933  0.781
2006 Kepecs A, Uchida N, Mainen ZF. The sniff as a unit of olfactory processing. Chemical Senses. 31: 167-79. PMID 16339265 DOI: 10.1093/chemse/bjj016  0.791
2003 Uchida N, Mainen ZF. Speed and accuracy of olfactory discrimination in the rat. Nature Neuroscience. 6: 1224-9. PMID 14566341 DOI: 10.1038/nn1142  0.742
2000 Uchida N, Takahashi YK, Tanifuji M, Mori K. Odor maps in the mammalian olfactory bulb: domain organization and odorant structural features. Nature Neuroscience. 3: 1035-43. PMID 11017177 DOI: 10.1038/79857  0.459
2000 Manabe T, Togashi H, Uchida N, Suzuki SC, Hayakawa Y, Yamamoto M, Yoda H, Miyakawa T, Takeichi M, Chisaka O. Loss of cadherin-11 adhesion receptor enhances plastic changes in hippocampal synapses and modifies behavioral responses. Molecular and Cellular Neurosciences. 15: 534-46. PMID 10860580 DOI: 10.1006/Mcne.2000.0849  0.467
1999 Kashiwadani H, Sasaki YF, Uchida N, Mori K. Synchronized oscillatory discharges of mitral/tufted cells with different molecular receptive ranges in the rabbit olfactory bulb. Journal of Neurophysiology. 82: 1786-92. PMID 10515968 DOI: 10.1152/JN.1999.82.4.1786  0.491
1998 Watabe-Uchida M, Uchida N, Imamura Y, Nagafuchi A, Fujimoto K, Uemura T, Vermeulen S, van Roy F, Adamson ED, Takeichi M. alpha-Catenin-vinculin interaction functions to organize the apical junctional complex in epithelial cells. The Journal of Cell Biology. 142: 847-57. PMID 9700171 DOI: 10.1083/Jcb.142.3.847  0.43
1998 Kashiwadani H, Sasaki YF, Uchida N, Mori K. Synchronized oscillatory discharges of mitral/tufted cells with overlapping molecular receptive ranges in the rabbit olfactory bulb Neuroscience Research. 31: S206. DOI: 10.1016/S0168-0102(98)82274-8  0.454
1997 Takeichi M, Uemura T, Iwai Y, Uchida N, Inoue T, Tanaka T, Suzuki SC. Cadherins in Brain Patterning and Neural Network Formation Cold Spring Harbor Symposia On Quantitative Biology. 62: 505-510. DOI: 10.1101/Sqb.1997.062.01.057  0.462
1996 Uchida N, Honjo Y, Johnson KR, Wheelock MJ, Takeichi M. The catenin/cadherin adhesion system is localized in synaptic junctions bordering transmitter release zones. The Journal of Cell Biology. 135: 767-79. PMID 8909549 DOI: 10.1083/Jcb.135.3.767  0.441
1995 Kimura Y, Matsunami H, Inoue T, Shimamura K, Uchida N, Ueno T, Miyazaki T, Takeichi M. Cadherin-11 expressed in association with mesenchymal morphogenesis in the head, somite, and limb bud of early mouse embryos. Developmental Biology. 169: 347-58. PMID 7750650 DOI: 10.1006/Dbio.1995.1149  0.439
1994 Uchida N, Shimamura K, Miyatani S, Copeland NG, Gilbert DJ, Jenkins NA, Takeichi M. Mouse alpha N-catenin: two isoforms, specific expression in the nervous system, and chromosomal localization of the gene. Developmental Biology. 163: 75-85. PMID 8174789 DOI: 10.1006/Dbio.1994.1124  0.447
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